Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G13092 Arabidopsis lyrata HOM05D000041 ORTHO05D015368 7.5e-43 176.8 90 100.0
BcaC07g40996 Brassica carinata HOM05D000041 ORTHO05D000061 7.8e-24 113.6 79 74.7
C08p39980 Brassica napus HOM05D000041 ORTHO05D000061 2.5e-22 108.6 79 72.2
BolC8t51571H Brassica oleracea HOM05D000041 ORTHO05D000061 2.5e-22 108.6 79 72.2
BcaB06g27894 Brassica carinata HOM05D000041 ORTHO05D000061 7.3e-22 107.1 81 70.4
BcaC02g08549 Brassica carinata HOM05D000041 ORTHO05D000061 2.8e-21 105.1 80 71.2
C04p52710 Brassica napus HOM05D000041 ORTHO05D015368 2.8e-21 105.1 80 71.2
BolC4t26836H Brassica oleracea HOM05D000041 ORTHO05D015368 2.8e-21 105.1 80 71.2
Thhalv10000508m.g Eutrema salsugineum HOM05D000041 ORTHO05D000061 8.1e-21 103.6 79 72.2
Thhalv10000544m.g Eutrema salsugineum HOM05D000041 ORTHO05D015368 8.1e-21 103.6 79 72.2
Thhalv10000622m.g Eutrema salsugineum HOM05D000041 ORTHO05D000061 8.1e-21 103.6 80 72.5
Thhalv10002365m.g Eutrema salsugineum HOM05D000041 ORTHO05D000061 8.1e-21 103.6 80 72.5
Thhalv10000481m.g Eutrema salsugineum HOM05D000041 ORTHO05D000061 1.1e-20 103.2 80 71.2
A03p27260 Brassica napus HOM05D000041 ORTHO05D015368 3.1e-20 101.7 79 69.6
BraA09t41093Z Brassica rapa HOM05D000041 ORTHO05D000061 3.1e-20 101.7 81 65.4
BcaC01g04874 Brassica carinata HOM05D000041 ORTHO05D000061 4.0e-20 101.3 79 69.6
C03p32770 Brassica napus HOM05D000041 ORTHO05D000061 2.0e-19 99.0 79 69.6
BolC3t15612H Brassica oleracea HOM05D000041 ORTHO05D000061 2.0e-19 99.0 79 69.6
C04p52740 Brassica napus HOM05D000041 ORTHO05D000061 4.4e-19 97.8 82 63.4
BolC4t26839H Brassica oleracea HOM05D000041 ORTHO05D000061 4.4e-19 97.8 82 63.4
AT2G23200 Arabidopsis thaliana HOM05D000041 ORTHO05D000061 1.3e-18 96.3 78 62.8
BcaB01g02979 Brassica carinata HOM05D000041 ORTHO05D000061 8.4e-18 93.6 79 65.8
A04p17840 Brassica napus HOM05D000041 ORTHO05D000061 8.4e-18 93.6 82 63.4
CARHR114260 Cardamine hirsuta HOM05D000041 ORTHO05D000061 2.4e-17 92.0 75 68.0
BraA04t17403Z Brassica rapa HOM05D000041 ORTHO05D000061 1.0e-15 86.7 85 61.2
Carub.0004s0241 Capsella rubella HOM05D000041 ORTHO05D000061 1.0e-15 86.7 78 59.0
CARHR114300 Cardamine hirsuta HOM05D000041 ORTHO05D000061 1.9e-14 82.4 77 59.7
AL4G13080 Arabidopsis lyrata HOM05D000041 ORTHO05D000061 4.3e-14 81.3 62 67.7
CARHR114290 Cardamine hirsuta HOM05D000041 ORTHO05D015368 5.3e-12 74.3 65 66.2
THA.LOC104819861 Tarenaya hassleriana HOM05D000041 ORTHO05D000061 5.1e-07 57.8 72 48.6


User provided reference genes

Program Settings