Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL4G10300 Arabidopsis lyrata HOM05D007718 ORTHO05D009752 1.6e-48 195.7 94 100.0
AT2G21195 Arabidopsis thaliana HOM05D007718 ORTHO05D009752 5.1e-42 174.1 117 76.1
CARHR112060 Cardamine hirsuta HOM05D007718 ORTHO05D009752 9.0e-39 163.3 96 85.4
Carub.0004s0023 Capsella rubella HOM05D007718 ORTHO05D009752 2.0e-38 162.2 85 88.2
A04p15950 Brassica napus HOM05D007718 ORTHO05D009752 4.9e-37 157.5 93 82.8
C04p50420 Brassica napus HOM05D007718 ORTHO05D009752 1.3e-34 149.4 93 82.8
BolC4t26639H Brassica oleracea HOM05D007718 ORTHO05D009752 5.1e-34 147.5 93 81.7
Thhalv10000395m.g Eutrema salsugineum HOM05D007718 ORTHO05D009752 1.5e-33 146.0 82 86.6
BraA04t17231Z Brassica rapa HOM05D007718 ORTHO05D009752 8.1e-32 140.2 104 69.2
THA.LOC104807782 Tarenaya hassleriana HOM05D007718 ORTHO05D009752 2.3e-26 122.1 68 80.9
Aa31LG7G15310 Aethionema arabicum HOM05D007718 ORTHO05D009752 4.5e-22 107.8 63 82.5
Aa31sc115G10 Aethionema arabicum HOM05D007718 ORTHO05D009752 6.5e-21 104.0 63 81.0
Dinv22108 Davidia involucrata HOM05D007718 ORTHO05D009752 1.1e-20 103.2 67 71.6
Thecc.08G178100 Theobroma cacao HOM05D007718 ORTHO05D009752 2.5e-20 102.1 68 70.6
Manes.02G205384 Manihot esculenta HOM05D007718 ORTHO05D009752 7.1e-20 100.5 69 66.7
Manes.02G221600 Manihot esculenta HOM05D007718 ORTHO05D009752 7.1e-20 100.5 69 66.7
QL08p027549 Quercus lobata HOM05D007718 ORTHO05D009752 7.1e-20 100.5 62 74.2
Manes.02G201400 Manihot esculenta HOM05D007718 ORTHO05D009752 9.3e-20 100.1 69 66.7
Prupe.8G007200 Prunus persica HOM05D007718 ORTHO05D009752 9.3e-20 100.1 66 72.7
Actinidia04142 Actinidia chinensis HOM05D007718 ORTHO05D009752 1.2e-19 99.8 57 75.4
Nn5g27289 Nelumbo nucifera HOM05D007718 ORTHO05D009752 2.7e-19 98.6 58 75.9
Potri.019G071800 Populus trichocarpa HOM05D007718 ORTHO05D009752 2.7e-19 98.6 62 71.0
Ciclev10022933m.g Citrus clementina HOM05D007718 ORTHO05D009752 3.5e-19 98.2 59 74.6
Manes.02G201100 Manihot esculenta HOM05D007718 ORTHO05D009752 3.5e-19 98.2 69 65.2
Phvul.008G126000 Phaseolus vulgaris HOM05D007718 ORTHO05D009752 6.0e-19 97.4 57 75.4
COL.COLO4_05200 Corchorus olitorius HOM05D007718 ORTHO05D009752 7.9e-19 97.1 63 69.8
GSVIVG01036292001 Vitis vinifera HOM05D007718 ORTHO05D009752 1.0e-18 96.7 71 66.2
CANSAT21G0081 Cannabis sativa HOM05D007718 ORTHO05D009752 1.3e-18 96.3 68 66.2
CANSAT21G2143 Cannabis sativa HOM05D007718 ORTHO05D009752 1.3e-18 96.3 68 66.2
PSO170G0967 Papaver somniferum HOM05D007718 ORTHO05D009752 1.3e-18 96.3 62 74.2
TPR.G23283 Trifolium pratense HOM05D007718 ORTHO05D009752 1.3e-18 96.3 57 73.7
TAR383G0451 Trochodendron aralioides HOM05D007718 ORTHO05D009752 1.3e-18 96.3 66 69.7
Atru.chr13.2493 Acer truncatum HOM05D007718 ORTHO05D009752 1.8e-18 95.9 57 71.9
Atru.chr13.2505 Acer truncatum HOM05D007718 ORTHO05D009752 1.8e-18 95.9 57 71.9
CiPaw.04G009400 Carya illinoinensis HOM05D007718 ORTHO05D009752 1.8e-18 95.9 84 57.1
Ca_07513_v3 Cicer arietinum L. HOM05D007718 ORTHO05D009752 1.8e-18 95.9 57 73.7
Gohir.A08G230000 Gossypium hirsutum HOM05D007718 ORTHO05D009752 1.8e-18 95.9 62 72.6
Lalb_Chr03g0041731 Lupinus albus HOM05D007718 ORTHO05D009752 1.8e-18 95.9 56 75.0
Medtr7g057760 Medicago truncatula HOM05D007718 ORTHO05D009752 1.8e-18 95.9 58 72.4
CDE04G1586 Ceratophyllum demersum HOM05D007718 ORTHO05D009752 2.3e-18 95.5 64 65.6
PSO017G4737 Papaver somniferum HOM05D007718 ORTHO05D009752 2.3e-18 95.5 68 67.6
TWI18G0705 Tripterygium wilfordii HOM05D007718 ORTHO05D009752 2.3e-18 95.5 65 67.7
EL10Ac1g01266 Beta vulgaris HOM05D007718 ORTHO05D009752 3.0e-18 95.1 69 63.8
Duzib177G0547 Durio zibethinus HOM05D007718 ORTHO05D009752 3.9e-18 94.7 63 69.8
Rhsim01G0004700 Rhododendron simsii HOM05D007718 ORTHO05D009752 3.9e-18 94.7 59 67.8
Glyma.08G353800 Glycine max HOM05D007718 ORTHO05D009752 5.1e-18 94.4 85 55.3
arahy.Tifrunner.gnm1.ann1.KNF5LM Arachis hypogaea HOM05D007718 ORTHO05D009752 6.7e-18 94.0 52 80.8
Gohir.D08G250400 Gossypium hirsutum HOM05D007718 ORTHO05D009752 6.7e-18 94.0 62 71.0
Gorai.004G267100 Gossypium raimondii HOM05D007718 ORTHO05D009752 6.7e-18 94.0 62 71.0
Aqoxy5G00833 Aquilegia oxysepala HOM05D007718 ORTHO05D009752 8.7e-18 93.6 63 68.3
ClCG08G001110 Citrullus lanatus HOM05D007718 ORTHO05D009752 8.7e-18 93.6 52 75.0
MELO3C022171.2 Cucumis melo HOM05D007718 ORTHO05D009752 8.7e-18 93.6 52 75.0
Nn5g31449 Nelumbo nucifera HOM05D007718 ORTHO05D009752 8.7e-18 93.6 54 74.1
CSS0008152 Camellia sinensis var. sinensis HOM05D007718 ORTHO05D009752 1.1e-17 93.2 56 69.6
MD05G1004000 Malus domestica HOM05D007718 ORTHO05D009752 1.1e-17 93.2 57 71.9
Sed0001698 Sechium edule HOM05D007718 ORTHO05D009752 1.1e-17 93.2 61 68.9
arahy.Tifrunner.gnm1.ann1.NNV5AG Arachis hypogaea HOM05D007718 ORTHO05D009752 1.5e-17 92.8 52 80.8
FAN27G3322 Fragaria x ananassa HOM05D007718 ORTHO05D009752 1.5e-17 92.8 68 60.3
RcHm_v2.0_Chr6g0251251 Rosa chinensis HOM05D007718 ORTHO05D009752 1.5e-17 92.8 68 64.7
SGA_v2.0_scaffold24G10646 Striga asiatica HOM05D007718 ORTHO05D009752 3.3e-17 91.7 49 79.6
Migut.C01378 Erythranthe guttata HOM05D007718 ORTHO05D009752 4.3e-17 91.3 68 58.8
FvH4_2g00852 Fragaria vesca HOM05D007718 ORTHO05D009752 4.3e-17 91.3 59 62.7
vmacro13123 Vaccinium macrocarpon HOM05D007718 ORTHO05D009752 5.7e-17 90.9 56 71.4
Ah.05g170340 Amaranthus hybridus HOM05D007718 ORTHO05D009752 1.6e-16 89.4 57 70.2
BcaC02g08810 Brassica carinata HOM05D007718 ORTHO05D009752 2.8e-16 88.6 42 92.9
unitig_26.g9859 Utricularia gibba HOM05D007718 ORTHO05D009752 2.8e-16 88.6 60 61.7
Peaxi162Scf00048g00419 Petunia axillaris HOM05D007718 ORTHO05D009752 3.7e-16 88.2 55 69.1
HPP92_012514 Vanilla planifolia HOM05D007718 ORTHO05D009752 4.1e-15 84.7 68 57.4
FAN20G0290 Fragaria x ananassa HOM05D005243 ORTHO05D009752 6.9e-15 84.0 51 70.6
MSTRG.1597 Avicennia marina HOM05D007718 ORTHO05D009752 9.0e-15 83.6 50 66.0
SEGI_14522 Sequoiadendron giganteum HOM05D007718 ORTHO05D009752 2.6e-14 82.0 72 48.6
HanXRQChr09g0267041 Helianthus annuus HOM05D007718 ORTHO05D009752 4.5e-14 81.3 65 53.8
ATR1089G029 Amborella trichopoda HOM05D007718 ORTHO05D009752 5.9e-14 80.9 56 57.1
Os07g0265100 Oryza sativa ssp. japonica HOM05D007718 ORTHO05D009752 1.0e-13 80.1 61 52.5
ECA232G2296 Erigeron canadensis HOM05D005243 ORTHO05D006670 1.3e-13 79.7 54 63.0
Lsat_1_v5_gn_3_36061 Lactuca sativa HOM05D007718 ORTHO05D009752 1.7e-13 79.3 57 61.4
Zm00001eb304750 Zea mays HOM05D007718 ORTHO05D009752 3.8e-13 78.2 64 50.0
AagrBONN_evm.TU.Sc2ySwM_344.3280 Anthoceros agrestis HOM05D007718 ORTHO05D009752 2.3e-10 68.9 63 44.4
AUR62038531 Chenopodium quinoa HOM05D007718 ORTHO05D009752 2.3e-10 68.9 50 62.0
Oeu020544.1 Olea europaea HOM05D007718 ORTHO05D009752 1.1e-09 66.6 31 87.1
SalBow7G2847 Salvia bowleyana HOM05D007718 ORTHO05D009752 1.5e-09 66.2 38 71.1
Psat3g145480 Pisum sativum HOM05D007718 ORTHO05D009752 5.7e-09 64.3 40 67.5
VMungo1383G3332 Vigna mungo HOM05D000479 ORTHO05D001285 7.4e-09 63.9 53 56.6
Lj1g0018023 Lotus japonicus HOM05D007718 ORTHO05D009752 1.3e-08 63.2 37 73.0
Mapoly0002s0003 Marchantia polymorpha HOM05D007718 ORTHO05D009752 1.7e-08 62.8 69 44.9
Cc10_g08650 Coffea canephora HOM05D007718 ORTHO05D009752 3.1e-07 58.5 47 55.3


User provided reference genes

Program Settings