Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL449U10010 Arabidopsis lyrata HOM05D010340 ORTHO05D012605 1.1e-49 199.5 90 100.0
AL4G11610 Arabidopsis lyrata HOM05D010340 ORTHO05D012605 1.1e-49 199.5 90 100.0
AL4G11500 Arabidopsis lyrata HOM05D010340 ORTHO05D012605 2.9e-47 191.4 90 94.4
AT2G22145 Arabidopsis thaliana HOM05D010340 ORTHO05D012605 4.7e-45 184.1 90 91.1
AT2G22155 Arabidopsis thaliana HOM05D010340 ORTHO05D012605 5.2e-36 154.1 90 76.7
Carub.0004s0132 Capsella rubella HOM05D010340 ORTHO05D012605 3.5e-24 114.8 89 55.1
THA.LOC104824563 Tarenaya hassleriana HOM05D002657 ORTHO05D003059 3.9e-23 111.3 84 59.5
THA.LOC109117075 Tarenaya hassleriana HOM05D002657 ORTHO05D012605 3.9e-23 111.3 84 59.5
A04p18190 Brassica napus HOM05D010340 ORTHO05D012605 2.9e-18 95.1 92 51.1
C04p53370 Brassica napus HOM05D010340 ORTHO05D012605 2.9e-18 95.1 92 51.1
BolC4t26891H Brassica oleracea HOM05D010340 ORTHO05D012605 2.9e-18 95.1 92 51.1
A04p18200 Brassica napus HOM05D010340 ORTHO05D012605 4.9e-18 94.4 92 50.0
A07p07500 Brassica napus HOM05D010340 ORTHO05D012605 1.4e-17 92.8 91 49.5
C04p53210 Brassica napus HOM05D010340 ORTHO05D012605 1.4e-17 92.8 92 48.9
C04p53300 Brassica napus HOM05D010340 ORTHO05D012605 1.4e-17 92.8 92 48.9
BolC4t26885H Brassica oleracea HOM05D010340 ORTHO05D012605 1.4e-17 92.8 92 48.9
BraA07t28541Z Brassica rapa HOM05D010340 ORTHO05D012605 1.4e-17 92.8 91 49.5
A04p18180 Brassica napus HOM05D010340 ORTHO05D012605 5.4e-17 90.9 92 47.8
C07p08320 Brassica napus HOM05D010340 ORTHO05D012605 7.1e-17 90.5 85 49.4
A07p05210 Brassica napus HOM05D010340 ORTHO05D012605 8.7e-15 83.6 100 46.0
THA.LOC104798617 Tarenaya hassleriana HOM05D009469 ORTHO05D011620 1.4e-09 66.2 71 42.3
Carub.0008s1729 Capsella rubella HOM05D009469 ORTHO05D011620 3.2e-09 65.1 66 40.9
Carub.0008s2240 Capsella rubella HOM05D009469 ORTHO05D011620 9.3e-09 63.5 88 37.5
Duzib150G0010 Durio zibethinus HOM05D010340 ORTHO05D012605 6.0e-08 60.8 72 37.5
AT5G15000 Arabidopsis thaliana HOM05D009469 ORTHO05D011620 1.3e-07 59.7 65 36.9
Sp6g29040 Schrenkiella parvula HOM05D009469 ORTHO05D011620 2.3e-07 58.9 74 33.8
BraA01t04575Z Brassica rapa HOM05D009469 ORTHO05D011620 3.0e-07 58.5 72 34.7
Aa31LG5G23090 Aethionema arabicum HOM05D001603 ORTHO05D001393 6.6e-07 57.4 67 38.8
CARHR198310 Cardamine hirsuta HOM05D009469 ORTHO05D011620 6.6e-07 57.4 53 39.6
AL8G38430 Arabidopsis lyrata HOM05D009469 ORTHO05D011620 8.7e-07 57.0 61 37.7
AL8G38470 Arabidopsis lyrata HOM05D009469 ORTHO05D011620 8.7e-07 57.0 61 37.7
BcaC09g47751 Brassica carinata HOM05D009469 ORTHO05D011620 8.7e-07 57.0 68 36.8
A06p26430 Brassica napus HOM05D009469 ORTHO05D011620 8.7e-07 57.0 68 36.8
BNapus_Darmor_BZH_scaffold_162p00200 Brassica napus HOM05D009469 ORTHO05D011620 8.7e-07 57.0 68 36.8
BNapus_Darmor_BZH_scaffold_78p00180 Brassica napus HOM05D009469 ORTHO05D011620 8.7e-07 57.0 68 36.8
BolC1t05826H Brassica oleracea HOM05D009469 ORTHO05D011620 8.7e-07 57.0 68 36.8
CARHR243480 Cardamine hirsuta HOM05D001603 ORTHO05D001393 8.7e-07 57.0 67 37.3
Duzib187G1932 Durio zibethinus HOM05D001603 ORTHO05D001393 1.1e-06 56.6 67 31.3
CARHR042990 Cardamine hirsuta HOM05D001603 ORTHO05D001393 3.3e-06 55.1 67 35.8
AL6G25820 Arabidopsis lyrata HOM05D009469 ORTHO05D011620 4.3e-06 54.7 65 33.8
AT5G14995 Arabidopsis thaliana HOM05D009469 ORTHO05D011620 7.3e-06 53.9 72 33.3
BraA01t02924Z Brassica rapa HOM05D009469 ORTHO05D011620 7.3e-06 53.9 82 29.3


User provided reference genes

Program Settings