Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G14070 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 1.1e-93 346.7 181 100.0
AT2G24020 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 1.4e-88 329.7 183 95.6
Carub.0004s0318 Capsella rubella HOM05D004106 ORTHO05D004381 1.4e-83 313.2 186 89.8
CARHR184720 Cardamine hirsuta HOM05D004106 ORTHO05D004381 3.1e-80 302.0 187 89.3
Sp4g02930 Schrenkiella parvula HOM05D004106 ORTHO05D004381 6.5e-78 294.3 185 87.6
Thhalv10000343m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 1.5e-74 283.1 178 88.2
Aa31LG2G19880 Aethionema arabicum HOM05D004106 ORTHO05D004381 7.0e-72 274.2 187 81.8
THA.LOC104819993 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 1.2e-71 273.5 188 80.3
THA.LOC104803919 Tarenaya hassleriana HOM05D004106 ORTHO05D004381 2.0e-71 272.7 189 79.4
BcaC07g40965 Brassica carinata HOM05D004106 ORTHO05D004381 3.5e-71 271.9 186 83.3
C08p39590 Brassica napus HOM05D004106 ORTHO05D004381 1.7e-70 269.6 187 82.4
BolC8t51532H Brassica oleracea HOM05D004106 ORTHO05D004381 1.7e-70 269.6 187 82.4
BraA09t41055Z Brassica rapa HOM05D004106 ORTHO05D004381 1.7e-70 269.6 187 82.4
A09p56640 Brassica napus HOM05D004106 ORTHO05D004381 2.2e-70 269.2 187 82.4
Sp7g28490 Schrenkiella parvula HOM05D004106 ORTHO05D004381 4.2e-69 265.0 183 79.8
AT4G30620 Arabidopsis thaliana HOM05D004106 ORTHO05D004381 1.2e-68 263.5 183 79.8
AL7G21520 Arabidopsis lyrata HOM05D004106 ORTHO05D004381 6.1e-68 261.2 184 80.4
A08p19160 Brassica napus HOM05D004106 ORTHO05D004381 6.1e-68 261.2 186 78.5
BraA08t33877Z Brassica rapa HOM05D004106 ORTHO05D004381 1.4e-67 260.0 187 79.7
Carub.0007s0995 Capsella rubella HOM05D004106 ORTHO05D004381 1.8e-67 259.6 181 80.1
Thhalv10026346m.g Eutrema salsugineum HOM05D004106 ORTHO05D004381 2.3e-67 259.2 185 79.5
BcaB03g12652 Brassica carinata HOM05D004106 ORTHO05D004381 5.2e-67 258.1 178 78.7
BolC3t21168H Brassica oleracea HOM05D004106 ORTHO05D004381 1.2e-63 246.9 189 75.1
Aa31LG7G12810 Aethionema arabicum HOM05D004106 ORTHO05D004381 2.9e-62 242.3 209 69.4
Atru.chr7.22 Acer truncatum HOM05D004106 ORTHO05D004381 1.2e-60 236.9 188 70.7
C03p88620 Brassica napus HOM05D004106 ORTHO05D004381 1.2e-60 236.9 182 75.8
Cpa.g.sc46.167 Carica papaya HOM05D004106 ORTHO05D004381 6.1e-60 234.6 187 72.7
Potri.018G105600 Populus trichocarpa HOM05D004106 ORTHO05D004381 2.3e-59 232.6 167 74.9
Ciclev10009489m.g Citrus clementina HOM05D004106 ORTHO05D004381 3.0e-59 232.3 195 70.3
Manes.14G144700 Manihot esculenta HOM05D004106 ORTHO05D004381 1.7e-57 226.5 172 73.3
Actinidia14131 Actinidia chinensis HOM05D004106 ORTHO05D004381 3.7e-57 225.3 173 71.1
arahy.Tifrunner.gnm1.ann1.J1V5JT Arachis hypogaea HOM05D004106 ORTHO05D004381 3.7e-57 225.3 158 76.6
CiPaw.15G167000 Carya illinoinensis HOM05D004106 ORTHO05D004381 8.3e-57 224.2 158 77.8
ATR0580G427 Amborella trichopoda HOM05D004106 ORTHO05D004381 1.4e-56 223.4 194 68.0
QL02p093501 Quercus lobata HOM05D004106 ORTHO05D004381 1.4e-56 223.4 145 83.4
ECA240G3283 Erigeron canadensis HOM05D004106 ORTHO05D004381 5.3e-56 221.5 174 72.4
MD08G1056000 Malus domestica HOM05D004106 ORTHO05D004381 5.3e-56 221.5 150 78.7
Gohir.A05G053000 Gossypium hirsutum HOM05D004106 ORTHO05D004381 7.0e-56 221.1 186 68.3
Eucgr.C02535 Eucalyptus grandis HOM05D004106 ORTHO05D004381 9.1e-56 220.7 164 70.7
Glyma.06G225800 Glycine max HOM05D004106 ORTHO05D004381 9.1e-56 220.7 148 82.4
Gohir.A07G027300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 9.1e-56 220.7 186 68.3
Gorai.001G032700 Gossypium raimondii HOM05D004106 ORTHO05D004381 9.1e-56 220.7 186 68.3
Hund02987 Selenicereus undatus HOM05D004106 ORTHO05D004381 9.1e-56 220.7 148 80.4
Eucgr.C02498 Eucalyptus grandis HOM05D004106 ORTHO05D004381 1.2e-55 220.3 164 70.1
CSS0032495 Camellia sinensis var. sinensis HOM05D004106 ORTHO05D004381 1.6e-55 219.9 140 83.6
Duzib168G0532 Durio zibethinus HOM05D004106 ORTHO05D004381 2.7e-55 219.2 167 73.7
HanXRQChr03g0065371 Helianthus annuus HOM05D004106 ORTHO05D004381 2.7e-55 219.2 151 77.5
Oeu006863.1 Olea europaea HOM05D004106 ORTHO05D004381 2.7e-55 219.2 154 79.2
Phvul.005G005700 Phaseolus vulgaris HOM05D004106 ORTHO05D004381 2.7e-55 219.2 148 80.4
VMungo1080G0447 Vigna mungo HOM05D004106 ORTHO05D004381 2.7e-55 219.2 148 81.1
arahy.Tifrunner.gnm1.ann1.U84FQB Arachis hypogaea HOM05D004106 ORTHO05D004381 3.5e-55 218.8 140 82.9
Cc06_g14830 Coffea canephora HOM05D004106 ORTHO05D004381 3.5e-55 218.8 192 68.2
Dinv08223 Davidia involucrata HOM05D004106 ORTHO05D004381 3.5e-55 218.8 177 72.3
Glyma.12G156200 Glycine max HOM05D004106 ORTHO05D004381 3.5e-55 218.8 148 81.8
Gohir.D05G054601 Gossypium hirsutum HOM05D004106 ORTHO05D004381 5.9e-55 218.0 186 67.2
Gorai.009G056300 Gossypium raimondii HOM05D004106 ORTHO05D004381 5.9e-55 218.0 186 67.2
Prupe.1G394300 Prunus persica HOM05D004106 ORTHO05D004381 5.9e-55 218.0 150 80.0
Solyc08g006780.3 Solanum lycopersicum HOM05D004106 ORTHO05D004381 5.9e-55 218.0 168 72.6
TAR626G0743 Trochodendron aralioides HOM05D004106 ORTHO05D004381 5.9e-55 218.0 156 78.8
COL.COLO4_18821 Corchorus olitorius HOM05D004106 ORTHO05D004381 1.0e-54 217.2 145 79.3
CANSAT11G1220 Cannabis sativa HOM05D004106 ORTHO05D004381 1.3e-54 216.9 159 74.2
Migut.E01458 Erythranthe guttata HOM05D004106 ORTHO05D004381 1.7e-54 216.5 139 81.3
HanXRQChr09g0244601 Helianthus annuus HOM05D004106 ORTHO05D004381 1.7e-54 216.5 138 82.6
Ca_21133_v3 Cicer arietinum L. HOM05D004106 ORTHO05D004381 2.2e-54 216.1 157 75.8
Dinv08178 Davidia involucrata HOM05D004106 ORTHO05D004381 2.2e-54 216.1 153 77.8
Duzib150G0841 Durio zibethinus HOM05D004106 ORTHO05D004381 2.2e-54 216.1 148 82.4
RcHm_v2.0_Chr6g0299371 Rosa chinensis HOM05D004106 ORTHO05D004381 2.2e-54 216.1 148 78.4
EL10Ac2g02497 Beta vulgaris HOM05D004106 ORTHO05D004381 2.9e-54 215.7 163 70.6
FAN27G3303 Fragaria x ananassa HOM05D004106 ORTHO05D004381 2.9e-54 215.7 148 79.1
Medtr0380s0040 Medicago truncatula HOM05D004106 ORTHO05D004381 2.9e-54 215.7 139 82.0
PSO339G2511 Papaver somniferum HOM05D004106 ORTHO05D004381 2.9e-54 215.7 146 79.5
PSO384G4038 Papaver somniferum HOM05D004106 ORTHO05D004381 2.9e-54 215.7 146 79.5
Nitab4.5_0003563g0010 Nicotiana tabacum HOM05D004106 ORTHO05D004381 3.8e-54 215.3 151 77.5
HPP92_004701 Vanilla planifolia HOM05D004106 ORTHO05D004381 5.0e-54 214.9 167 70.7
GSVIVG01023623001 Vitis vinifera HOM05D004106 ORTHO05D004381 5.0e-54 214.9 144 81.2
FvH4_2g41160 Fragaria vesca HOM05D004106 ORTHO05D004381 6.5e-54 214.5 148 78.4
Lalb_Chr13g0300831 Lupinus albus HOM05D004106 ORTHO05D004381 6.5e-54 214.5 146 79.5
Nitab4.5_0002011g0110 Nicotiana tabacum HOM05D004106 ORTHO05D004381 1.1e-53 213.8 139 80.6
FAN15G2986 Fragaria x ananassa HOM05D004106 ORTHO05D004381 1.5e-53 213.4 148 78.4
MBI15_g18237_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 1.5e-53 213.4 159 74.2
Oeu048547.1 Olea europaea HOM05D004106 ORTHO05D004381 1.5e-53 213.4 164 74.4
Sopen08g002730 Solanum pennellii HOM05D004106 ORTHO05D004381 1.5e-53 213.4 167 71.9
CsaV3_1G029020 Cucumis sativus L. HOM05D004106 ORTHO05D004381 3.2e-53 212.2 145 79.3
PGSC0003DMG400026299 Solanum tuberosum HOM05D004106 ORTHO05D004381 5.5e-53 211.5 161 72.0
TAR383G0918 Trochodendron aralioides HOM05D004106 ORTHO05D004381 5.5e-53 211.5 182 67.0
Lj6g0027633 Lotus japonicus HOM05D004106 ORTHO05D004381 1.2e-52 210.3 146 76.7
Peaxi162Scf00045g02039 Petunia axillaris HOM05D004106 ORTHO05D004381 1.2e-52 210.3 139 81.3
Os02g0180200 Oryza sativa ssp. japonica HOM05D004106 ORTHO05D004381 1.6e-52 209.9 150 74.7
SGA_v2.0_scaffold4G02174 Striga asiatica HOM05D004106 ORTHO05D004381 2.1e-52 209.5 167 72.5
Psat1g022480 Pisum sativum HOM05D004106 ORTHO05D004381 3.6e-52 208.8 148 77.7
CAN.G551.46 Capsicum annuum HOM05D004106 ORTHO05D004381 6.1e-52 208.0 185 67.6
Lalb_Chr07g0179881 Lupinus albus HOM05D004106 ORTHO05D004381 6.1e-52 208.0 147 75.5
Peaxi162Scf00062g00225 Petunia axillaris HOM05D004106 ORTHO05D004381 6.1e-52 208.0 138 81.2
Prupe.7G264300 Prunus persica HOM05D004106 ORTHO05D004381 8.0e-52 207.6 168 70.2
PGR102G1248 Punica granatum HOM05D004106 ORTHO05D004381 8.0e-52 207.6 147 75.5
Solyc12g009980.2 Solanum lycopersicum HOM05D004106 ORTHO05D004381 8.0e-52 207.6 184 66.8
Lj4g0010746 Lotus japonicus HOM05D004106 ORTHO05D004381 1.0e-51 207.2 162 73.5
Hund25620 Selenicereus undatus HOM05D004106 ORTHO05D004381 1.4e-51 206.8 165 70.9
Sopen12g004850 Solanum pennellii HOM05D004106 ORTHO05D004381 1.4e-51 206.8 140 80.0
Migut.K00317 Erythranthe guttata HOM05D004106 ORTHO05D004381 1.8e-51 206.5 139 77.7
MBI14_g09102_MAGBIO Magnolia biondii HOM05D004106 ORTHO05D004381 1.8e-51 206.5 168 69.6
PGSC0003DMG400007906 Solanum tuberosum HOM05D004106 ORTHO05D004381 2.3e-51 206.1 184 66.3
ClCG06G012460 Citrullus lanatus HOM05D004106 ORTHO05D004381 3.0e-51 205.7 147 78.2
Zm00001eb206700 Zea mays HOM05D004106 ORTHO05D004381 3.0e-51 205.7 150 74.0
MSTRG.1632 Avicennia marina HOM05D004106 ORTHO05D004381 4.0e-51 205.3 141 79.4
CDE05G2988 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 4.0e-51 205.3 146 75.3
TWI63G0696 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 4.0e-51 205.3 157 73.2
TPR.G3593 Trifolium pratense HOM05D004106 ORTHO05D004381 6.8e-51 204.5 200 62.5
Lsat_1_v5_gn_7_50001 Lactuca sativa HOM05D004106 ORTHO05D004381 8.8e-51 204.1 178 66.9
vmacro06074 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 8.8e-51 204.1 152 71.1
CAN.G353.7 Capsicum annuum HOM05D004106 ORTHO05D004381 1.2e-50 203.8 161 70.8
unitig_749.g13818 Utricularia gibba HOM05D004106 ORTHO05D004381 1.5e-50 203.4 184 66.8
Aqoxy7G02464 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 2.0e-50 203.0 139 79.9
Manes.03G008200 Manihot esculenta HOM05D004106 ORTHO05D004381 2.0e-50 203.0 140 77.9
TWI34G1622 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 2.6e-50 202.6 150 73.3
Sed0000106 Sechium edule HOM05D004106 ORTHO05D004381 3.4e-50 202.2 147 76.9
TWI32G0932 Tripterygium wilfordii HOM05D004106 ORTHO05D004381 3.4e-50 202.2 186 65.6
Medtr4g130730 Medicago truncatula HOM05D004106 ORTHO05D004381 7.5e-50 201.1 160 70.6
CDE02G1701 Ceratophyllum demersum HOM05D004106 ORTHO05D004381 9.8e-50 200.7 146 74.0
BcaC01g01145 Brassica carinata HOM05D004106 ORTHO05D004381 1.7e-49 199.9 164 70.7
TPR.G24849 Trifolium pratense HOM05D004106 ORTHO05D004381 1.7e-49 199.9 141 76.6
MD15G1041000 Malus domestica HOM05D004106 ORTHO05D004381 6.3e-49 198.0 150 72.0
Actinidia23107 Actinidia chinensis HOM05D004106 ORTHO05D004381 1.1e-48 197.2 142 76.8
Ah.10g025490 Amaranthus hybridus HOM05D004106 ORTHO05D004381 1.8e-48 196.4 185 64.9
Aqoxy7G02301 Aquilegia oxysepala HOM05D004106 ORTHO05D004381 1.8e-48 196.4 115 88.7
Sabra18G0090100 Salix brachista HOM05D004106 ORTHO05D004381 3.1e-48 195.7 167 65.9
AUR62024802 Chenopodium quinoa HOM05D004106 ORTHO05D004381 4.1e-48 195.3 115 86.1
AUR62032418 Chenopodium quinoa HOM05D004106 ORTHO05D004381 4.1e-48 195.3 115 86.1
Cfa013048 Carpinus fangiana HOM05D004106 ORTHO05D004381 5.4e-48 194.9 113 89.4
Psat4g009640 Pisum sativum HOM05D004106 ORTHO05D004381 3.5e-47 192.2 146 70.5
Haze_21409 Corylus avellana HOM05D004106 ORTHO05D004381 5.9e-47 191.4 112 88.4
SalBow1G1642 Salvia bowleyana HOM05D004106 ORTHO05D004381 1.7e-46 189.9 145 71.7
Lalb_Chr12g0198731 Lupinus albus HOM05D004106 ORTHO05D004381 5.0e-46 188.3 113 85.0
Mapoly0031s0030 Marchantia polymorpha HOM05D004106 ORTHO05D004381 9.5e-45 184.1 136 66.9
vmacro05152 Vaccinium macrocarpon HOM05D004106 ORTHO05D004381 2.8e-44 182.6 176 60.8
Haze_19171 Corylus avellana HOM05D004106 ORTHO05D004381 3.0e-43 179.1 111 83.8
Pp3c2_35530 Physcomitrium patens HOM05D004106 ORTHO05D004381 4.4e-42 175.3 139 66.9
SMO364G0386 Selaginella moellendorffii HOM05D004106 ORTHO05D004381 2.2e-41 172.9 109 78.9
FAN20G0773 Fragaria x ananassa HOM05D004106 ORTHO05D004381 2.8e-41 172.6 148 66.9
Pp3c1_1160 Physcomitrium patens HOM05D004106 ORTHO05D004381 3.7e-41 172.2 139 66.2
MELO3C010214.2 Cucumis melo HOM05D004106 ORTHO05D004381 1.8e-40 169.9 124 74.2
Pp3c11_2360 Physcomitrium patens HOM05D004106 ORTHO05D004381 1.2e-39 167.2 143 61.5
CANSAT54G0776 Cannabis sativa HOM05D004106 ORTHO05D004381 4.5e-39 165.2 146 63.7
Nitab4.5_0002891g0090 Nicotiana tabacum HOM05D004106 ORTHO05D004381 2.3e-38 162.9 145 64.1
Nitab4.5_0008875g0050 Nicotiana tabacum HOM05D004106 ORTHO05D004381 2.3e-38 162.9 145 64.1
Thecc.09G028700 Theobroma cacao HOM05D004106 ORTHO05D004381 2.3e-38 162.9 115 75.7
CBR_g728 Chara braunii HOM05D004106 ORTHO05D004381 4.3e-37 158.7 113 71.7
CBR_g54183 Chara braunii HOM05D004106 ORTHO05D004381 5.6e-37 158.3 111 71.2
AagrBONN_evm.TU.Sc2ySwM_228.5744 Anthoceros agrestis HOM05D004106 ORTHO05D004381 1.2e-36 157.1 122 71.3
Zm00001eb234060 Zea mays HOM05D004106 ORTHO05D004381 4.7e-36 155.2 150 60.7
Nn8g39925 Nelumbo nucifera HOM05D004106 ORTHO05D004381 5.2e-35 151.8 153 60.8
Hma1.2p1_2680F.1_g326820 Hydrangea macrophylla HOM05D004106 ORTHO05D004381 6.8e-35 151.4 153 60.1
Sc09g0010670 Simmondsia chinensis HOM05D004106 ORTHO05D004381 2.6e-34 149.4 115 73.0
Rhsim07G0165600 Rhododendron simsii HOM05D004106 ORTHO05D004381 4.9e-33 145.2 292 37.0
PRCOL_00004350 Prasinoderma coloniale HOM05D004106 ORTHO05D004381 6.6e-30 134.8 109 61.5
Actinidia38669 Actinidia chinensis HOM05D004106 ORTHO05D004381 8.6e-30 134.4 132 59.8
BraA02t07117Z Brassica rapa HOM05D004106 ORTHO05D004381 1.3e-25 120.6 101 72.3
Cre10.g458550 Chlamydomonas reinhardtii HOM05D004106 ORTHO05D004381 1.7e-25 120.2 149 47.0
A02p20860 Brassica napus HOM05D004106 ORTHO05D004381 4.9e-25 118.6 96 74.0
C02p32810 Brassica napus HOM05D004106 ORTHO05D004381 1.9e-24 116.7 97 75.3
BcaB05g25007 Brassica carinata HOM05D004106 ORTHO05D004381 5.4e-24 115.2 91 72.5
BcaC03g15698 Brassica carinata HOM05D004106 ORTHO05D004381 1.2e-23 114.0 97 74.2
BolC2t09418H Brassica oleracea HOM05D004106 ORTHO05D004381 1.2e-23 114.0 97 74.2
Gohir.D07G031300 Gossypium hirsutum HOM05D004106 ORTHO05D004381 3.0e-22 109.4 118 56.8
QL02p018811 Quercus lobata HOM05D004106 ORTHO05D004381 9.5e-21 104.4 114 57.0
Peaxi162Scf00387g00211 Petunia axillaris HOM05D004106 ORTHO05D004381 1.9e-16 90.1 87 58.6
BcaB01g01386 Brassica carinata HOM05D004106 ORTHO05D005755 1.6e-15 87.0 49 91.8
CARHR238490 Cardamine hirsuta HOM05D004106 ORTHO05D004381 7.8e-15 84.7 47 89.4
SEGI_18679 Sequoiadendron giganteum HOM05D004106 ORTHO05D004381 7.3e-13 78.2 44 88.6
Lsat_1_v5_gn_7_47460 Lactuca sativa HOM05D004106 ORTHO05D002137 5.4e-08 62.0 38 81.6
AagrBONN_evm.TU.Sc2ySwM_114.14 Anthoceros agrestis HOM05D010958 ORTHO05D004381 3.9e-06 55.8 126 39.7
AagrBONN_evm.TU.Sc2ySwM_114.15 Anthoceros agrestis HOM05D010958 ORTHO05D004381 3.9e-06 55.8 126 39.7
AagrBONN_evm.TU.Sc2ySwM_368.15 Anthoceros agrestis HOM05D010958 ORTHO05D004381 3.9e-06 55.8 126 39.7
AagrBONN_evm.TU.Sc2ySwM_83.9 Anthoceros agrestis HOM05D010958 ORTHO05D004381 3.9e-06 55.8 126 39.7
AagrBONN_evm.TU.Sc2ySwM_344.958 Anthoceros agrestis HOM05D010958 ORTHO05D004381 6.6e-06 55.1 92 47.8


User provided reference genes

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