Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G13300 Arabidopsis lyrata HOM05D006686 ORTHO05D008463 4.0e-281 970.7 469 100.0
Carub.0004s0259 Capsella rubella HOM05D006686 ORTHO05D008463 3.7e-266 921.0 470 94.9
AT2G23390 Arabidopsis thaliana HOM05D006686 ORTHO05D008463 3.4e-264 914.4 470 93.0
Sp6g11350 Schrenkiella parvula HOM05D006686 ORTHO05D008463 8.8e-252 873.2 469 89.6
Sp4g17050 Schrenkiella parvula HOM05D006686 ORTHO05D008463 2.0e-248 862.1 469 88.3
BraA03t11965Z Brassica rapa HOM05D006686 ORTHO05D008463 5.3e-241 837.4 471 87.3
BcaC01g04848 Brassica carinata HOM05D006686 ORTHO05D008463 4.5e-240 834.3 471 87.3
BolC3t15644H Brassica oleracea HOM05D006686 ORTHO05D008463 4.5e-240 834.3 471 87.3
C03p33220 Brassica napus HOM05D006686 ORTHO05D008463 8.5e-239 830.1 471 86.8
BcaB01g02944 Brassica carinata HOM05D006686 ORTHO05D008463 3.0e-236 821.6 470 86.2
A03p27520 Brassica napus HOM05D006686 ORTHO05D008463 5.7e-235 817.4 502 81.7
Aa31LG3G6890 Aethionema arabicum HOM05D006686 ORTHO05D008463 6.3e-234 813.9 449 85.5
Thhalv10013635m.g Eutrema salsugineum HOM05D006686 ORTHO05D008463 1.1e-233 813.1 428 91.4
THA.LOC104809035 Tarenaya hassleriana HOM05D006686 ORTHO05D008463 5.6e-214 747.7 470 77.4
Gorai.011G003800 Gossypium raimondii HOM05D006686 ORTHO05D008463 4.0e-204 714.9 470 72.1
Gohir.D10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 1.5e-203 713.0 470 71.9
Cfa004450 Carpinus fangiana HOM05D006686 ORTHO05D008463 1.7e-202 709.5 469 73.6
Gohir.A10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 6.4e-202 707.6 470 71.5
Manes.07G028500 Manihot esculenta HOM05D006686 ORTHO05D008463 6.6e-199 697.6 470 71.7
QL02p103152 Quercus lobata HOM05D006686 ORTHO05D008463 1.5e-198 696.4 470 72.3
COL.COLO4_26876 Corchorus olitorius HOM05D006686 ORTHO05D008463 1.9e-198 696.0 477 70.9
Thecc.06G000500 Theobroma cacao HOM05D006686 ORTHO05D008463 1.9e-198 696.0 469 71.6
Duzib235G0699 Durio zibethinus HOM05D006686 ORTHO05D008463 2.5e-198 695.7 469 71.2
Prupe.1G584700 Prunus persica HOM05D006686 ORTHO05D008463 3.3e-198 695.3 492 70.7
Potri.004G228500 Populus trichocarpa HOM05D006686 ORTHO05D008463 3.1e-196 688.7 471 70.7
Sabra01G0173400 Salix brachista HOM05D006686 ORTHO05D008463 1.5e-195 686.4 467 69.6
GSVIVG01023154001 Vitis vinifera HOM05D006686 ORTHO05D008463 7.5e-195 684.1 472 69.7
MD08G1247400 Malus domestica HOM05D006686 ORTHO05D008463 1.7e-194 682.9 477 70.9
MELO3C016473.2 Cucumis melo HOM05D006686 ORTHO05D008463 4.9e-194 681.4 468 71.2
ClCG10G007390 Citrullus lanatus HOM05D006686 ORTHO05D008463 1.4e-193 679.9 471 70.3
CsaV3_3G006630 Cucumis sativus L. HOM05D006686 ORTHO05D008463 3.2e-193 678.7 468 70.7
Nn5g27352 Nelumbo nucifera HOM05D006686 ORTHO05D008463 5.4e-193 677.9 438 72.8
CANSAT01G1449 Cannabis sativa HOM05D006686 ORTHO05D008463 3.5e-192 675.2 472 69.9
PGR042G1861 Punica granatum HOM05D006686 ORTHO05D008463 4.6e-192 674.9 436 73.4
TAR381G1724 Trochodendron aralioides HOM05D006686 ORTHO05D008463 7.8e-192 674.1 460 70.7
TWI59G1206 Tripterygium wilfordii HOM05D006686 ORTHO05D008463 1.9e-190 669.5 469 69.7
Dinv29673 Davidia involucrata HOM05D006686 ORTHO05D008463 2.5e-190 669.1 483 67.7
MBI03_g20875_MAGBIO Magnolia biondii HOM05D006686 ORTHO05D008463 2.8e-189 665.6 461 69.2
FvH4_5g27990 Fragaria vesca HOM05D006686 ORTHO05D008463 6.2e-189 664.5 472 68.6
HanXRQChr01g0013991 Helianthus annuus HOM05D006686 ORTHO05D008463 1.8e-188 662.9 468 66.7
FAN04G2541 Fragaria x ananassa HOM05D006686 ORTHO05D008463 5.2e-188 661.4 473 68.1
FAN18G1657 Fragaria x ananassa HOM05D006686 ORTHO05D008463 1.5e-187 659.8 477 68.1
vmacro19835 Vaccinium macrocarpon HOM05D006686 ORTHO05D008463 1.1e-185 653.7 438 70.3
CSS0008654 Camellia sinensis var. sinensis HOM05D006686 ORTHO05D008463 5.4e-185 651.4 443 70.2
ECA236G4971 Erigeron canadensis HOM05D006686 ORTHO05D008463 7.8e-184 647.5 431 71.0
Eucgr.G00081 Eucalyptus grandis HOM05D006686 ORTHO05D008463 7.8e-184 647.5 481 67.4
Migut.B00728 Erythranthe guttata HOM05D006686 ORTHO05D008463 3.3e-182 642.1 446 68.4
Ah.03g136810 Amaranthus hybridus HOM05D006686 ORTHO05D008463 4.3e-182 641.7 471 65.4
Lj4g0021342 Lotus japonicus HOM05D006686 ORTHO05D008463 5.6e-182 641.3 432 69.7
ATR1089G117 Amborella trichopoda HOM05D006686 ORTHO05D008463 7.3e-182 641.0 442 69.2
Lsat_1_v5_gn_7_75180 Lactuca sativa HOM05D006686 ORTHO05D008463 9.6e-182 640.6 469 66.1
DCAR_022282 Daucus carota HOM05D006686 ORTHO05D008463 1.4e-180 636.7 437 69.3
MSTRG.16472 Avicennia marina HOM05D006686 ORTHO05D008463 6.9e-180 634.4 466 64.8
SGA_v2.0_scaffold254G45251 Striga asiatica HOM05D006686 ORTHO05D008463 6.9e-180 634.4 449 67.0
Cc02_g23500 Coffea canephora HOM05D006686 ORTHO05D008463 9.9e-179 630.6 429 69.0
Nitab4.5_0001129g0010 Nicotiana tabacum HOM05D006686 ORTHO05D008463 6.4e-178 627.9 430 69.5
CDE04G2622 Ceratophyllum demersum HOM05D006686 ORTHO05D008463 8.4e-178 627.5 462 65.4
Os04g0442200 Oryza sativa ssp. japonica HOM05D006686 ORTHO05D008463 7.1e-177 624.4 462 65.6
Nitab4.5_0001057g0120 Nicotiana tabacum HOM05D006686 ORTHO05D008463 9.3e-177 624.0 430 68.6
Glyma.07G273000 Glycine max HOM05D006686 ORTHO05D008463 2.7e-176 622.5 391 75.4
Phvul.003G075600 Phaseolus vulgaris HOM05D006686 ORTHO05D008463 6.0e-176 621.3 389 75.1
Peaxi162Scf00011g01843 Petunia axillaris HOM05D006686 ORTHO05D008463 1.7e-175 619.8 430 69.5
PGSC0003DMG402024871 Solanum tuberosum HOM05D006686 ORTHO05D008463 1.7e-175 619.8 429 68.3
Solyc01g103110.3 Solanum lycopersicum HOM05D006686 ORTHO05D008463 3.0e-175 619.0 429 68.1
PSO210G5299 Papaver somniferum HOM05D006686 ORTHO05D008463 5.1e-175 618.2 451 65.6
RcHm_v2.0_Chr7g0220181 Rosa chinensis HOM05D006686 ORTHO05D008463 1.5e-174 616.7 368 78.0
VMungo1215G3175 Vigna mungo HOM05D006686 ORTHO05D008463 1.5e-174 616.7 389 74.0
Sopen01g045530 Solanum pennellii HOM05D006686 ORTHO05D008463 2.5e-174 615.9 429 68.1
arahy.Tifrunner.gnm1.ann1.A5H9W7 Arachis hypogaea HOM05D006686 ORTHO05D008463 7.3e-174 614.4 471 63.1
CAN.G855.45 Capsicum annuum HOM05D006686 ORTHO05D008463 1.3e-173 613.6 428 68.5
Sed0016336 Sechium edule HOM05D006686 ORTHO05D008463 1.3e-173 613.6 365 78.1
EL10Ac6g14006 Beta vulgaris HOM05D006686 ORTHO05D008463 2.8e-173 612.5 493 61.7
arahy.Tifrunner.gnm1.ann1.KKPS0T Arachis hypogaea HOM05D006686 ORTHO05D003399 3.6e-173 612.1 468 63.0
unitig_22.g6102 Utricularia gibba HOM05D006686 ORTHO05D008463 1.8e-172 609.8 445 66.3
Lalb_Chr07g0176791 Lupinus albus HOM05D006686 ORTHO05D008463 5.3e-172 608.2 439 67.2
HPP92_005637 Vanilla planifolia HOM05D006686 ORTHO05D008463 6.9e-172 607.8 455 63.7
Ca_13532_v3 Cicer arietinum L. HOM05D006686 ORTHO05D008463 3.8e-170 602.1 434 67.1
HPP92_005643 Vanilla planifolia HOM05D006686 ORTHO05D008463 1.4e-169 600.1 455 63.7
Psat4g001080 Pisum sativum HOM05D006686 ORTHO05D008463 1.8e-167 593.2 389 69.9
Zm00001eb423040 Zea mays HOM05D006686 ORTHO05D008463 1.8e-167 593.2 450 63.6
Lj9C281G9 Lonicera japonica HOM05D006686 ORTHO05D008463 1.1e-166 590.5 442 64.9
Medtr4g134670 Medicago truncatula HOM05D006686 ORTHO05D008463 1.3e-165 587.0 396 69.4
Cpa.g.sc113.25 Carica papaya HOM05D006686 ORTHO05D008463 6.2e-165 584.7 463 64.4
TPR.G5968 Trifolium pratense HOM05D006686 ORTHO05D008463 5.3e-164 581.6 385 71.2
Rhsim05G0116000 Rhododendron simsii HOM05D006686 ORTHO05D008463 8.4e-162 574.3 480 60.8
SEGI_40259 Sequoiadendron giganteum HOM05D006686 ORTHO05D008463 3.5e-160 568.9 369 72.1
Atru.chr6.339 Acer truncatum HOM05D006686 ORTHO05D008463 1.8e-159 566.6 397 68.8
Ciclev10001220m.g Citrus clementina HOM05D006686 ORTHO05D008463 9.6e-158 560.8 480 59.6
Mapoly0007s0219 Marchantia polymorpha HOM05D006686 ORTHO05D008463 2.6e-155 552.7 447 59.5
Pp3c21_14930 Physcomitrium patens HOM05D006686 ORTHO05D008463 2.5e-153 546.2 466 57.1
AagrBONN_evm.TU.Sc2ySwM_362.840 Anthoceros agrestis HOM05D006686 ORTHO05D008463 1.0e-151 540.8 471 57.3
CiPaw.06G176300 Carya illinoinensis HOM05D006686 ORTHO05D008463 5.1e-151 538.5 334 76.0
Aqoxy5G01865 Aquilegia oxysepala HOM05D006686 ORTHO05D008463 5.7e-142 508.4 433 57.5
SMO364G0094 Selaginella moellendorffii HOM05D006686 ORTHO05D008463 1.5e-139 500.4 384 62.2
Sc03g0004960 Simmondsia chinensis HOM05D006686 ORTHO05D008463 1.2e-128 464.2 447 53.2
PSO447G0166 Papaver somniferum HOM05D006686 ORTHO05D008463 1.0e-119 434.5 487 48.5
Haze_09995 Corylus avellana HOM05D006686 ORTHO05D008463 1.0e-103 381.3 212 84.4
Actinidia01629 Actinidia chinensis HOM05D006686 ORTHO05D008463 4.9e-101 372.5 323 58.2
Cre09.g399626 Chlamydomonas reinhardtii HOM05D006686 ORTHO05D008463 5.9e-99 365.5 454 43.2
Haze_27211 Corylus avellana HOM05D006686 ORTHO05D008463 3.1e-95 353.2 382 45.5
Glyma.17G001600 Glycine max HOM05D006686 ORTHO05D008463 1.4e-92 344.4 259 68.7
PRCOL_00000210 Prasinoderma coloniale HOM05D006686 ORTHO05D008463 1.0e-90 338.2 456 42.5
RcHm_v2.0_Chr7g0220471 Rosa chinensis HOM05D006686 ORTHO05D008463 1.5e-86 324.3 217 72.4
CARHR293020 Cardamine hirsuta HOM05D006686 ORTHO05D008463 4.1e-84 316.2 159 93.7
FAN08G3117 Fragaria x ananassa HOM05D006686 ORTHO05D008463 7.3e-81 305.4 269 57.6
Oeu000154.1 Olea europaea HOM05D006686 ORTHO05D008463 3.9e-74 283.1 321 49.2
AUR62032459 Chenopodium quinoa HOM05D006686 ORTHO05D008463 2.7e-59 233.8 235 49.8
Eucgr.A00755 Eucalyptus grandis HOM05D006686 ORTHO05D008463 8.7e-58 228.8 147 73.5
Haze_09994 Corylus avellana HOM05D006686 ORTHO05D008463 1.6e-43 181.4 255 43.1
Nitab4.5_0004668g0030 Nicotiana tabacum HOM05D006686 ORTHO05D008463 6.7e-42 176.0 128 65.6
CBR_g48698 Chara braunii HOM05D006686 ORTHO05D008463 1.9e-28 131.3 123 54.5
MELO3C032221.2 Cucumis melo HOM05D006686 ORTHO05D008463 2.3e-26 124.4 80 76.2
Hund15396 Selenicereus undatus HOM05D006686 ORTHO05D008463 9.7e-25 119.0 76 73.7
Actinidia26190 Actinidia chinensis HOM05D006686 ORTHO05D008463 8.2e-24 115.9 67 79.1
CiPaw.06G176500 Carya illinoinensis HOM05D006686 ORTHO05D008463 3.1e-23 114.0 130 47.7
Haze_05751 Corylus avellana HOM05D006686 ORTHO05D008463 5.1e-18 96.7 88 59.1
CBR_g48699 Chara braunii HOM05D006686 ORTHO05D008463 1.1e-15 89.0 148 32.4
Peaxi162Scf00011g01844 Petunia axillaris HOM05D006686 ORTHO05D008463 1.4e-15 88.6 130 41.5
RcHm_v2.0_Chr7g0220191 Rosa chinensis HOM05D006686 ORTHO05D008463 1.3e-08 65.5 117 35.0


User provided reference genes

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