Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL484U10020 Arabidopsis lyrata HOM05D005428 ORTHO05D006876 1.4e-34 149.1 74 100.0
AL8G16680 Arabidopsis lyrata HOM05D005428 ORTHO05D006876 1.4e-34 149.1 74 100.0
AT5G43600 Arabidopsis thaliana HOM05D005428 ORTHO05D006876 4.0e-34 147.5 74 98.6
BcaC06g31687 Brassica carinata HOM05D005428 ORTHO05D006876 8.9e-34 146.4 74 97.3
BcaC06g34641 Brassica carinata HOM05D005428 ORTHO05D006876 2.0e-33 145.2 74 95.9
C07p26210 Brassica napus HOM05D005428 ORTHO05D006876 2.0e-33 145.2 74 95.9
BolC7t43148H Brassica oleracea HOM05D005428 ORTHO05D006876 2.0e-33 145.2 74 95.9
Sp2g08410 Schrenkiella parvula HOM05D005428 ORTHO05D006876 2.0e-33 145.2 74 95.9
Thhalv10003195m.g Eutrema salsugineum HOM05D005428 ORTHO05D006876 2.6e-33 144.8 74 95.9
A06p47790 Brassica napus HOM05D005428 ORTHO05D006876 3.4e-33 144.4 74 94.6
BraA06t27649Z Brassica rapa HOM05D005428 ORTHO05D006876 3.4e-33 144.4 74 94.6
CARHR006240 Cardamine hirsuta HOM05D005428 ORTHO05D006876 5.8e-33 143.7 74 95.9
Carub.0008s0503 Capsella rubella HOM05D005428 ORTHO05D006876 1.7e-32 142.1 74 94.6
Aa31LG5G3610 Aethionema arabicum HOM05D005428 ORTHO05D006876 6.4e-32 140.2 74 93.2
BcaB07g30566 Brassica carinata HOM05D005428 ORTHO05D006876 2.4e-31 138.3 75 93.3
THA.LOC104801094 Tarenaya hassleriana HOM05D005428 ORTHO05D006876 5.4e-31 137.1 74 89.2
ClCG05G004570 Citrullus lanatus HOM05D005428 ORTHO05D006876 1.5e-28 129.0 74 81.1
MELO3C006466.2 Cucumis melo HOM05D005428 ORTHO05D006876 1.5e-28 129.0 74 82.4
Os12g0597500 Oryza sativa ssp. japonica HOM05D005428 ORTHO05D006876 1.5e-28 129.0 74 83.8
RcHm_v2.0_Chr4g0390681 Rosa chinensis HOM05D005428 ORTHO05D006876 4.3e-28 127.5 74 82.4
Sed0003134 Sechium edule HOM05D005428 ORTHO05D006876 5.6e-28 127.1 74 81.1
CANSAT78G2122 Cannabis sativa HOM05D005428 ORTHO05D006876 7.3e-28 126.7 74 82.4
Cpa.g.sc58.52 Carica papaya HOM05D005428 ORTHO05D006876 7.3e-28 126.7 71 83.1
Manes.03G168500 Manihot esculenta HOM05D005428 ORTHO05D006876 9.6e-28 126.3 74 81.1
Nn1g02619 Nelumbo nucifera HOM05D005428 ORTHO05D006876 9.6e-28 126.3 74 81.1
RcHm_v2.0_Chr4g0390621 Rosa chinensis HOM05D005428 ORTHO05D006876 9.6e-28 126.3 74 81.1
GSVIVG01018124001 Vitis vinifera HOM05D005428 ORTHO05D006876 9.6e-28 126.3 72 84.7
EL10Ac3g05890 Beta vulgaris HOM05D005428 ORTHO05D006876 1.3e-27 125.9 74 78.4
Zm00001eb030970 Zea mays HOM05D005428 ORTHO05D006876 1.3e-27 125.9 74 81.1
AUR62002250 Chenopodium quinoa HOM05D005428 ORTHO05D006876 1.6e-27 125.6 74 78.4
COL.COLO4_15798 Corchorus olitorius HOM05D005428 ORTHO05D006876 1.6e-27 125.6 71 84.5
Haze_11309 Corylus avellana HOM05D005428 ORTHO05D006876 1.6e-27 125.6 72 81.9
QL06p015833 Quercus lobata HOM05D005428 ORTHO05D006876 1.6e-27 125.6 73 80.8
Rhsim04G0189900 Rhododendron simsii HOM05D005428 ORTHO05D006876 1.6e-27 125.6 72 83.3
CsaV3_3G012550 Cucumis sativus L. HOM05D005428 ORTHO05D006876 2.1e-27 125.2 74 79.7
vmacro08417 Vaccinium macrocarpon HOM05D005428 ORTHO05D006876 2.1e-27 125.2 72 83.3
CSS0003291 Camellia sinensis var. sinensis HOM05D005428 ORTHO05D006876 2.8e-27 124.8 72 83.3
CSS0012294 Camellia sinensis var. sinensis HOM05D005428 ORTHO05D006876 2.8e-27 124.8 72 83.3
CiPaw.01G190000 Carya illinoinensis HOM05D005428 ORTHO05D006876 2.8e-27 124.8 69 85.5
AUR62015461 Chenopodium quinoa HOM05D005428 ORTHO05D006876 2.8e-27 124.8 72 79.2
Haze_11306 Corylus avellana HOM05D005428 ORTHO05D006876 2.8e-27 124.8 72 81.9
Potri.010G076100 Populus trichocarpa HOM05D005428 ORTHO05D006876 2.8e-27 124.8 74 78.4
FvH4_4g02810 Fragaria vesca HOM05D005428 ORTHO05D006876 3.6e-27 124.4 74 79.7
FAN12G3785 Fragaria x ananassa HOM05D005428 ORTHO05D006876 3.6e-27 124.4 74 79.7
Hma1.2p1_1276F.1_g272180 Hydrangea macrophylla HOM05D005428 ORTHO05D006876 3.6e-27 124.4 72 83.3
Hma1.2p1_1276F.1_g272190 Hydrangea macrophylla HOM05D005428 ORTHO05D006876 3.6e-27 124.4 72 83.3
MBI11_g34854_MAGBIO Magnolia biondii HOM05D005428 ORTHO05D006876 3.6e-27 124.4 74 79.7
Peaxi162Scf00813g00223 Petunia axillaris HOM05D005428 ORTHO05D006876 3.6e-27 124.4 71 84.5
Solyc09g083410.4 Solanum lycopersicum HOM05D005428 ORTHO05D006876 3.6e-27 124.4 71 84.5
Sopen09g032350 Solanum pennellii HOM05D005428 ORTHO05D006876 3.6e-27 124.4 71 84.5
PGSC0003DMG400015115 Solanum tuberosum HOM05D005428 ORTHO05D006876 3.6e-27 124.4 71 84.5
Gohir.A09G057600 Gossypium hirsutum HOM05D005428 ORTHO05D006876 4.8e-27 124.0 72 80.6
Dinv29906 Davidia involucrata HOM05D005428 ORTHO05D006876 6.2e-27 123.6 72 81.9
Nitab4.5_0000525g0250 Nicotiana tabacum HOM05D005428 ORTHO05D006876 6.2e-27 123.6 71 84.5
Prupe.1G031400 Prunus persica HOM05D005428 ORTHO05D006876 6.2e-27 123.6 74 78.4
Atru.BG.84.p Acer truncatum HOM05D005428 ORTHO05D006876 8.1e-27 123.2 72 86.1
CAN.G1007.11 Capsicum annuum HOM05D005428 ORTHO05D006876 8.1e-27 123.2 71 83.1
Gohir.D09G056800 Gossypium hirsutum HOM05D005428 ORTHO05D006876 8.1e-27 123.2 72 79.2
Gorai.006G070400 Gossypium raimondii HOM05D005428 ORTHO05D006876 8.1e-27 123.2 72 79.2
PSO210G3950 Papaver somniferum HOM05D005428 ORTHO05D006876 1.1e-26 122.9 72 80.6
Ah.13g066060 Amaranthus hybridus HOM05D005428 ORTHO05D006876 1.4e-26 122.5 74 75.7
Thecc.04G246600 Theobroma cacao HOM05D005428 ORTHO05D006876 1.4e-26 122.5 72 81.9
Duzib151G0442 Durio zibethinus HOM05D005428 ORTHO05D006876 1.8e-26 122.1 72 81.9
arahy.Tifrunner.gnm1.ann1.562L79 Arachis hypogaea HOM05D005428 ORTHO05D006876 2.4e-26 121.7 74 78.4
arahy.Tifrunner.gnm1.ann1.WBEP1R Arachis hypogaea HOM05D005428 ORTHO05D006876 2.4e-26 121.7 74 78.4
Ciclev10004873m.g Citrus clementina HOM05D005428 ORTHO05D006876 2.4e-26 121.7 71 81.7
Ciclev10004875m.g Citrus clementina HOM05D005428 ORTHO05D006876 2.4e-26 121.7 71 81.7
Lj6A657G48 Lonicera japonica HOM05D005428 ORTHO05D006876 2.4e-26 121.7 72 81.9
SGA_v2.0_scaffold79G25631 Striga asiatica HOM05D005428 ORTHO05D006876 2.4e-26 121.7 71 81.7
DCAR_027281 Daucus carota HOM05D005428 ORTHO05D006876 4.0e-26 120.9 72 81.9
Duzib212G0361 Durio zibethinus HOM05D005428 ORTHO05D006876 4.0e-26 120.9 71 81.7
Migut.N00242 Erythranthe guttata HOM05D005428 ORTHO05D006876 4.0e-26 120.9 71 81.7
Eucgr.H03154 Eucalyptus grandis HOM05D005428 ORTHO05D006876 4.0e-26 120.9 72 79.2
Ca_09838_v3 Cicer arietinum L. HOM05D005428 ORTHO05D006876 5.3e-26 120.6 74 78.4
HanXRQChr12g0386131 Helianthus annuus HOM05D005428 ORTHO05D006876 5.3e-26 120.6 73 79.5
ATR0665G589 Amborella trichopoda HOM05D005428 ORTHO05D006876 1.2e-25 119.4 74 77.0
MD13G1207900 Malus domestica HOM05D005428 ORTHO05D006876 1.2e-25 119.4 74 75.7
Sabra10G0032700 Salix brachista HOM05D005428 ORTHO05D006876 1.2e-25 119.4 73 75.3
Hund11855 Selenicereus undatus HOM05D005428 ORTHO05D006876 1.2e-25 119.4 74 75.7
Lalb_Chr21g0312281 Lupinus albus HOM05D005428 ORTHO05D006876 1.5e-25 119.0 73 82.2
Medtr1g075320 Medicago truncatula HOM05D005428 ORTHO05D006876 1.5e-25 119.0 74 77.0
TPR.G27197 Trifolium pratense HOM05D005428 ORTHO05D006876 1.5e-25 119.0 74 77.0
Actinidia40084 Actinidia chinensis HOM05D005428 ORTHO05D006876 2.0e-25 118.6 70 81.4
Lj5g0022725 Lotus japonicus HOM05D005428 ORTHO05D006876 2.0e-25 118.6 74 77.0
PGR004G1836 Punica granatum HOM05D005428 ORTHO05D006876 2.0e-25 118.6 72 76.4
SalBow3G1895 Salvia bowleyana HOM05D005428 ORTHO05D006876 2.0e-25 118.6 71 77.5
TWI09G0474 Tripterygium wilfordii HOM05D005428 ORTHO05D006876 2.6e-25 118.2 71 80.3
ECA233G3252 Erigeron canadensis HOM05D005428 ORTHO05D006876 4.4e-25 117.5 71 80.3
Glyma.10G184900 Glycine max HOM05D005428 ORTHO05D006876 4.4e-25 117.5 68 80.9
Phvul.007G125750 Phaseolus vulgaris HOM05D005428 ORTHO05D006876 4.4e-25 117.5 68 80.9
VMungo0720G3093 Vigna mungo HOM05D005428 ORTHO05D006876 4.4e-25 117.5 68 80.9
Atru.chr4.2219 Acer truncatum HOM05D005428 ORTHO05D006876 5.8e-25 117.1 72 80.6
Aqoxy2G03568 Aquilegia oxysepala HOM05D005428 ORTHO05D006876 7.6e-25 116.7 71 76.1
MSTRG.24699 Avicennia marina HOM05D005428 ORTHO05D006876 9.9e-25 116.3 71 77.5
Glyma.20G205500 Glycine max HOM05D005428 ORTHO05D006876 9.9e-25 116.3 68 79.4
Cfa008375 Carpinus fangiana HOM05D005428 ORTHO05D006876 3.8e-24 114.4 74 77.0
Lalb_Chr06g0169281 Lupinus albus HOM05D005428 ORTHO05D006876 3.8e-24 114.4 71 77.5
Psat6g125360 Pisum sativum HOM05D005428 ORTHO05D006876 1.9e-23 112.1 65 81.5
SMO358G0475 Selaginella moellendorffii HOM05D005428 ORTHO05D006876 2.4e-23 111.7 71 71.8
Pp3c9_12590 Physcomitrium patens HOM05D005428 ORTHO05D006876 3.2e-23 111.3 69 75.4
Cc03_g04910 Coffea canephora HOM05D005428 ORTHO05D006876 5.4e-23 110.5 71 73.2
unitig_46.g18501 Utricularia gibba HOM05D005428 ORTHO05D006876 1.2e-22 109.4 71 71.8
unitig_47.g30762 Utricularia gibba HOM05D005428 ORTHO05D006876 1.2e-22 109.4 71 71.8
MCO01G069 Micromonas commoda HOM05D005428 ORTHO05D006876 3.9e-21 104.4 69 65.2
Mapoly0068s0045 Marchantia polymorpha HOM05D005428 ORTHO05D006876 1.5e-20 102.4 68 70.6
Lsat_1_v5_gn_5_72961 Lactuca sativa HOM05D005428 ORTHO05D006876 3.3e-20 101.3 61 78.7
HPP92_018494 Vanilla planifolia HOM05D005428 ORTHO05D006876 3.3e-20 101.3 61 75.4
HPP92_018496 Vanilla planifolia HOM05D005428 ORTHO05D006876 3.3e-20 101.3 61 75.4
Cre06.g276700 Chlamydomonas reinhardtii HOM05D005428 ORTHO05D006876 4.8e-19 97.4 71 66.2
CBR_g40439 Chara braunii HOM05D005428 ORTHO05D006876 1.8e-18 95.5 70 64.3
CBR_g4812 Chara braunii HOM05D005428 ORTHO05D006876 2.9e-16 88.2 71 60.6
CDE07G1054 Ceratophyllum demersum HOM05D005428 ORTHO05D006876 4.6e-14 80.9 45 82.2
Cfa008373 Carpinus fangiana HOM05D005428 ORTHO05D006876 5.1e-13 77.4 42 83.3
Nitab4.5_0001418g0050 Nicotiana tabacum HOM05D005428 ORTHO05D006876 1.1e-12 76.3 69 60.9
TAR365G0225 Trochodendron aralioides HOM05D005428 ORTHO05D006876 3.3e-12 74.7 41 82.9
AagrBONN_evm.TU.Sc2ySwM_228.2275 Anthoceros agrestis HOM05D005428 ORTHO05D006876 4.0e-10 67.8 36 80.6
Pp3s42_40 Physcomitrium patens HOM05D004829 ORTHO05D034576 4.2e-07 57.8 57 45.6
Cfa025646 Carpinus fangiana HOM05D005428 ORTHO05D006876 6.0e-06 53.9 57 42.1
Pp3s46_240 Physcomitrium patens HOM05D003658 ORTHO05D004457 7.9e-06 53.5 69 39.1


User provided reference genes

Program Settings