Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G13750 Arabidopsis lyrata HOM05D007898 ORTHO05D010010 1.1e-78 296.6 153 100.0
CARHR114600 Cardamine hirsuta HOM05D007898 ORTHO05D010010 4.8e-66 254.6 154 85.7
AT2G23755 Arabidopsis thaliana HOM05D007898 ORTHO05D010010 1.4e-65 253.1 156 85.9
Carub.0004s0293 Capsella rubella HOM05D007898 ORTHO05D010010 8.5e-63 243.8 153 82.4
Thhalv10000478m.g Eutrema salsugineum HOM05D007898 ORTHO05D010010 3.6e-61 238.4 192 68.8
THA.LOC104819816 Tarenaya hassleriana HOM05D007898 ORTHO05D010010 5.4e-49 198.0 166 62.7
A09p56800 Brassica napus HOM05D007898 ORTHO05D010010 1.6e-45 186.4 128 74.2
C08p39760 Brassica napus HOM05D007898 ORTHO05D010010 2.3e-44 182.6 128 72.7
BolC8t51548H Brassica oleracea HOM05D007898 ORTHO05D010010 2.3e-44 182.6 128 72.7
Cfa004248 Carpinus fangiana HOM05D007898 ORTHO05D010010 3.8e-39 165.2 170 51.8
Thecc.01G044100 Theobroma cacao HOM05D007898 ORTHO05D010010 6.6e-39 164.5 168 51.8
Gohir.A02G162400 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.1e-38 163.7 169 53.3
Gohir.D03G018100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.5e-38 163.3 169 52.7
Gohir.D04G029100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 3.3e-38 162.2 169 53.3
Gorai.012G033200 Gossypium raimondii HOM05D007898 ORTHO05D010010 9.5e-38 160.6 177 51.4
FvH4_1g14340 Fragaria vesca HOM05D007898 ORTHO05D010010 1.2e-37 160.2 164 57.9
RcHm_v2.0_Chr2g0103011 Rosa chinensis HOM05D007898 ORTHO05D010010 1.2e-37 160.2 164 53.7
FAN28G1054 Fragaria x ananassa HOM05D007898 ORTHO05D010010 2.1e-37 159.5 164 57.9
CiPaw.02G014000 Carya illinoinensis HOM05D007898 ORTHO05D010010 2.8e-37 159.1 167 50.9
Gohir.D04G023600 Gossypium hirsutum HOM05D007898 ORTHO05D010010 2.8e-37 159.1 174 51.7
QL06p044475 Quercus lobata HOM05D007898 ORTHO05D010010 3.6e-37 158.7 165 50.3
FAN23G0801 Fragaria x ananassa HOM05D007898 ORTHO05D010010 8.0e-37 157.5 164 57.3
Gohir.D04G023900 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.0e-36 157.1 177 50.8
TWI73G0930 Tripterygium wilfordii HOM05D007898 ORTHO05D010010 5.2e-36 154.8 158 53.8
PSO170G4740 Papaver somniferum HOM05D007898 ORTHO05D010010 2.6e-35 152.5 166 51.2
TPR.G31555 Trifolium pratense HOM05D007898 ORTHO05D010010 7.5e-35 151.0 156 53.8
Gohir.A05G386500 Gossypium hirsutum HOM05D007898 ORTHO05D010010 1.7e-34 149.8 169 50.9
MD15G1271500 Malus domestica HOM05D007898 ORTHO05D010010 1.7e-34 149.8 168 50.6
BraA09t41069Z Brassica rapa HOM05D007898 ORTHO05D010010 3.7e-34 148.7 119 66.4
Sabra07G0028800 Salix brachista HOM05D007898 ORTHO05D010010 2.4e-33 146.0 159 48.4
Manes.12G096600 Manihot esculenta HOM05D007898 ORTHO05D010010 5.4e-33 144.8 168 47.6
Potri.007G032900 Populus trichocarpa HOM05D007898 ORTHO05D010010 5.4e-33 144.8 159 48.4
GSVIVG01019045001 Vitis vinifera HOM05D007898 ORTHO05D010010 9.2e-33 144.1 165 49.1
CANSAT01G0863 Cannabis sativa HOM05D007898 ORTHO05D010010 1.6e-32 143.3 171 46.8
Sed0027812 Sechium edule HOM05D007898 ORTHO05D010010 2.7e-32 142.5 169 45.6
arahy.Tifrunner.gnm1.ann1.P18VIJ Arachis hypogaea HOM05D007898 ORTHO05D010010 3.5e-32 142.1 155 51.6
Prupe.7G146700 Prunus persica HOM05D007898 ORTHO05D010010 3.5e-32 142.1 174 48.9
PGR142G0285 Punica granatum HOM05D007898 ORTHO05D010010 1.7e-31 139.8 162 49.4
Eucgr.K01101 Eucalyptus grandis HOM05D007898 ORTHO05D010010 3.9e-31 138.7 167 49.1
TAR381G0528 Trochodendron aralioides HOM05D007898 ORTHO05D010010 8.6e-31 137.5 168 46.4
Oeu043831.1 Olea europaea HOM05D007898 ORTHO05D010010 1.1e-30 137.1 162 46.3
MELO3C007502.2 Cucumis melo HOM05D007898 ORTHO05D010010 1.5e-30 136.7 170 42.9
CsaV3_6G042630 Cucumis sativus L. HOM05D007898 ORTHO05D010010 1.5e-30 136.7 172 42.4
ClCG01G016310 Citrullus lanatus HOM05D007898 ORTHO05D010010 2.1e-29 132.9 171 41.5
Sopen02g034650 Solanum pennellii HOM05D007898 ORTHO05D010010 4.7e-29 131.7 151 49.7
Gorai.003G018300 Gossypium raimondii HOM05D007898 ORTHO05D010010 4.0e-28 128.6 175 46.9
Nitab4.5_0004932g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 4.0e-28 128.6 151 48.3
ATR0053G039 Amborella trichopoda HOM05D007898 ORTHO05D010010 6.8e-28 127.9 158 48.7
PGSC0003DMG400010085 Solanum tuberosum HOM05D007898 ORTHO05D010010 8.9e-28 127.5 154 50.0
CSS0004703 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 1.2e-27 127.1 175 43.4
CSS0023760 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 1.2e-27 127.1 174 43.7
Hma1.2p1_0261F.1_g104820 Hydrangea macrophylla HOM05D007898 ORTHO05D010010 2.0e-27 126.3 151 47.0
Dinv26786 Davidia involucrata HOM05D007898 ORTHO05D010010 7.5e-27 124.4 122 55.7
CAN.G836.11 Capsicum annuum HOM05D007898 ORTHO05D010010 9.8e-27 124.0 151 47.7
Peaxi162Scf00535g00419 Petunia axillaris HOM05D007898 ORTHO05D010010 3.7e-26 122.1 180 42.8
Ah.03g142230 Amaranthus hybridus HOM05D007898 ORTHO05D010010 4.9e-26 121.7 151 47.0
arahy.Tifrunner.gnm1.ann1.376QVY Arachis hypogaea HOM05D007898 ORTHO05D010010 8.3e-26 120.9 115 57.4
Nn1g05126 Nelumbo nucifera HOM05D007898 ORTHO05D010010 1.9e-25 119.8 169 45.0
Solyc02g089960.3 Solanum lycopersicum HOM05D007898 ORTHO05D010010 1.9e-25 119.8 149 47.7
Migut.K00847 Erythranthe guttata HOM05D007898 ORTHO05D010010 3.2e-25 119.0 153 45.1
Nitab4.5_0000483g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 3.2e-25 119.0 151 45.7
FAN26G2880 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.6e-24 116.7 133 54.1
AUR62008035 Chenopodium quinoa HOM05D007898 ORTHO05D010010 6.0e-24 114.8 116 50.9
Cc07_g05300 Coffea canephora HOM05D007898 ORTHO05D010010 7.8e-24 114.4 146 47.9
Ciclev10027359m.g Citrus clementina HOM05D007898 ORTHO05D010010 6.6e-23 111.3 125 49.6
SalBow1G4022 Salvia bowleyana HOM05D007898 ORTHO05D010010 5.6e-22 108.2 143 43.4
Lj7P13T39 Lonicera japonica HOM05D007898 ORTHO05D010010 1.2e-21 107.1 124 47.6
AUR62003213 Chenopodium quinoa HOM05D007898 ORTHO05D010010 1.6e-21 106.7 108 51.9
SHI08702 Sapria himalayana HOM05D007898 ORTHO05D010010 3.6e-21 105.5 112 54.5
CDE02G3439 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 1.5e-19 100.1 146 42.5
SEGI_13764 Sequoiadendron giganteum HOM05D007898 ORTHO05D010010 4.4e-19 98.6 108 51.9
EL10Ac6g14865 Beta vulgaris HOM05D007898 ORTHO05D010010 7.5e-19 97.8 111 50.5
Haze_15152 Corylus avellana HOM05D007898 ORTHO05D010010 4.9e-18 95.1 159 39.6
Hund14127 Selenicereus undatus HOM05D007898 ORTHO05D010010 1.1e-14 84.0 165 36.4
SGA_v2.0_scaffold62G21534 Striga asiatica HOM05D007898 ORTHO05D010010 9.5e-14 80.9 130 41.5
Actinidia30992 Actinidia chinensis HOM05D007898 ORTHO05D010010 3.6e-13 79.0 171 37.4
FAN19G2518 Fragaria x ananassa HOM05D007898 ORTHO05D010010 2.3e-12 76.3 93 53.8
Lj4g0012479 Lotus japonicus HOM05D007898 ORTHO05D010010 2.6e-11 72.8 102 45.1
TAR374G1689 Trochodendron aralioides HOM05D007898 ORTHO05D010010 4.4e-11 72.0 83 49.4
CDE02G3192 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 3.3e-06 55.8 123 35.0


User provided reference genes

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