Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL41U10070 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 3.1e-82 308.5 168 100.0
AL4G23740 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 1.3e-80 303.1 168 98.8
AT2G29180 Arabidopsis thaliana HOM05D007264 ORTHO05D008639 4.5e-73 278.1 170 91.8
Carub.0004s1020 Capsella rubella HOM05D007264 ORTHO05D008639 3.0e-69 265.4 169 86.4
CARHR122460 Cardamine hirsuta HOM05D007264 ORTHO05D008639 2.7e-62 242.3 175 80.0
Sp4g11990 Schrenkiella parvula HOM05D007264 ORTHO05D008639 3.9e-61 238.4 175 80.0
Thhalv10017315m.g Eutrema salsugineum HOM05D007264 ORTHO05D008639 4.1e-50 201.8 175 72.0
BcaB01g03134 Brassica carinata HOM05D007264 ORTHO05D008639 5.1e-45 184.9 177 68.4
BcaB01g03133 Brassica carinata HOM05D007264 ORTHO05D008639 3.3e-44 182.2 124 87.9
BcaC03g18293 Brassica carinata HOM05D007264 ORTHO05D008639 1.3e-43 180.3 172 69.2
C02p63690 Brassica napus HOM05D007264 ORTHO05D008639 1.3e-43 180.3 172 69.2
Aa31LG5G7130 Aethionema arabicum HOM05D007264 ORTHO05D008639 2.8e-43 179.1 172 65.1
BolC2t12437H Brassica oleracea HOM05D007264 ORTHO05D008639 1.1e-42 177.2 172 68.6
A02p43580 Brassica napus HOM05D007264 ORTHO05D008639 5.9e-41 171.4 175 66.9
BraA02t09285Z Brassica rapa HOM05D007264 ORTHO05D008639 7.7e-41 171.0 176 67.0
THA.LOC104800684 Tarenaya hassleriana HOM05D007264 ORTHO05D008639 8.8e-37 157.5 178 57.3
COL.COLO4_18565 Corchorus olitorius HOM05D007264 ORTHO05D008639 2.4e-26 122.9 118 60.2
Thecc.09G317100 Theobroma cacao HOM05D007264 ORTHO05D008639 3.1e-26 122.5 156 51.9
Gohir.D07G104200 Gossypium hirsutum HOM05D007264 ORTHO05D008639 4.1e-26 122.1 136 54.4
Gorai.001G112100 Gossypium raimondii HOM05D007264 ORTHO05D008639 4.1e-26 122.1 140 55.0
TWI79G0692 Tripterygium wilfordii HOM05D007264 ORTHO05D008639 4.1e-26 122.1 173 48.6
Cfa011538 Carpinus fangiana HOM05D007264 ORTHO05D008639 1.3e-24 117.1 167 50.9
Haze_24148 Corylus avellana HOM05D007264 ORTHO05D008639 2.2e-24 116.3 169 48.5
QL01p030632 Quercus lobata HOM05D007264 ORTHO05D008639 2.2e-24 116.3 176 46.6
PGR119G0519 Punica granatum HOM05D007264 ORTHO05D008639 5.0e-24 115.2 158 50.0
Eucgr.J02035 Eucalyptus grandis HOM05D007264 ORTHO05D008639 6.5e-24 114.8 167 46.1
FAN21G2492 Fragaria x ananassa HOM05D007264 ORTHO05D008639 1.1e-23 114.0 173 43.4
Prupe.6G071500 Prunus persica HOM05D007264 ORTHO05D008639 1.1e-23 114.0 165 45.5
FAN25G3374 Fragaria x ananassa HOM05D007264 ORTHO05D008639 1.9e-23 113.2 173 43.4
Gohir.A07G099900 Gossypium hirsutum HOM05D007264 ORTHO05D008639 2.5e-23 112.8 116 57.8
RcHm_v2.0_Chr5g0066101 Rosa chinensis HOM05D007264 ORTHO05D008639 3.2e-23 112.5 173 42.8
Dinv17036 Davidia involucrata HOM05D007264 ORTHO05D008639 4.2e-23 112.1 181 47.5
Dinv42982 Davidia involucrata HOM05D007264 ORTHO05D008639 4.2e-23 112.1 181 47.5
Dinv43117 Davidia involucrata HOM05D007264 ORTHO05D008639 4.2e-23 112.1 181 47.5
AUR62020022 Chenopodium quinoa HOM05D007264 ORTHO05D008639 1.2e-22 110.5 105 60.0
Nn8g40679 Nelumbo nucifera HOM05D007264 ORTHO05D008639 1.2e-22 110.5 125 53.6
FvH4_3g36880 Fragaria vesca HOM05D007264 ORTHO05D008639 1.6e-22 110.2 171 42.1
FAN11G3606 Fragaria x ananassa HOM05D007264 ORTHO05D008639 1.6e-22 110.2 171 42.1
Sabra16G0147800 Salix brachista HOM05D007264 ORTHO05D008639 6.1e-22 108.2 154 46.1
TAR623G1366 Trochodendron aralioides HOM05D007264 ORTHO05D008639 1.0e-21 107.5 172 44.2
TAR560G0010 Trochodendron aralioides HOM05D007264 ORTHO05D008639 5.2e-21 105.1 178 43.8
PSO339G5862 Papaver somniferum HOM05D007264 ORTHO05D008639 6.8e-21 104.8 112 52.7
MD03G1086900 Malus domestica HOM05D007264 ORTHO05D008639 8.8e-21 104.4 175 43.4
Ciclev10029397m.g Citrus clementina HOM05D007264 ORTHO05D008639 1.2e-20 104.0 174 43.1
Lsat_1_v5_gn_5_169441 Lactuca sativa HOM05D007264 ORTHO05D008639 1.2e-20 104.0 113 58.4
Sopen05g005050 Solanum pennellii HOM05D007264 ORTHO05D008639 1.5e-20 103.6 174 45.4
Nn2g13417 Nelumbo nucifera HOM05D007264 ORTHO05D008639 3.4e-20 102.4 107 58.9
arahy.Tifrunner.gnm1.ann1.4DS88F Arachis hypogaea HOM05D007264 ORTHO05D008639 4.4e-20 102.1 103 56.3
MD11G1096000 Malus domestica HOM05D007264 ORTHO05D008639 4.4e-20 102.1 175 41.7
vmacro03038 Vaccinium macrocarpon HOM05D007264 ORTHO05D008639 4.4e-20 102.1 167 40.7
CSS0034107 Camellia sinensis var. sinensis HOM05D007264 ORTHO05D008639 7.5e-20 101.3 165 47.9
Migut.D00885 Erythranthe guttata HOM05D007264 ORTHO05D008639 7.5e-20 101.3 107 59.8
Nitab4.5_0006942g0010 Nicotiana tabacum HOM05D007264 ORTHO05D008639 7.5e-20 101.3 149 46.3
Peaxi162Scf00038g02028 Petunia axillaris HOM05D007264 ORTHO05D008639 7.5e-20 101.3 160 45.0
Sed0006840 Sechium edule HOM05D007264 ORTHO05D008639 7.5e-20 101.3 109 55.0
Potri.001G243500 Populus trichocarpa HOM05D007264 ORTHO05D008639 9.8e-20 100.9 137 45.3
MSTRG.11098 Avicennia marina HOM05D007264 ORTHO05D008639 1.3e-19 100.5 175 45.7
Solyc05g009300.1 Solanum lycopersicum HOM05D007264 ORTHO05D008639 1.3e-19 100.5 174 44.3
Cc01_g13240 Coffea canephora HOM05D007264 ORTHO05D008639 1.7e-19 100.1 163 44.8
PGSC0003DMG400014567 Solanum tuberosum HOM05D007264 ORTHO05D008639 2.2e-19 99.8 174 45.4
arahy.Tifrunner.gnm1.ann1.EHGE9H Arachis hypogaea HOM05D007264 ORTHO05D008639 1.1e-18 97.4 103 54.4
EL10Ac7g16055 Beta vulgaris HOM05D007264 ORTHO05D008639 1.1e-18 97.4 163 39.9
ATR0559G356 Amborella trichopoda HOM05D007264 ORTHO05D008639 1.4e-18 97.1 120 52.5
Hund18892 Selenicereus undatus HOM05D007264 ORTHO05D008639 1.8e-18 96.7 157 43.9
Cpa.g.sc81.107 Carica papaya HOM05D007264 ORTHO05D008639 4.1e-18 95.5 176 40.9
Nitab4.5_0014843g0020 Nicotiana tabacum HOM05D007264 ORTHO05D008639 4.1e-18 95.5 110 51.8
Duzib168G0085 Durio zibethinus HOM05D007264 ORTHO05D008639 5.4e-18 95.1 161 46.0
Manes.01G170100 Manihot esculenta HOM05D007264 ORTHO05D008639 5.4e-18 95.1 142 46.5
MBI14_g08028_MAGBIO Magnolia biondii HOM05D007264 ORTHO05D008639 7.0e-18 94.7 119 52.9
PSO513G0105 Papaver somniferum HOM05D007264 ORTHO05D008639 1.2e-17 94.0 112 49.1
MELO3C025896.2 Cucumis melo HOM05D007264 ORTHO05D008639 2.0e-17 93.2 176 43.8
ECA248G2900 Erigeron canadensis HOM05D007264 ORTHO05D008639 2.7e-17 92.8 154 44.2
Atru.chr3.3962 Acer truncatum HOM05D007264 ORTHO05D008639 4.5e-17 92.0 119 51.3
Medtr2g097680 Medicago truncatula HOM05D007264 ORTHO05D008639 4.5e-17 92.0 163 42.3
CiPaw.14G066400 Carya illinoinensis HOM05D007264 ORTHO05D008639 1.0e-16 90.9 171 43.9
Lalb_Chr24g0394031 Lupinus albus HOM05D007264 ORTHO05D008639 1.7e-16 90.1 159 37.7
Medtr1g071380 Medicago truncatula HOM05D007264 ORTHO05D008639 2.3e-16 89.7 163 41.1
CsaV3_6G016660 Cucumis sativus L. HOM05D007264 ORTHO05D008639 1.1e-15 87.4 128 48.4
GSVIVG01024917001 Vitis vinifera HOM05D007264 ORTHO05D008639 1.1e-15 87.4 117 47.0
Actinidia33776 Actinidia chinensis HOM05D007264 ORTHO05D008639 1.9e-15 86.7 133 46.6
AUR62001749 Chenopodium quinoa HOM05D007264 ORTHO05D008639 5.6e-15 85.1 156 39.7
Aqoxy1G00887 Aquilegia oxysepala HOM05D007264 ORTHO05D008639 9.5e-15 84.3 163 38.0
HanXRQChr01g0010441 Helianthus annuus HOM05D007264 ORTHO05D008639 2.8e-14 82.8 165 41.8
CDE04G3075 Ceratophyllum demersum HOM05D007264 ORTHO05D008639 6.1e-14 81.6 111 43.2
ClCG02G019960 Citrullus lanatus HOM05D007264 ORTHO05D008639 8.0e-14 81.3 169 40.8
Oeu002437.1 Olea europaea HOM05D007264 ORTHO05D008639 1.0e-13 80.9 115 46.1
Oeu002436.1 Olea europaea HOM05D007264 ORTHO05D008639 3.0e-13 79.3 115 46.1
SGA_v2.0_scaffold111G31536 Striga asiatica HOM05D007264 ORTHO05D008639 5.2e-13 78.6 169 40.2
CANSAT54G1805 Cannabis sativa HOM05D007264 ORTHO05D008639 6.8e-13 78.2 168 37.5
Sc25g0001650 Simmondsia chinensis HOM05D007264 ORTHO05D008639 2.0e-12 76.6 114 41.2
Glyma.13G338500 Glycine max HOM05D007264 ORTHO05D008639 7.5e-12 74.7 79 54.4
Lj3g0004900 Lotus japonicus HOM05D007264 ORTHO05D008639 9.8e-12 74.3 173 35.3
Glyma.15G035800 Glycine max HOM05D007264 ORTHO05D008639 8.3e-11 71.2 78 51.3
unitig_899.g15261 Utricularia gibba HOM05D007264 ORTHO05D008639 3.2e-10 69.3 72 55.6
Ah.15g098550 Amaranthus hybridus HOM05D007264 ORTHO05D008639 9.2e-10 67.8 129 41.1
DCAR_005951 Daucus carota HOM05D007264 ORTHO05D008639 9.2e-10 67.8 171 37.4
Phvul.L007743 Phaseolus vulgaris HOM05D007264 ORTHO05D008639 4.6e-09 65.5 106 38.7
TAR369G0859 Trochodendron aralioides HOM05D007264 ORTHO05D008639 4.6e-09 65.5 111 45.0
VMungo1080G0594 Vigna mungo HOM05D007264 ORTHO05D008639 1.0e-08 64.3 108 37.0
TPR.G6833 Trifolium pratense HOM05D007264 ORTHO05D008639 3.0e-08 62.8 132 36.4
Psat5g287960 Pisum sativum HOM05D007264 ORTHO05D008639 5.0e-08 62.0 77 53.2


User provided reference genes

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