Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G10430 Arabidopsis lyrata HOM05D007135 ORTHO05D008880 2.7e-46 188.3 96 100.0
Sp4g00480 Schrenkiella parvula HOM05D007135 ORTHO05D008880 1.2e-41 172.9 99 90.9
AT2G21290 Arabidopsis thaliana HOM05D007135 ORTHO05D008880 3.4e-41 171.4 99 89.9
Thhalv10000391m.g Eutrema salsugineum HOM05D007135 ORTHO05D008880 3.4e-41 171.4 99 90.9
Carub.0004s0033 Capsella rubella HOM05D007135 ORTHO05D008880 4.4e-41 171.0 99 90.9
CARHR112160 Cardamine hirsuta HOM05D007135 ORTHO05D008880 1.1e-39 166.4 99 88.9
Aa31LG7G15200 Aethionema arabicum HOM05D007135 ORTHO05D008880 4.7e-35 151.0 99 80.8
C08p41660 Brassica napus HOM05D007135 ORTHO05D008880 2.0e-33 145.6 95 81.1
A09p58330 Brassica napus HOM05D007135 ORTHO05D008880 2.6e-33 145.2 95 78.9
BcaC02g08801 Brassica carinata HOM05D007135 ORTHO05D008880 4.4e-33 144.4 98 78.6
BolC4t26651H Brassica oleracea HOM05D007135 ORTHO05D008880 4.4e-33 144.4 98 78.6
BraA09t41224Z Brassica rapa HOM05D007135 ORTHO05D008880 7.5e-33 143.7 95 78.9
C04p50530 Brassica napus HOM05D007135 ORTHO05D008880 1.7e-32 142.5 98 77.6
BolC8t51729H Brassica oleracea HOM05D007135 ORTHO05D008880 4.9e-32 141.0 95 78.9
A04p16070 Brassica napus HOM05D007135 ORTHO05D008880 6.4e-32 140.6 99 78.8
BraA04t17247Z Brassica rapa HOM05D007135 ORTHO05D008880 6.4e-32 140.6 99 78.8
BcaB08g34980 Brassica carinata HOM05D007135 ORTHO05D008880 1.9e-31 139.0 93 79.6
BcaC07g41158 Brassica carinata HOM05D007135 ORTHO05D008880 4.3e-28 127.9 93 73.1
COL.COLO4_26047 Corchorus olitorius HOM05D007135 ORTHO05D008880 1.6e-27 125.9 96 70.8
Duzib132G0527 Durio zibethinus HOM05D007135 ORTHO05D008880 2.1e-27 125.6 96 71.9
Cfa005113 Carpinus fangiana HOM05D007135 ORTHO05D008880 4.7e-27 124.4 97 72.2
QL11p046458 Quercus lobata HOM05D007135 ORTHO05D008880 1.4e-26 122.9 98 67.3
TWI75G0424 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 5.2e-26 120.9 96 65.6
Cpa.g.sc150.16 Carica papaya HOM05D007135 ORTHO05D008880 8.9e-26 120.2 96 68.8
Atru.chr5.3145 Acer truncatum HOM05D007135 ORTHO05D008880 1.2e-25 119.8 96 65.6
RcHm_v2.0_Chr6g0267951 Rosa chinensis HOM05D007135 ORTHO05D008880 1.2e-25 119.8 96 65.6
Haze_02238 Corylus avellana HOM05D007135 ORTHO05D008880 2.0e-25 119.0 96 64.6
Duzib248G1605 Durio zibethinus HOM05D007135 ORTHO05D008880 2.0e-25 119.0 96 67.7
Gorai.005G250000 Gossypium raimondii HOM05D007135 ORTHO05D008880 2.0e-25 119.0 96 65.6
Thecc.02G074900 Theobroma cacao HOM05D007135 ORTHO05D008880 2.6e-25 118.6 96 67.7
CANSAT11G0395 Cannabis sativa HOM05D007135 ORTHO05D008880 3.4e-25 118.2 101 66.3
Gohir.D02G222000 Gossypium hirsutum HOM05D007135 ORTHO05D008880 4.4e-25 117.9 96 64.6
Potri.004G163100 Populus trichocarpa HOM05D007135 ORTHO05D008880 4.4e-25 117.9 94 68.1
PGR142G3962 Punica granatum HOM05D007135 ORTHO05D008880 4.4e-25 117.9 96 65.6
Prupe.8G083700 Prunus persica HOM05D007135 ORTHO05D008880 5.8e-25 117.5 100 64.0
MD10G1062900 Malus domestica HOM05D007135 ORTHO05D008880 7.5e-25 117.1 100 66.0
Ciclev10029699m.g Citrus clementina HOM05D007135 ORTHO05D008880 9.8e-25 116.7 96 66.7
Nn5g29239 Nelumbo nucifera HOM05D007135 ORTHO05D008880 9.8e-25 116.7 94 68.1
Gorai.002G149200 Gossypium raimondii HOM05D007135 ORTHO05D008880 1.3e-24 116.3 96 64.6
Aqoxy2G03368 Aquilegia oxysepala HOM05D007135 ORTHO05D008880 2.2e-24 115.5 98 66.3
FAN27G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 2.2e-24 115.5 96 63.5
CSS0018566 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 2.9e-24 115.2 93 68.8
MELO3C013419.2 Cucumis melo HOM05D007135 ORTHO05D008880 3.7e-24 114.8 96 63.5
FAN15G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 4.9e-24 114.4 96 63.5
DCAR_003685 Daucus carota HOM05D007135 ORTHO05D008880 8.3e-24 113.6 97 62.9
Gohir.A13G090900 Gossypium hirsutum HOM05D007135 ORTHO05D008880 8.3e-24 113.6 96 63.5
FvH4_2g10470 Fragaria vesca HOM05D007135 ORTHO05D008880 1.1e-23 113.2 93 66.7
FAN24G2677 Fragaria x ananassa HOM05D007135 ORTHO05D008880 1.1e-23 113.2 93 66.7
Potri.009G124700 Populus trichocarpa HOM05D007135 ORTHO05D008880 1.1e-23 113.2 93 66.7
Manes.11G081700 Manihot esculenta HOM05D007135 ORTHO05D008880 1.4e-23 112.8 93 64.5
Gohir.A03G200700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 1.9e-23 112.5 96 63.5
AUR62010386 Chenopodium quinoa HOM05D007135 ORTHO05D008880 3.2e-23 111.7 97 62.9
AUR62016832 Chenopodium quinoa HOM05D007135 ORTHO05D008880 3.2e-23 111.7 97 62.9
THA.LOC104824791 Tarenaya hassleriana HOM05D007135 ORTHO05D008880 5.4e-23 110.9 87 69.0
Sed0017056 Sechium edule HOM05D007135 ORTHO05D008880 7.1e-23 110.5 96 63.5
Solyc01g110400.2 Solanum lycopersicum HOM05D007135 ORTHO05D008880 9.2e-23 110.2 96 61.5
Sopen01g052550 Solanum pennellii HOM05D007135 ORTHO05D008880 9.2e-23 110.2 96 61.5
PSO541G1924 Papaver somniferum HOM05D007135 ORTHO05D008880 1.2e-22 109.8 96 58.3
PSO675G0190 Papaver somniferum HOM05D007135 ORTHO05D008880 1.2e-22 109.8 96 59.4
ClCG02G004560 Citrullus lanatus HOM05D007135 ORTHO05D008880 1.6e-22 109.4 96 62.5
Manes.04G083200 Manihot esculenta HOM05D007135 ORTHO05D008880 2.7e-22 108.6 93 63.4
EL10Ac9g21635 Beta vulgaris HOM05D007135 ORTHO05D008880 4.6e-22 107.8 96 60.4
Migut.B00173 Erythranthe guttata HOM05D007135 ORTHO05D008880 1.0e-21 106.7 95 63.2
SalBow6G3736 Salvia bowleyana HOM05D007135 ORTHO05D008880 1.0e-21 106.7 96 63.5
CSS0017994 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 2.3e-21 105.5 93 63.4
ATR0149G014 Amborella trichopoda HOM05D007135 ORTHO05D008880 3.9e-21 104.8 94 58.5
Dinv26818 Davidia involucrata HOM05D000193 ORTHO05D000402 3.9e-21 104.8 83 69.9
CAN.G170.101 Capsicum annuum HOM05D007135 ORTHO05D008880 5.1e-21 104.4 96 63.5
Cc02_g16900 Coffea canephora HOM05D007135 ORTHO05D008880 8.6e-21 103.6 99 58.6
Lalb_Chr23g0265121 Lupinus albus HOM05D007135 ORTHO05D008880 1.9e-20 102.4 53 92.5
Lalb_Chr23g0265141 Lupinus albus HOM05D007135 ORTHO05D008880 1.9e-20 102.4 53 92.5
Phvul.009G002700 Phaseolus vulgaris HOM05D007135 ORTHO05D008880 1.9e-20 102.4 96 58.3
Gohir.D13G096700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 2.5e-20 102.1 87 64.4
MBI05_g16268_MAGBIO Magnolia biondii HOM05D007135 ORTHO05D008880 2.5e-20 102.1 98 58.2
Sc08g0000910 Simmondsia chinensis HOM05D007135 ORTHO05D008880 2.5e-20 102.1 97 55.7
Lj1g0005652 Lotus japonicus HOM05D007135 ORTHO05D008880 4.3e-20 101.3 96 60.4
TWI79G1445 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 5.6e-20 100.9 84 64.3
unitig_60.g25867 Utricularia gibba HOM05D007135 ORTHO05D008880 5.6e-20 100.9 81 65.4
SHI05613 Sapria himalayana HOM05D007135 ORTHO05D008880 9.5e-20 100.1 53 86.8
MD05G1055600 Malus domestica HOM05D007135 ORTHO05D008880 1.2e-19 99.8 96 58.3
TPR.G32169 Trifolium pratense HOM05D007135 ORTHO05D008880 2.1e-19 99.0 95 57.9
Medtr3g117570 Medicago truncatula HOM05D007135 ORTHO05D008880 2.8e-19 98.6 88 59.1
Ah.01g018800 Amaranthus hybridus HOM05D007135 ORTHO05D008880 3.6e-19 98.2 96 55.2
Psat5g003840 Pisum sativum HOM05D007135 ORTHO05D008880 4.7e-19 97.8 95 57.9
Ca_15331_v3 Cicer arietinum L. HOM05D007135 ORTHO05D008880 6.2e-19 97.4 77 66.2
CiPaw.05G073400 Carya illinoinensis HOM05D007135 ORTHO05D008880 1.1e-18 96.7 84 65.5
vmacro17421 Vaccinium macrocarpon HOM05D007135 ORTHO05D008880 1.8e-18 95.9 83 61.4
ECA234G2991 Erigeron canadensis HOM05D007135 ORTHO05D008880 2.3e-18 95.5 62 79.0
Rhsim05G0068200 Rhododendron simsii HOM05D007135 ORTHO05D008880 2.3e-18 95.5 84 65.5
Os09g0528100 Oryza sativa ssp. japonica HOM05D007135 ORTHO05D008880 3.1e-18 95.1 83 62.7
Actinidia02247 Actinidia chinensis HOM05D007135 ORTHO05D008880 4.0e-18 94.7 101 54.5
TAR381G0296 Trochodendron aralioides HOM05D007135 ORTHO05D008880 8.9e-18 93.6 83 62.7
Nitab4.5_0005266g0060 Nicotiana tabacum HOM05D007135 ORTHO05D008880 2.6e-17 92.0 88 61.4
Nitab4.5_0005932g0010 Nicotiana tabacum HOM05D007135 ORTHO05D008880 9.9e-17 90.1 84 61.9
Duzib052G0169 Durio zibethinus HOM05D007135 ORTHO05D008880 6.4e-16 87.4 80 62.5
GSVIVG01024170001 Vitis vinifera HOM05D007135 ORTHO05D008880 1.9e-15 85.9 81 63.0
Sabra04G0109400 Salix brachista HOM05D007135 ORTHO05D008880 1.2e-14 83.2 79 59.5
Sabra09G0095700 Salix brachista HOM05D007135 ORTHO05D008880 1.3e-13 79.7 78 57.7
CsaV3_7G000400 Cucumis sativus L. HOM05D007135 ORTHO05D008880 3.9e-13 78.2 81 54.3
Glyma.04G007900 Glycine max HOM05D007135 ORTHO05D008880 5.1e-13 77.8 85 52.9
Glyma.06G007700 Glycine max HOM05D007135 ORTHO05D008880 1.9e-12 75.9 48 79.2
Haze_08383 Corylus avellana HOM05D007135 ORTHO05D008880 5.6e-12 74.3 50 80.0
FAN20G0703 Fragaria x ananassa HOM05D007135 ORTHO05D008880 5.6e-12 74.3 41 87.8
Lsat_1_v5_gn_4_67341 Lactuca sativa HOM05D007135 ORTHO05D008880 1.2e-11 73.2 84 52.4
Haze_15927 Corylus avellana HOM05D018783 ORTHO05D008880 8.1e-11 70.5 64 60.9
Peaxi162Scf00016g00015 Petunia axillaris HOM05D007135 ORTHO05D008880 8.1e-11 70.5 57 71.9
HanXRQChr10g0294181 Helianthus annuus HOM05D007135 ORTHO05D008880 1.4e-10 69.7 81 55.6
HPP92_008881 Vanilla planifolia HOM05D007135 ORTHO05D008880 1.4e-10 69.7 39 82.1
Zm00001eb103340 Zea mays HOM05D007135 ORTHO05D008880 4.0e-10 68.2 56 60.7
Aa31LG7G15350 Aethionema arabicum HOM05D007135 ORTHO05D008880 2.9e-08 62.0 67 58.2
Mapoly0090s0033 Marchantia polymorpha HOM05D007135 ORTHO05D008880 1.2e-06 56.6 61 49.2
RhsimUnG0003900 Rhododendron simsii HOM05D004431 ORTHO05D005053 4.6e-06 54.7 36 83.3
RhsimUnG0067300 Rhododendron simsii HOM05D004431 ORTHO05D005053 4.6e-06 54.7 36 83.3


User provided reference genes

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