Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G14180 Arabidopsis lyrata HOM05D006256 ORTHO05D007833 2.4e-70 268.9 146 100.0
AT2G24090 Arabidopsis thaliana HOM05D006256 ORTHO05D007833 7.8e-66 253.8 146 94.5
Carub.0004s0326 Capsella rubella HOM05D006256 ORTHO05D007833 1.7e-65 252.7 146 94.5
CARHR118260 Cardamine hirsuta HOM05D006256 ORTHO05D007833 3.6e-63 245.0 146 90.4
Sp4g02990 Schrenkiella parvula HOM05D006256 ORTHO05D007833 1.4e-54 216.5 150 82.7
A09p56610 Brassica napus HOM05D006256 ORTHO05D007833 1.2e-53 213.4 150 82.7
BraA09t41052Z Brassica rapa HOM05D006256 ORTHO05D007833 1.2e-53 213.4 150 82.7
A04p18400 Brassica napus HOM05D006256 ORTHO05D007833 2.0e-53 212.6 150 81.3
BraA04t17452Z Brassica rapa HOM05D006256 ORTHO05D007833 2.0e-53 212.6 150 81.3
BcaC07g40961 Brassica carinata HOM05D006256 ORTHO05D007833 5.8e-53 211.1 150 82.0
BolC4t26923H Brassica oleracea HOM05D006256 ORTHO05D007833 9.9e-53 210.3 150 80.7
Thhalv10000362m.g Eutrema salsugineum HOM05D006256 ORTHO05D007833 2.2e-52 209.1 152 80.3
C04p53670 Brassica napus HOM05D006256 ORTHO05D007833 2.9e-52 208.8 150 80.7
C08p39560 Brassica napus HOM05D006256 ORTHO05D007833 4.9e-52 208.0 150 82.7
BolC8t51529H Brassica oleracea HOM05D006256 ORTHO05D007833 4.9e-52 208.0 150 82.7
Aa31LG7G12680 Aethionema arabicum HOM05D006256 ORTHO05D007833 5.6e-48 194.5 154 74.0
THA.LOC104803911 Tarenaya hassleriana HOM05D006256 ORTHO05D007833 2.3e-41 172.6 159 65.4
BcaC02g08498 Brassica carinata HOM05D006256 ORTHO05D007833 9.7e-40 167.2 150 68.7
Cpa.g.sc199.16 Carica papaya HOM05D006256 ORTHO05D007833 5.3e-38 161.4 135 67.4
Potri.018G102700 Populus trichocarpa HOM05D006256 ORTHO05D007833 6.9e-38 161.0 153 64.7
Sabra18G0088200 Salix brachista HOM05D006256 ORTHO05D007833 4.5e-37 158.3 152 65.8
Duzib187G1001 Durio zibethinus HOM05D006256 ORTHO05D007833 1.3e-36 156.8 150 63.3
COL.COLO4_05401 Corchorus olitorius HOM05D006256 ORTHO05D007833 5.0e-36 154.8 150 61.3
MBI15_g35737_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 8.5e-36 154.1 151 60.9
Thecc.09G154100 Theobroma cacao HOM05D006256 ORTHO05D007833 8.5e-36 154.1 150 61.3
Nn2g12458 Nelumbo nucifera HOM05D006256 ORTHO05D007833 2.5e-35 152.5 150 65.3
CiPaw.15G164300 Carya illinoinensis HOM05D006256 ORTHO05D007833 4.2e-35 151.8 143 62.9
Manes.14G113600 Manihot esculenta HOM05D006256 ORTHO05D007833 9.4e-35 150.6 153 60.8
EL10Ac8g18906 Beta vulgaris HOM05D006256 ORTHO05D007833 2.1e-34 149.4 111 76.6
Dinv43283 Davidia involucrata HOM05D006256 ORTHO05D007833 2.7e-34 149.1 110 73.6
TAR626G0939 Trochodendron aralioides HOM05D006256 ORTHO05D007833 3.6e-34 148.7 151 59.6
Hma1.2p1_1084F.1_g255300 Hydrangea macrophylla HOM05D006256 ORTHO05D007833 6.1e-34 147.9 150 60.0
Atru.chr7.353 Acer truncatum HOM05D006256 ORTHO05D007833 2.3e-33 146.0 151 60.9
TWI32G1056 Tripterygium wilfordii HOM05D006256 ORTHO05D007833 3.0e-33 145.6 153 57.5
CiPaw.16G106600 Carya illinoinensis HOM05D006256 ORTHO05D007833 3.9e-33 145.2 109 73.4
Aqoxy7G03320 Aquilegia oxysepala HOM05D006256 ORTHO05D007833 8.8e-33 144.1 154 61.7
ClCG06G012650 Citrullus lanatus HOM05D006256 ORTHO05D007833 8.8e-33 144.1 151 63.6
Haze_19139 Corylus avellana HOM05D006256 ORTHO05D007833 8.8e-33 144.1 154 60.4
MELO3C010199.2 Cucumis melo HOM05D006256 ORTHO05D007833 1.1e-32 143.7 151 64.2
Prupe.1G102100 Prunus persica HOM05D006256 ORTHO05D007833 1.1e-32 143.7 125 65.6
Gohir.D08G098900 Gossypium hirsutum HOM05D006256 ORTHO05D007833 1.5e-32 143.3 117 70.9
PGR102G0560 Punica granatum HOM05D006256 ORTHO05D007833 1.5e-32 143.3 154 56.5
Ciclev10009792m.g Citrus clementina HOM05D006256 ORTHO05D007833 1.9e-32 142.9 150 58.7
MD04G1052200 Malus domestica HOM05D006256 ORTHO05D007833 1.9e-32 142.9 110 68.2
Cfa020783 Carpinus fangiana HOM05D006256 ORTHO05D007833 2.5e-32 142.5 154 60.4
Gohir.A08G087800 Gossypium hirsutum HOM05D006256 ORTHO05D007833 2.5e-32 142.5 112 72.3
Sed0025015 Sechium edule HOM05D006256 ORTHO05D007833 2.5e-32 142.5 152 61.8
FAN17G2907 Fragaria x ananassa HOM05D006256 ORTHO05D007833 5.7e-32 141.4 109 68.8
FAN17G2911 Fragaria x ananassa HOM05D006256 ORTHO05D007833 5.7e-32 141.4 109 68.8
RcHm_v2.0_Chr4g0405501 Rosa chinensis HOM05D006256 ORTHO05D007833 5.7e-32 141.4 109 68.8
CsaV3_1G029200 Cucumis sativus L. HOM05D006256 ORTHO05D007833 7.4e-32 141.0 152 63.2
FAN07G0991 Fragaria x ananassa HOM05D006256 ORTHO05D007833 7.4e-32 141.0 109 68.8
TAR383G0166 Trochodendron aralioides HOM05D006256 ORTHO05D007833 7.4e-32 141.0 138 61.6
Gorai.004G106500 Gossypium raimondii HOM05D006256 ORTHO05D007833 9.7e-32 140.6 117 70.1
Lj4g0007171 Lotus japonicus HOM05D006256 ORTHO05D007833 1.3e-31 140.2 132 65.9
Psat7g006560 Pisum sativum HOM05D006256 ORTHO05D007833 1.7e-31 139.8 154 61.0
arahy.Tifrunner.gnm1.ann1.6DRS7R Arachis hypogaea HOM05D006256 ORTHO05D007833 2.2e-31 139.4 147 59.2
CDE02G1547 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 2.2e-31 139.4 154 61.0
CDE05G2121 Ceratophyllum demersum HOM05D006256 ORTHO05D007833 2.2e-31 139.4 154 58.4
CANSAT11G0095 Cannabis sativa HOM05D006256 ORTHO05D007833 3.7e-31 138.7 150 59.3
Cc06_g14490 Coffea canephora HOM05D006256 ORTHO05D007833 3.7e-31 138.7 113 68.1
FAN22G0392 Fragaria x ananassa HOM05D006256 ORTHO05D007833 3.7e-31 138.7 109 67.9
VMungo1215G1943 Vigna mungo HOM05D006256 ORTHO05D007833 3.7e-31 138.7 151 59.6
Actinidia38660 Actinidia chinensis HOM05D006256 ORTHO05D007833 4.8e-31 138.3 150 57.3
arahy.Tifrunner.gnm1.ann1.RJ4A7B Arachis hypogaea HOM05D006256 ORTHO05D007833 6.3e-31 137.9 147 58.5
AUR62025373 Chenopodium quinoa HOM05D006256 ORTHO05D007833 1.1e-30 137.1 111 70.3
MSTRG.10713 Avicennia marina HOM05D006256 ORTHO05D007833 1.8e-30 136.3 142 57.0
Eucgr.C02515 Eucalyptus grandis HOM05D006256 ORTHO05D007833 3.1e-30 135.6 148 58.1
CSS0035436 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 4.1e-30 135.2 109 67.9
HanXRQChr12g0357751 Helianthus annuus HOM05D006256 ORTHO05D007833 4.1e-30 135.2 108 69.4
Eucgr.L01548 Eucalyptus grandis HOM05D006256 ORTHO05D007833 5.3e-30 134.8 148 58.8
Glyma.02G206700 Glycine max HOM05D006256 ORTHO05D007833 5.3e-30 134.8 149 60.4
Medtr4g130300 Medicago truncatula HOM05D006256 ORTHO05D007833 5.3e-30 134.8 149 57.0
Phvul.003G153700 Phaseolus vulgaris HOM05D006256 ORTHO05D007833 5.3e-30 134.8 142 59.9
FvH4_4g09690 Fragaria vesca HOM05D006256 ORTHO05D007833 6.9e-30 134.4 147 57.1
HPP92_010352 Vanilla planifolia HOM05D006256 ORTHO05D007833 1.2e-29 133.7 151 55.6
Hund08959 Selenicereus undatus HOM05D006256 ORTHO05D007833 2.0e-29 132.9 112 71.4
SEGI_40166 Sequoiadendron giganteum HOM05D006256 ORTHO05D007833 2.0e-29 132.9 113 68.1
Oeu010284.1 Olea europaea HOM05D006256 ORTHO05D007833 2.6e-29 132.5 141 53.9
Glyma.17G071200 Glycine max HOM05D006256 ORTHO05D007833 3.4e-29 132.1 128 63.3
Solyc07g006000.3 Solanum lycopersicum HOM05D006256 ORTHO05D007833 4.5e-29 131.7 121 58.7
PGSC0003DMG400011211 Solanum tuberosum HOM05D006256 ORTHO05D007833 4.5e-29 131.7 121 58.7
SGA_v2.0_scaffold222G42778 Striga asiatica HOM05D006256 ORTHO05D007833 4.5e-29 131.7 151 55.0
vmacro06052 Vaccinium macrocarpon HOM05D006256 ORTHO05D007833 4.5e-29 131.7 150 56.0
Sopen07g002140 Solanum pennellii HOM05D006256 ORTHO05D007833 5.9e-29 131.3 121 58.7
ECA234G3762 Erigeron canadensis HOM05D006256 ORTHO05D007833 1.3e-28 130.2 108 67.6
Lsat_1_v5_gn_5_88481 Lactuca sativa HOM05D006256 ORTHO05D007833 1.3e-28 130.2 133 60.2
SalBow1G2070 Salvia bowleyana HOM05D006256 ORTHO05D007833 1.7e-28 129.8 123 60.2
Migut.K00301 Erythranthe guttata HOM05D006256 ORTHO05D007833 2.2e-28 129.4 148 54.7
AUR62028378 Chenopodium quinoa HOM05D006256 ORTHO05D007833 3.8e-28 128.6 153 58.8
Migut.J01392 Erythranthe guttata HOM05D006256 ORTHO05D007833 5.0e-28 128.3 108 65.7
Peaxi162Scf00563g00414 Petunia axillaris HOM05D006256 ORTHO05D007833 6.5e-28 127.9 149 51.7
Nitab4.5_0006744g0050 Nicotiana tabacum HOM05D006256 ORTHO05D007833 1.9e-27 126.3 149 51.7
Nitab4.5_0001036g0150 Nicotiana tabacum HOM05D006256 ORTHO05D007833 2.5e-27 125.9 149 51.7
PSO063G2398 Papaver somniferum HOM05D006256 ORTHO05D007833 2.5e-27 125.9 109 67.0
HanXRQChr10g0307761 Helianthus annuus HOM05D006256 ORTHO05D007833 3.2e-27 125.6 108 65.7
Zm00001eb386680 Zea mays HOM05D006256 ORTHO05D007833 9.4e-27 124.0 99 70.7
PSO170G3639 Papaver somniferum HOM05D006256 ORTHO05D007833 1.6e-26 123.2 154 53.9
CSS0023303 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 2.7e-26 122.5 78 80.8
Os06g0647100 Oryza sativa ssp. japonica HOM05D006256 ORTHO05D007833 3.6e-26 122.1 79 79.7
Gohir.A04G058552 Gossypium hirsutum HOM05D006256 ORTHO05D007833 4.7e-26 121.7 142 56.3
Lalb_Chr13g0300681 Lupinus albus HOM05D006256 ORTHO05D007833 1.4e-25 120.2 143 57.3
MBI15_g42789_MAGBIO Magnolia biondii HOM05D006256 ORTHO05D007833 3.9e-25 118.6 127 55.9
GSVIVG01012574001 Vitis vinifera HOM05D006256 ORTHO05D007833 2.0e-24 116.3 68 88.2
GSVIVG01012561001 Vitis vinifera HOM05D006256 ORTHO05D007833 7.4e-24 114.4 67 88.1
Dinv42817 Davidia involucrata HOM05D006256 ORTHO05D007833 1.1e-22 110.5 91 69.2
unitig_748.g7194 Utricularia gibba HOM05D006256 ORTHO05D007833 5.3e-22 108.2 154 50.6
Actinidia33300 Actinidia chinensis HOM05D006256 ORTHO05D007833 9.1e-22 107.5 103 61.2
Ah.09g228670 Amaranthus hybridus HOM05D006256 ORTHO05D007833 5.5e-19 98.2 184 41.3
Mapoly0027s0042 Marchantia polymorpha HOM05D006256 ORTHO05D007833 2.1e-18 96.3 67 74.6
QL02p094215 Quercus lobata HOM05D006256 ORTHO05D007833 2.7e-18 95.9 115 54.8
Rhsim03G0259400 Rhododendron simsii HOM05D006256 ORTHO05D007833 1.0e-17 94.0 92 56.5
ATR0580G126 Amborella trichopoda HOM05D006256 ORTHO05D007833 2.3e-17 92.8 85 68.2
CBR_g46223 Chara braunii HOM05D006256 ORTHO05D007833 3.9e-17 92.0 73 68.5
SMO164G0197 Selaginella moellendorffii HOM05D006256 ORTHO05D007833 8.8e-17 90.9 142 45.1
Pp3c22_13420 Physcomitrium patens HOM05D006256 ORTHO05D007833 5.7e-16 88.2 110 50.0
TPR.G24835 Trifolium pratense HOM05D006256 ORTHO05D007833 3.1e-14 82.4 127 48.0
CAN.G1190.22 Capsicum annuum HOM05D006256 ORTHO05D007833 4.5e-13 78.6 100 53.0
Pp3c21_8680 Physcomitrium patens HOM05D006256 ORTHO05D007833 1.9e-11 73.2 62 62.9
SGA_v2.0_scaffold12G06024 Striga asiatica HOM05D006256 ORTHO05D007833 3.0e-09 65.9 106 41.5
CSS0026373 Camellia sinensis var. sinensis HOM05D006256 ORTHO05D007833 7.5e-08 61.2 111 43.2
MCO09G536 Micromonas commoda HOM05D006256 ORTHO05D007833 1.3e-07 60.5 107 40.2
Pp3c21_8670 Physcomitrium patens HOM05D004684 ORTHO05D006904 2.2e-07 59.7 48 68.8
Zm00001eb000270 Zea mays HOM05D006256 ORTHO05D007833 1.1e-06 57.4 48 70.8
PRCOL_00001020 Prasinoderma coloniale HOM05D006256 ORTHO05D007833 3.1e-06 55.8 61 47.5


User provided reference genes

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