Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G11590 Arabidopsis lyrata HOM05D001518 ORTHO05D006498 7.0e-57 224.2 154 100.0
AL1G44650 Arabidopsis lyrata HOM05D001518 ORTHO05D006498 1.7e-55 219.5 154 92.9
AL5G37460 Arabidopsis lyrata HOM05D001518 ORTHO05D006498 3.4e-27 125.6 75 81.3
AT3G56140 Arabidopsis thaliana HOM05D001518 ORTHO05D006498 3.4e-27 125.6 75 81.3
A07p22800 Brassica napus HOM05D001518 ORTHO05D006498 4.4e-27 125.2 75 81.3
BraA07t29945Z Brassica rapa HOM05D001518 ORTHO05D006498 4.4e-27 125.2 75 81.3
Thhalv10005804m.g Eutrema salsugineum HOM05D001518 ORTHO05D006498 4.4e-27 125.2 75 81.3
BcaC08g44762 Brassica carinata HOM05D001518 ORTHO05D006498 9.9e-27 124.0 75 80.0
C06p23300 Brassica napus HOM05D001518 ORTHO05D006498 9.9e-27 124.0 75 80.0
BolC6t37503H Brassica oleracea HOM05D001518 ORTHO05D006498 9.9e-27 124.0 75 80.0
Carub.0005s2289 Capsella rubella HOM05D001518 ORTHO05D006498 2.2e-26 122.9 77 81.8
Sp5g06390 Schrenkiella parvula HOM05D001518 ORTHO05D006498 2.2e-26 122.9 75 78.7
Carub.0004s2264 Capsella rubella HOM05D001518 ORTHO05D006498 6.4e-26 121.3 101 62.4
BcaB02g07667 Brassica carinata HOM05D001518 ORTHO05D006498 1.1e-25 120.6 76 80.3
Sp4g22720 Schrenkiella parvula HOM05D001518 ORTHO05D006498 1.1e-25 120.6 72 77.8
C04p68170 Brassica napus HOM05D001518 ORTHO05D006498 1.9e-25 119.8 72 76.4
BolC4t28323H Brassica oleracea HOM05D001518 ORTHO05D006498 1.9e-25 119.8 72 76.4
AL4G38220 Arabidopsis lyrata HOM05D001518 ORTHO05D006498 2.4e-25 119.4 101 60.4
A04p30770 Brassica napus HOM05D001518 ORTHO05D006498 5.4e-25 118.2 72 75.0
BraA04t18535Z Brassica rapa HOM05D001518 ORTHO05D006498 5.4e-25 118.2 72 75.0
THA.LOC104810131 Tarenaya hassleriana HOM05D001518 ORTHO05D006498 5.4e-25 118.2 75 76.0
AT2G40400 Arabidopsis thaliana HOM05D001518 ORTHO05D006498 7.1e-25 117.9 101 59.4
Thhalv10016304m.g Eutrema salsugineum HOM05D001518 ORTHO05D006498 7.1e-25 117.9 73 72.6
Aa31LG10G11040 Aethionema arabicum HOM05D001518 ORTHO05D006498 9.3e-25 117.5 75 74.7
CARHR135480 Cardamine hirsuta HOM05D001518 ORTHO05D006498 1.0e-23 114.0 72 72.2
PGR044G0181 Punica granatum HOM05D001518 ORTHO05D006498 1.3e-23 113.6 75 72.0
Aa31LG5G19180 Aethionema arabicum HOM05D001518 ORTHO05D006498 3.0e-23 112.5 75 70.7
Actinidia29734 Actinidia chinensis HOM05D001518 ORTHO05D006498 3.9e-23 112.1 75 69.3
Ciclev10030811m.g Citrus clementina HOM05D001518 ORTHO05D006498 3.9e-23 112.1 75 70.7
QL08p064026 Quercus lobata HOM05D001518 ORTHO05D006498 5.1e-23 111.7 77 72.7
Cfa001256 Carpinus fangiana HOM05D001518 ORTHO05D006498 1.5e-22 110.2 75 72.0
Dinv21799 Davidia involucrata HOM05D001518 ORTHO05D006498 1.5e-22 110.2 75 69.3
Rhsim03G0148300 Rhododendron simsii HOM05D001518 ORTHO05D006498 1.5e-22 110.2 75 69.3
Aqoxy2G00769 Aquilegia oxysepala HOM05D001518 ORTHO05D006498 1.9e-22 109.8 103 55.3
TWI53G0536 Tripterygium wilfordii HOM05D001518 ORTHO05D006498 1.9e-22 109.8 73 71.2
CAN.G659.7 Capsicum annuum HOM05D001518 ORTHO05D006498 2.5e-22 109.4 73 72.6
Nitab4.5_0002854g0050 Nicotiana tabacum HOM05D001518 ORTHO05D006498 2.5e-22 109.4 73 72.6
PSO339G3904 Papaver somniferum HOM05D001518 ORTHO05D006498 3.3e-22 109.0 72 70.8
PGSC0003DMG400023943 Solanum tuberosum HOM05D001518 ORTHO05D006498 3.3e-22 109.0 73 71.2
Haze_17295 Corylus avellana HOM05D001518 ORTHO05D006498 4.3e-22 108.6 75 70.7
Solyc06g050620.3 Solanum lycopersicum HOM05D001518 ORTHO05D006498 4.3e-22 108.6 73 71.2
Sopen06g016190 Solanum pennellii HOM05D001518 ORTHO05D006498 4.3e-22 108.6 73 71.2
TPR.G29216 Trifolium pratense HOM05D001518 ORTHO05D006498 4.3e-22 108.6 75 66.7
Ah.16g104010 Amaranthus hybridus HOM05D001518 ORTHO05D006498 5.6e-22 108.2 75 68.0
Duzib168G1941 Durio zibethinus HOM05D001518 ORTHO05D006498 5.6e-22 108.2 73 69.9
FvH4_7g25380 Fragaria vesca HOM05D001518 ORTHO05D006498 7.3e-22 107.8 75 68.0
FAN06G3540 Fragaria x ananassa HOM05D001518 ORTHO05D006498 7.3e-22 107.8 75 68.0
Manes.10G007200 Manihot esculenta HOM05D001518 ORTHO05D006498 7.3e-22 107.8 75 69.3
PSO384G4720 Papaver somniferum HOM05D001518 ORTHO05D006498 7.3e-22 107.8 72 69.4
CiPaw.01G302600 Carya illinoinensis HOM05D001518 ORTHO05D006498 9.6e-22 107.5 75 69.3
Lj8A60T48 Lonicera japonica HOM05D001518 ORTHO05D006498 1.3e-21 107.1 75 66.7
Nn2g11022 Nelumbo nucifera HOM05D001518 ORTHO05D006498 1.3e-21 107.1 75 66.7
Nitab4.5_0001291g0130 Nicotiana tabacum HOM05D001518 ORTHO05D006498 1.3e-21 107.1 73 69.9
Sc11g0005470 Simmondsia chinensis HOM05D001518 ORTHO05D006498 1.3e-21 107.1 75 68.0
Sed0021910 Sechium edule HOM05D001518 ORTHO05D006498 1.6e-21 106.7 75 66.7
Thecc.09G230400 Theobroma cacao HOM05D001518 ORTHO05D006498 1.6e-21 106.7 73 67.1
Atru.chr12.119 Acer truncatum HOM05D001518 ORTHO05D006498 2.1e-21 106.3 69 73.9
CANSAT56G0726 Cannabis sativa HOM05D001518 ORTHO05D006498 2.1e-21 106.3 75 70.7
Ca_15169_v3 Cicer arietinum L. HOM05D001518 ORTHO05D006498 2.1e-21 106.3 75 66.7
FAN03G1866 Fragaria x ananassa HOM05D001518 ORTHO05D006498 2.1e-21 106.3 75 66.7
MD01G1160000 Malus domestica HOM05D001518 ORTHO05D006498 2.1e-21 106.3 75 68.0
Prupe.2G258000 Prunus persica HOM05D001518 ORTHO05D006498 2.1e-21 106.3 75 68.0
SGA_v2.0_scaffold145G36000 Striga asiatica HOM05D001518 ORTHO05D006498 2.1e-21 106.3 75 65.3
CsaV3_6G002050 Cucumis sativus L. HOM05D001518 ORTHO05D006498 3.6e-21 105.5 75 65.3
HanXRQChr07g0203501 Helianthus annuus HOM05D001518 ORTHO05D006498 3.6e-21 105.5 75 65.3
Medtr3g071970 Medicago truncatula HOM05D001518 ORTHO05D006498 3.6e-21 105.5 75 65.3
AUR62022961 Chenopodium quinoa HOM05D001518 ORTHO05D006498 4.8e-21 105.1 75 68.0
Gohir.A07G124600 Gossypium hirsutum HOM05D001518 ORTHO05D006498 4.8e-21 105.1 73 68.5
Lj6g0017401 Lotus japonicus HOM05D001518 ORTHO05D006498 4.8e-21 105.1 75 62.7
ATR0594G213 Amborella trichopoda HOM05D001518 ORTHO05D006498 6.2e-21 104.8 71 67.6
MELO3C008325.2 Cucumis melo HOM05D001518 ORTHO05D006498 6.2e-21 104.8 75 65.3
FAN01G2884 Fragaria x ananassa HOM05D001518 ORTHO05D006498 6.2e-21 104.8 75 66.7
AUR62012321 Chenopodium quinoa HOM05D001518 ORTHO05D006498 8.1e-21 104.4 75 68.0
COL.COLO4_24867 Corchorus olitorius HOM05D001518 ORTHO05D006498 8.1e-21 104.4 73 65.8
Eucgr.J00163 Eucalyptus grandis HOM05D001518 ORTHO05D006498 8.1e-21 104.4 73 65.8
Lj1C962G10 Lonicera japonica HOM05D001518 ORTHO05D006498 8.1e-21 104.4 77 67.5
Phvul.001G247100 Phaseolus vulgaris HOM05D001518 ORTHO05D006498 8.1e-21 104.4 75 64.0
Psat5g126120 Pisum sativum HOM05D001518 ORTHO05D006498 8.1e-21 104.4 75 64.0
TAR623G1694 Trochodendron aralioides HOM05D001518 ORTHO05D006498 8.1e-21 104.4 75 65.3
arahy.Tifrunner.gnm1.ann1.1N0RH8 Arachis hypogaea HOM05D001518 ORTHO05D006498 1.4e-20 103.6 75 62.7
ClCG11G005950 Citrullus lanatus HOM05D001518 ORTHO05D006498 1.4e-20 103.6 75 64.0
Glyma.18G023200 Glycine max HOM05D001518 ORTHO05D006498 1.8e-20 103.2 75 62.7
FAN10G1819 Fragaria x ananassa HOM05D001518 ORTHO05D006498 2.4e-20 102.8 76 67.1
RcHm_v2.0_Chr1g0371311 Rosa chinensis HOM05D001518 ORTHO05D006498 2.4e-20 102.8 75 62.7
Hund15866 Selenicereus undatus HOM05D001518 ORTHO05D006498 2.4e-20 102.8 75 65.3
Gorai.001G139200 Gossypium raimondii HOM05D001518 ORTHO05D006498 3.1e-20 102.4 73 67.1
VMungo1383G3076 Vigna mungo HOM05D001518 ORTHO05D006498 3.1e-20 102.4 75 62.7
arahy.Tifrunner.gnm1.ann1.73F65L Arachis hypogaea HOM05D001518 ORTHO05D006498 4.0e-20 102.1 75 61.3
Migut.F00620 Erythranthe guttata HOM05D001518 ORTHO05D006498 5.3e-20 101.7 75 65.3
Glyma.11G233800 Glycine max HOM05D001518 ORTHO05D006498 5.3e-20 101.7 72 62.5
CDE07G0354 Ceratophyllum demersum HOM05D001518 ORTHO05D006498 6.9e-20 101.3 70 68.6
Gohir.D07G128900 Gossypium hirsutum HOM05D001518 ORTHO05D006498 6.9e-20 101.3 73 67.1
Sed0027098 Sechium edule HOM05D001518 ORTHO05D006498 1.5e-19 100.1 75 61.3
Lsat_1_v5_gn_2_125780 Lactuca sativa HOM05D001518 ORTHO05D006498 2.0e-19 99.8 72 62.5
EL10Ac2g04913 Beta vulgaris HOM05D001518 ORTHO05D006498 2.6e-19 99.4 75 65.3
Hma1.2p1_1687F.1_g297510 Hydrangea macrophylla HOM05D001518 ORTHO05D006498 2.6e-19 99.4 75 64.0
GSVIVG01032735001 Vitis vinifera HOM05D001518 ORTHO05D006498 2.6e-19 99.4 69 66.7
Lalb_Chr08g0231381 Lupinus albus HOM05D001518 ORTHO05D006498 3.4e-19 99.0 75 60.0
SGA_v2.0_scaffold44G16654 Striga asiatica HOM05D001518 ORTHO05D006498 3.4e-19 99.0 71 66.2
unitig_62.g23927 Utricularia gibba HOM05D001518 ORTHO05D006498 3.4e-19 99.0 72 61.1
Lalb_Chr11g0075101 Lupinus albus HOM05D001518 ORTHO05D006498 4.4e-19 98.6 75 61.3
ECA238G1259 Erigeron canadensis HOM05D001518 ORTHO05D006498 5.8e-19 98.2 77 61.0
Migut.F01462 Erythranthe guttata HOM05D001518 ORTHO05D006498 7.6e-19 97.8 62 74.2
Sabra08G0055300 Salix brachista HOM05D001518 ORTHO05D006498 7.6e-19 97.8 72 62.5
SalBow3G0728 Salvia bowleyana HOM05D001518 ORTHO05D006498 7.6e-19 97.8 75 60.0
Cc02_g05880 Coffea canephora HOM05D001518 ORTHO05D006498 1.3e-18 97.1 69 63.8
SalBow5G2006 Salvia bowleyana HOM05D001518 ORTHO05D006498 1.3e-18 97.1 75 60.0
DCAR_011861 Daucus carota HOM05D001518 ORTHO05D006498 6.4e-18 94.7 75 60.0
Os01g0826900 Oryza sativa ssp. japonica HOM05D001518 ORTHO05D006498 1.4e-17 93.6 74 60.8
vmacro06911 Vaccinium macrocarpon HOM05D001518 ORTHO05D006498 4.2e-17 92.0 61 68.9
HPP92_019734 Vanilla planifolia HOM05D001518 ORTHO05D006498 7.9e-16 87.8 72 62.5
Cpa.g.sc19.113 Carica papaya HOM05D001518 ORTHO05D006498 1.3e-15 87.0 54 79.6
Zm00001eb149270 Zea mays HOM05D001518 ORTHO05D006498 1.3e-15 87.0 74 56.8
SMO164G0201 Selaginella moellendorffii HOM05D001518 ORTHO05D006498 3.3e-14 82.4 65 61.5
AagrBONN_evm.TU.Sc2ySwM_228.3192 Anthoceros agrestis HOM05D001518 ORTHO05D006498 4.3e-14 82.0 69 55.1
Mapoly0059s0064 Marchantia polymorpha HOM05D001518 ORTHO05D006498 1.3e-13 80.5 70 57.1
Zm00001eb351960 Zea mays HOM05D001518 ORTHO05D006498 1.6e-13 80.1 74 52.7
Pp3c8_1750 Physcomitrium patens HOM05D001518 ORTHO05D006498 1.4e-12 77.0 68 54.4
Pp3c3_35080 Physcomitrium patens HOM05D001518 ORTHO05D006498 3.1e-12 75.9 68 55.9
HPP92_019705 Vanilla planifolia HOM05D001518 ORTHO05D006498 2.7e-08 62.8 55 60.0
TAR636G0404 Trochodendron aralioides HOM05D001518 ORTHO05D006498 2.3e-07 59.7 40 67.5
C04p68190 Brassica napus HOM05D001518 ORTHO05D006498 3.3e-06 55.8 40 60.0
Peaxi162Scf00284g00235 Petunia axillaris HOM05D001518 ORTHO05D006498 5.6e-06 55.1 32 87.5


User provided reference genes

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