Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G13660 Arabidopsis lyrata HOM05D007578 ORTHO05D009497 2.0e-65 252.7 168 100.0
AT2G23670 Arabidopsis thaliana HOM05D007578 ORTHO05D009497 3.4e-57 225.3 168 92.9
CARHR114700 Cardamine hirsuta HOM05D007578 ORTHO05D009497 1.6e-54 216.5 168 88.1
Carub.0004s0288 Capsella rubella HOM05D007578 ORTHO05D009497 1.1e-52 210.3 169 89.9
A04p18050 Brassica napus HOM05D007578 ORTHO05D009497 2.4e-50 202.6 163 89.0
C04p52990 Brassica napus HOM05D007578 ORTHO05D009497 3.1e-50 202.2 163 88.3
BolC4t26860H Brassica oleracea HOM05D007578 ORTHO05D009497 3.1e-50 202.2 163 88.3
BraA04t17423Z Brassica rapa HOM05D007578 ORTHO05D009497 3.1e-50 202.2 163 88.3
Sp4g02640 Schrenkiella parvula HOM05D007578 ORTHO05D009497 1.0e-48 197.2 164 86.0
BcaB06g27923 Brassica carinata HOM05D007578 ORTHO05D009497 1.2e-46 190.3 163 85.9
Thhalv10000353m.g Eutrema salsugineum HOM05D007578 ORTHO05D009497 1.0e-45 187.2 169 82.8
Aa31LG7G13200 Aethionema arabicum HOM05D007578 ORTHO05D009497 1.9e-39 166.4 167 76.6
THA.LOC104804219 Tarenaya hassleriana HOM05D007578 ORTHO05D009497 4.2e-31 138.7 175 68.6
QL06p044247 Quercus lobata HOM05D007578 ORTHO05D009497 4.4e-28 128.6 157 66.2
Hma1.2p1_0261F.1_g104930 Hydrangea macrophylla HOM05D007578 ORTHO05D009497 7.0e-26 121.3 143 67.8
Manes.13G132100 Manihot esculenta HOM05D007578 ORTHO05D009497 5.0e-24 115.2 170 64.7
Thecc.01G045800 Theobroma cacao HOM05D007578 ORTHO05D009497 1.5e-23 113.6 170 61.8
COL.COLO4_22180 Corchorus olitorius HOM05D007578 ORTHO05D009497 1.9e-23 113.2 178 60.1
Migut.H00501 Erythranthe guttata HOM05D007578 ORTHO05D009497 3.2e-23 112.5 166 57.2
Ciclev10026636m.g Citrus clementina HOM05D007578 ORTHO05D009497 1.0e-21 107.5 166 53.6
Psat0s4627g0160 Pisum sativum HOM05D007578 ORTHO05D009497 1.4e-21 107.1 120 70.8
TPR.G29848 Trifolium pratense HOM05D007578 ORTHO05D009497 1.4e-21 107.1 157 58.0
Duzib264G1198 Durio zibethinus HOM05D007578 ORTHO05D009497 1.8e-21 106.7 169 57.4
Cpa.g.sc15.63 Carica papaya HOM05D007578 ORTHO05D009497 3.0e-21 105.9 152 59.2
Glyma.11G060900 Glycine max HOM05D007578 ORTHO05D009497 3.0e-21 105.9 126 71.4
Haze_15166 Corylus avellana HOM05D007578 ORTHO05D009497 6.8e-21 104.8 175 58.9
Sabra07G0029900 Salix brachista HOM05D007578 ORTHO05D009497 6.8e-21 104.8 154 63.6
Ca_24809_v3 Cicer arietinum L. HOM05D007578 ORTHO05D009497 1.2e-20 104.0 122 65.6
TAR628G0552 Trochodendron aralioides HOM05D007578 ORTHO05D009497 1.2e-20 104.0 171 58.5
CSS0031523 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 1.5e-20 103.6 171 57.3
CSS0032257 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 1.5e-20 103.6 171 57.3
Lsat_1_v5_gn_3_94000 Lactuca sativa HOM05D007578 ORTHO05D009497 1.5e-20 103.6 161 60.9
Duzib147G1180 Durio zibethinus HOM05D007578 ORTHO05D009497 5.7e-20 101.7 175 58.9
TAR376G0355 Trochodendron aralioides HOM05D007578 ORTHO05D009497 5.7e-20 101.7 160 58.1
Potri.007G034300 Populus trichocarpa HOM05D007578 ORTHO05D009497 1.3e-19 100.5 154 62.3
Sc03g0001220 Simmondsia chinensis HOM05D007578 ORTHO05D009497 1.3e-19 100.5 168 51.8
DCAR_010946 Daucus carota HOM05D007578 ORTHO05D009497 2.8e-19 99.4 159 57.9
Lj4P136T24 Lonicera japonica HOM05D007578 ORTHO05D009497 2.8e-19 99.4 130 65.4
SGA_v2.0_scaffold15G07205 Striga asiatica HOM05D007578 ORTHO05D009497 4.9e-19 98.6 151 62.9
Cc07_g05400 Coffea canephora HOM05D007578 ORTHO05D009497 8.3e-19 97.8 175 57.1
Glyma.01G182600 Glycine max HOM05D007578 ORTHO05D009497 1.1e-18 97.4 153 61.4
Lalb_Chr16g0378091 Lupinus albus HOM05D007578 ORTHO05D009497 1.1e-18 97.4 129 65.1
Lalb_Chr16g0378311 Lupinus albus HOM05D007578 ORTHO05D009497 1.1e-18 97.4 129 65.1
Medtr5g018590 Medicago truncatula HOM05D007578 ORTHO05D009497 1.1e-18 97.4 122 65.6
Oeu032922.1 Olea europaea HOM05D007578 ORTHO05D009497 1.1e-18 97.4 175 57.1
Peaxi162Scf00535g00071 Petunia axillaris HOM05D007578 ORTHO05D009497 1.1e-18 97.4 149 59.7
PGSC0003DMG400037576 Solanum tuberosum HOM05D007578 ORTHO05D009497 1.1e-18 97.4 150 60.0
Gohir.A02G161500 Gossypium hirsutum HOM05D007578 ORTHO05D009497 1.4e-18 97.1 137 59.1
Phvul.002G023600 Phaseolus vulgaris HOM05D007578 ORTHO05D009497 1.8e-18 96.7 148 64.2
CAN.G836.20 Capsicum annuum HOM05D007578 ORTHO05D009497 2.4e-18 96.3 121 71.1
Nitab4.5_0000108g0140 Nicotiana tabacum HOM05D007578 ORTHO05D009497 2.4e-18 96.3 156 60.3
Actinidia36527 Actinidia chinensis HOM05D007578 ORTHO05D009497 4.1e-18 95.5 151 60.3
Gorai.003G019400 Gossypium raimondii HOM05D007578 ORTHO05D009497 5.4e-18 95.1 137 59.9
CANSAT01G2356 Cannabis sativa HOM05D007578 ORTHO05D009497 7.0e-18 94.7 138 68.1
Gohir.A11G045100 Gossypium hirsutum HOM05D007578 ORTHO05D009497 7.0e-18 94.7 179 55.3
ClCG02G013060 Citrullus lanatus HOM05D007578 ORTHO05D009497 9.2e-18 94.4 157 59.2
Nitab4.5_0007463g0020 Nicotiana tabacum HOM05D007578 ORTHO05D009497 1.2e-17 94.0 156 59.6
CiPaw.01G029100 Carya illinoinensis HOM05D007578 ORTHO05D009497 2.0e-17 93.2 176 55.1
CDE11G1131 Ceratophyllum demersum HOM05D007578 ORTHO05D009497 2.7e-17 92.8 117 60.7
Gohir.D11G048600 Gossypium hirsutum HOM05D007578 ORTHO05D009497 3.5e-17 92.4 179 54.7
Gorai.007G052200 Gossypium raimondii HOM05D007578 ORTHO05D009497 3.5e-17 92.4 179 54.2
Rhsim06G0070400 Rhododendron simsii HOM05D002920 ORTHO05D009497 5.9e-17 91.7 137 63.5
Sopen02g034790 Solanum pennellii HOM05D007578 ORTHO05D009497 5.9e-17 91.7 156 57.1
MSTRG.23805 Avicennia marina HOM05D007578 ORTHO05D009497 7.7e-17 91.3 128 64.1
Solyc02g090100.1 Solanum lycopersicum HOM05D007578 ORTHO05D009497 7.7e-17 91.3 156 57.7
MD02G1158500 Malus domestica HOM05D007578 ORTHO05D009497 1.3e-16 90.5 146 62.3
MELO3C020917.2 Cucumis melo HOM05D007578 ORTHO05D009497 2.3e-16 89.7 135 63.7
AUR62027241 Chenopodium quinoa HOM05D003724 ORTHO05D009497 6.6e-16 88.2 128 67.2
TWI53G0440 Tripterygium wilfordii HOM05D007578 ORTHO05D009497 6.6e-16 88.2 153 58.8
Sed0003773 Sechium edule HOM05D007578 ORTHO05D009497 1.1e-15 87.4 175 55.4
arahy.Tifrunner.gnm1.ann1.UX6CPD Arachis hypogaea HOM05D007578 ORTHO05D009497 1.9e-15 86.7 141 61.0
arahy.Tifrunner.gnm1.ann1.25C3YR Arachis hypogaea HOM05D007578 ORTHO05D009497 4.3e-15 85.5 141 60.3
EL10Ac6g14844 Beta vulgaris HOM05D007578 ORTHO05D009497 4.3e-15 85.5 138 56.5
CsaV3_2G017140 Cucumis sativus L. HOM05D007578 ORTHO05D009497 9.5e-15 84.3 157 57.3
Gohir.D03G019000 Gossypium hirsutum HOM05D007578 ORTHO05D009497 1.6e-14 83.6 128 59.4
HanXRQChr12g0378461 Helianthus annuus HOM05D007578 ORTHO05D009497 1.6e-14 83.6 139 42.4
MD15G1273300 Malus domestica HOM05D007578 ORTHO05D009497 2.8e-14 82.8 141 59.6
MBI07_g23234_MAGBIO Magnolia biondii HOM05D007578 ORTHO05D009497 6.1e-14 81.6 140 61.4
Atru.chr3.471 Acer truncatum HOM05D007578 ORTHO05D009497 1.0e-13 80.9 137 58.4
Prupe.7G145300 Prunus persica HOM05D007578 ORTHO05D009497 1.8e-13 80.1 144 59.7
SalBow1G1613 Salvia bowleyana HOM05D007578 ORTHO05D009497 2.3e-13 79.7 121 60.3
Dinv26776 Davidia involucrata HOM05D007578 ORTHO05D009497 3.0e-13 79.3 145 53.8
FvH4_1g14510 Fragaria vesca HOM05D007578 ORTHO05D009497 4.0e-13 79.0 132 56.8
FAN26G3047 Fragaria x ananassa HOM05D007578 ORTHO05D009497 5.2e-13 78.6 132 56.8
FAN23G2171 Fragaria x ananassa HOM05D007578 ORTHO05D009497 6.8e-13 78.2 134 56.7
PGR102G1240 Punica granatum HOM05D007578 ORTHO05D009497 8.9e-13 77.8 151 56.3
Ah.03g142130 Amaranthus hybridus HOM05D007578 ORTHO05D009497 1.2e-12 77.4 165 49.7
Dinv39922 Davidia involucrata HOM05D007578 ORTHO05D009497 1.5e-12 77.0 222 43.2
FAN19G1163 Fragaria x ananassa HOM05D007578 ORTHO05D009497 2.4e-10 69.7 139 56.1
Aqoxy2G01906 Aquilegia oxysepala HOM05D007578 ORTHO05D009497 5.4e-10 68.6 137 56.9
unitig_21.g20937 Utricularia gibba HOM05D000261 ORTHO05D001168 5.4e-10 68.6 116 58.6
Peaxi162Scf00150g00132 Petunia axillaris HOM05D007578 ORTHO05D009497 7.0e-10 68.2 100 69.0
RcHm_v2.0_Chr2g0103251 Rosa chinensis HOM05D007578 ORTHO05D009497 2.0e-09 66.6 148 54.1
ECA246G0471 Erigeron canadensis HOM05D007578 ORTHO05D009497 3.5e-09 65.9 109 64.2
FAN28G2485 Fragaria x ananassa HOM05D007578 ORTHO05D009497 4.6e-09 65.5 94 67.0
PSO017G5052 Papaver somniferum HOM05D007578 ORTHO05D009497 7.8e-09 64.7 126 61.1
PSO170G5738 Papaver somniferum HOM05D007578 ORTHO05D009497 7.8e-09 64.7 180 50.0
HPP92_014833 Vanilla planifolia HOM05D007578 ORTHO05D009497 1.0e-08 64.3 120 47.5
ATR0787G067 Amborella trichopoda HOM05D007578 ORTHO05D009497 3.3e-07 59.3 166 42.8
TWI09G1014 Tripterygium wilfordii HOM05D007578 ORTHO05D009497 4.3e-07 58.9 82 79.3
CAN.G1525.2 Capsicum annuum HOM05D007578 ORTHO05D009497 5.6e-07 58.5 161 44.7


User provided reference genes

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