Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G53460 Arabidopsis lyrata HOM05D024755 ORTHO05D023668 6.3e-53 210.3 93 100.0
AT2G20463 Arabidopsis thaliana HOM05D024755 ORTHO05D023668 1.6e-32 142.5 91 69.2
Carub.0003s3487 Capsella rubella HOM05D024755 ORTHO05D023668 5.4e-20 100.9 89 50.6
Carub.0003s3488 Capsella rubella HOM05D024755 ORTHO05D023668 5.4e-20 100.9 89 50.6
Carub.0003s3485 Capsella rubella HOM05D024755 ORTHO05D038745 7.6e-14 80.5 80 48.8
Carub.0003s2968 Capsella rubella HOM05D018394 ORTHO05D023668 1.6e-11 72.8 82 42.7
AT2G20465 Arabidopsis thaliana HOM05D018394 ORTHO05D038745 3.0e-10 68.6 87 41.4
BraA06t24784Z Brassica rapa HOM05D009157 ORTHO05D011114 3.3e-09 65.1 82 39.0
AT1G15757 Arabidopsis thaliana HOM05D009997 ORTHO05D013470 3.6e-08 61.6 86 39.5
AT2G40995 Arabidopsis thaliana HOM05D009157 ORTHO05D011114 3.6e-08 61.6 84 41.7
BraA06t24778Z Brassica rapa HOM05D009157 ORTHO05D011114 4.8e-08 61.2 82 37.8
AL2G14480 Arabidopsis lyrata HOM05D012646 ORTHO05D017422 6.2e-08 60.8 89 33.7
A06p16760 Brassica napus HOM05D009157 ORTHO05D011114 8.1e-08 60.5 77 39.0
C05p19330 Brassica napus HOM05D009157 ORTHO05D011114 1.4e-07 59.7 82 36.6
Carub.0002s0346 Capsella rubella HOM05D012646 ORTHO05D017422 1.8e-07 59.3 89 37.1
Carub.0002s0340 Capsella rubella HOM05D012646 ORTHO05D017422 3.1e-07 58.5 89 40.4
Carub.0003s2969 Capsella rubella HOM05D018394 ORTHO05D114269 3.1e-07 58.5 82 39.0
Carub.0004s2332 Capsella rubella HOM05D009157 ORTHO05D011114 3.1e-07 58.5 87 34.5
AT4G08028 Arabidopsis thaliana HOM05D009779 ORTHO05D011114 5.3e-07 57.8 77 44.2
C08p04600 Brassica napus HOM05D009157 ORTHO05D028203 5.3e-07 57.8 77 41.6
BolC8t47264H Brassica oleracea HOM05D009157 ORTHO05D028203 5.3e-07 57.8 77 41.6
Carub.0003s2909 Capsella rubella HOM05D018394 ORTHO05D114084 5.3e-07 57.8 74 43.2
BolC5t30635H Brassica oleracea HOM05D009157 ORTHO05D011114 1.5e-06 56.2 89 36.0
BraA06t24782Z Brassica rapa HOM05D009157 ORTHO05D011114 1.5e-06 56.2 89 34.8
Carub.0002s0341 Capsella rubella HOM05D012646 ORTHO05D017422 1.5e-06 56.2 91 35.2
A06p16740 Brassica napus HOM05D009157 ORTHO05D011114 2.6e-06 55.5 89 36.0
A09p10320 Brassica napus HOM05D009058 ORTHO05D010761 2.6e-06 55.5 83 36.1
BraA04t18722Z Brassica rapa HOM05D009779 ORTHO05D033680 2.6e-06 55.5 86 32.6
BraA08t32459Z Brassica rapa HOM05D009157 ORTHO05D028203 2.6e-06 55.5 77 39.0
AL1G48580 Arabidopsis lyrata HOM05D009157 ORTHO05D011114 4.4e-06 54.7 82 37.8
A08p04330 Brassica napus HOM05D009157 ORTHO05D028203 4.4e-06 54.7 77 39.0
Carub.0005s0711 Capsella rubella HOM05D009157 ORTHO05D011114 4.4e-06 54.7 85 40.0
AT2G12465 Arabidopsis thaliana HOM05D008895 ORTHO05D010761 5.8e-06 54.3 87 40.2
BraA07t29157Z Brassica rapa HOM05D009997 ORTHO05D011114 7.6e-06 53.9 84 34.5
A05p41130 Brassica napus HOM05D029002 ORTHO05D027863 9.9e-06 53.5 82 39.0
C05p60310 Brassica napus HOM05D029002 ORTHO05D027863 9.9e-06 53.5 82 39.0
BolC5t34679H Brassica oleracea HOM05D029002 ORTHO05D027863 9.9e-06 53.5 82 39.0


User provided reference genes

Program Settings