Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G54120 Arabidopsis lyrata HOM05D006722 ORTHO05D007944 1.3e-73 279.6 141 100.0
AT2G20870 Arabidopsis thaliana HOM05D006722 ORTHO05D007944 1.7e-70 269.2 141 95.7
Carub.0003s3553 Capsella rubella HOM05D006722 ORTHO05D007944 8.9e-67 256.9 141 90.1
Thhalv10002109m.g Eutrema salsugineum HOM05D006722 ORTHO05D007944 8.4e-65 250.4 143 89.5
Sp3g34120 Schrenkiella parvula HOM05D006722 ORTHO05D007944 1.5e-61 239.6 147 84.4
BcaB08g34945 Brassica carinata HOM05D006722 ORTHO05D007944 2.5e-61 238.8 148 83.8
A09p58680 Brassica napus HOM05D006722 ORTHO05D007944 1.6e-60 236.1 148 83.8
BcaC07g41191 Brassica carinata HOM05D006722 ORTHO05D007944 3.6e-60 235.0 148 82.4
C08p41970 Brassica napus HOM05D006722 ORTHO05D007944 3.6e-60 235.0 148 82.4
BolC8t51760H Brassica oleracea HOM05D006722 ORTHO05D007944 3.6e-60 235.0 148 82.4
BraA09t41254Z Brassica rapa HOM05D006722 ORTHO05D007944 3.6e-60 235.0 148 83.1
CARHR111610 Cardamine hirsuta HOM05D006722 ORTHO05D007944 8.1e-60 233.8 143 83.2
Aa31LG8G17780 Aethionema arabicum HOM05D006722 ORTHO05D007944 2.1e-55 219.2 141 80.9
THA.LOC104824711 Tarenaya hassleriana HOM05D006722 ORTHO05D007944 1.1e-40 170.2 144 64.6
Sp7g26110 Schrenkiella parvula HOM05D006722 ORTHO05D007944 2.4e-19 99.4 142 43.7
BraA01t01892Z Brassica rapa HOM05D006722 ORTHO05D007944 9.1e-19 97.4 143 44.1
A01p19570 Brassica napus HOM05D006722 ORTHO05D007944 2.6e-18 95.9 143 45.5
A03p57860 Brassica napus HOM05D006722 ORTHO05D007944 2.6e-18 95.9 141 42.6
BraA03t14850Z Brassica rapa HOM05D006722 ORTHO05D007944 2.6e-18 95.9 141 42.6
Thhalv10027152m.g Eutrema salsugineum HOM05D006722 ORTHO05D007944 3.4e-18 95.5 142 40.8
BolC7t46077H Brassica oleracea HOM05D006722 ORTHO05D007944 5.9e-18 94.7 141 41.1
C07p56000 Brassica napus HOM05D006722 ORTHO05D007944 1.7e-17 93.2 141 41.1
AL7G24440 Arabidopsis lyrata HOM05D006722 ORTHO05D007944 5.0e-17 91.7 143 42.7
BcaNung01592 Brassica carinata HOM05D006722 ORTHO05D007944 3.2e-16 89.0 142 41.5
CARHR235870 Cardamine hirsuta HOM05D006722 ORTHO05D007944 1.2e-15 87.0 86 52.3
BcaC06g32641 Brassica carinata HOM05D006722 ORTHO05D007944 1.0e-14 84.0 97 47.4
AT4G28160 Arabidopsis thaliana HOM05D006722 ORTHO05D007944 2.3e-14 82.8 106 43.4
Carub.0007s1261 Capsella rubella HOM05D006722 ORTHO05D007944 3.0e-14 82.4 108 41.7
Duzib132G0356 Durio zibethinus HOM05D006722 ORTHO05D007944 3.0e-14 82.4 134 44.0
Thecc.02G175500 Theobroma cacao HOM05D006722 ORTHO05D007944 6.7e-14 81.3 134 43.3
BcaC09g50509 Brassica carinata HOM05D006722 ORTHO05D007944 1.7e-12 76.6 114 41.2
Migut.H01053 Erythranthe guttata HOM05D006722 ORTHO05D007944 1.7e-12 76.6 77 51.9
COL.COLO4_35406 Corchorus olitorius HOM05D006722 ORTHO05D007944 3.7e-12 75.5 134 39.6
Migut.H01052 Erythranthe guttata HOM05D006722 ORTHO05D007944 6.3e-12 74.7 133 39.8
Hma1.2p1_0875F.1_g231440 Hydrangea macrophylla HOM05D006722 ORTHO05D007944 6.3e-12 74.7 108 45.4
TWI36G1477 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 6.3e-12 74.7 112 42.0
Oeu029925.1 Olea europaea HOM05D006722 ORTHO05D007944 1.4e-11 73.6 125 40.8
TWI75G0677 Tripterygium wilfordii HOM05D006722 ORTHO05D007944 1.4e-11 73.6 130 43.8
MSTRG.14198 Avicennia marina HOM05D006722 ORTHO05D007944 2.4e-11 72.8 130 40.0
Migut.H01051 Erythranthe guttata HOM05D006722 ORTHO05D007944 2.4e-11 72.8 71 53.5
Rhsim06G0148700 Rhododendron simsii HOM05D006722 ORTHO05D007944 3.1e-11 72.4 131 38.9
CANSAT64G0061 Cannabis sativa HOM05D006722 ORTHO05D007944 4.1e-11 72.0 127 41.7
Lalb_Chr14g0366741 Lupinus albus HOM05D006722 ORTHO05D007944 4.1e-11 72.0 135 42.2
BolC1t02409H Brassica oleracea HOM05D006722 ORTHO05D007944 7.0e-11 71.2 114 39.5
Duzib052G0119 Durio zibethinus HOM05D006722 ORTHO05D007944 1.2e-10 70.5 134 39.6
Duzib052G0455 Durio zibethinus HOM05D006722 ORTHO05D007944 1.2e-10 70.5 134 39.6
HanXRQChr17g0559971 Helianthus annuus HOM05D006722 ORTHO05D007944 1.2e-10 70.5 88 50.0
Atru.chr6.3036 Acer truncatum HOM05D006722 ORTHO05D007944 1.6e-10 70.1 122 36.9
Cpa.g.sc34.125 Carica papaya HOM05D006722 ORTHO05D007944 1.6e-10 70.1 209 30.6
DCAR_006245 Daucus carota HOM05D006722 ORTHO05D007944 2.6e-10 69.3 126 43.7
DCAR_023670 Daucus carota HOM05D006722 ORTHO05D007944 2.6e-10 69.3 140 37.9
Oeu029927.1 Olea europaea HOM05D006722 ORTHO05D007944 3.5e-10 68.9 125 38.4
ECA246G2923 Erigeron canadensis HOM05D006722 ORTHO05D007944 1.0e-09 67.4 97 46.4
Lsat_1_v5_gn_4_70120 Lactuca sativa HOM05D006722 ORTHO05D007944 1.0e-09 67.4 103 43.7
Lj8C115G8 Lonicera japonica HOM05D000389 ORTHO05D000287 1.7e-09 66.6 136 37.5
FAN14G5843 Fragaria x ananassa HOM05D006722 ORTHO05D007944 2.9e-09 65.9 122 41.8
CSS0036536 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 6.5e-09 64.7 114 40.4
Sopen07g028260 Solanum pennellii HOM05D006722 ORTHO05D007944 6.5e-09 64.7 99 42.4
Solyc07g054310.3 Solanum lycopersicum HOM05D006722 ORTHO05D007944 1.1e-08 63.9 99 41.4
Glyma.13G299400 Glycine max HOM05D006722 ORTHO05D007944 1.5e-08 63.5 132 38.6
CSS0017413 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 3.2e-08 62.4 132 40.2
CSS0029289 Camellia sinensis var. sinensis HOM05D006722 ORTHO05D007944 3.2e-08 62.4 103 45.6
Prupe.3G234900 Prunus persica HOM05D006722 ORTHO05D007944 3.2e-08 62.4 134 36.6
Actinidia09877 Actinidia chinensis HOM05D006722 ORTHO05D007944 4.2e-08 62.0 133 34.6
RcHm_v2.0_Chr2g0162351 Rosa chinensis HOM05D006722 ORTHO05D007944 4.2e-08 62.0 135 39.3
Lj3g0012520 Lotus japonicus HOM05D006722 ORTHO05D007944 5.5e-08 61.6 128 37.5
Gohir.A03G158500 Gossypium hirsutum HOM05D006722 ORTHO05D007944 7.2e-08 61.2 134 36.6
Gohir.D02G181700 Gossypium hirsutum HOM05D006722 ORTHO05D007944 7.2e-08 61.2 134 36.6
Gorai.005G204200 Gossypium raimondii HOM05D006722 ORTHO05D007944 7.2e-08 61.2 134 36.6
HanXRQChr10g0289571 Helianthus annuus HOM05D006722 ORTHO05D007944 7.2e-08 61.2 93 47.3
Rhsim06G0148800 Rhododendron simsii HOM05D006722 ORTHO05D007944 7.2e-08 61.2 134 32.8
Lsat_1_v5_gn_3_39421 Lactuca sativa HOM05D006722 ORTHO05D007944 1.6e-07 60.1 89 47.2
Ciclev10017219m.g Citrus clementina HOM05D006722 ORTHO05D007944 2.7e-07 59.3 124 36.3
Gohir.D12G141200 Gossypium hirsutum HOM05D006722 ORTHO05D007944 3.6e-07 58.9 127 39.4
MD17G1079900 Malus domestica HOM05D006722 ORTHO05D007944 6.1e-07 58.2 135 38.5
Peaxi162Scf00132g00074 Petunia axillaris HOM05D006722 ORTHO05D007944 8.0e-07 57.8 130 38.5
Lj3g0001103 Lotus japonicus HOM05D006722 ORTHO05D007944 1.4e-06 57.0 121 33.1
DCAR_006246 Daucus carota HOM05D006722 ORTHO05D007944 2.3e-06 56.2 126 39.7
PGR042G1420 Punica granatum HOM05D006722 ORTHO05D007944 5.2e-06 55.1 130 33.1
Eucgr.A01793 Eucalyptus grandis HOM05D006722 ORTHO05D007944 8.8e-06 54.3 124 36.3
TPR.G35552 Trifolium pratense HOM05D006722 ORTHO05D007944 8.8e-06 54.3 135 34.8


User provided reference genes

Program Settings