Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G52910 Arabidopsis lyrata HOM05D010802 ORTHO05D012953 4.1e-52 208.0 121 100.0
AT2G19000 Arabidopsis thaliana HOM05D010802 ORTHO05D012953 1.5e-46 189.5 124 91.1
Carub.0003s3326 Capsella rubella HOM05D010802 ORTHO05D012953 4.9e-37 157.9 122 76.2
C07p03440 Brassica napus HOM05D010802 ORTHO05D012953 5.2e-31 137.9 126 59.5
BolC7t40743H Brassica oleracea HOM05D010802 ORTHO05D012953 5.2e-31 137.9 126 59.5
Thhalv10022963m.g Eutrema salsugineum HOM05D010802 ORTHO05D012953 5.2e-31 137.9 119 62.2
BcaB03g16697 Brassica carinata HOM05D010802 ORTHO05D012953 8.9e-31 137.1 128 60.2
A07p01670 Brassica napus HOM05D010802 ORTHO05D012953 3.4e-30 135.2 126 57.9
BraA07t27969Z Brassica rapa HOM05D010802 ORTHO05D012953 3.4e-30 135.2 126 57.9
CARHR109520 Cardamine hirsuta HOM05D010802 ORTHO05D012953 3.4e-30 135.2 120 61.7
Sp3g32430 Schrenkiella parvula HOM05D010802 ORTHO05D012953 5.7e-30 134.4 117 59.8
BcaC06g36515 Brassica carinata HOM05D010802 ORTHO05D012953 5.4e-28 127.9 114 59.6
BcaC04g22871 Brassica carinata HOM05D010802 ORTHO05D012953 1.6e-27 126.3 119 58.8
BolC9t54342H Brassica oleracea HOM05D010802 ORTHO05D012953 1.6e-27 126.3 119 58.8
BcaB07g31627 Brassica carinata HOM05D010802 ORTHO05D012953 5.9e-27 124.4 116 58.6
A09p12160 Brassica napus HOM05D010802 ORTHO05D012953 1.7e-26 122.9 119 56.3
C09p14380 Brassica napus HOM05D010802 ORTHO05D012953 1.7e-26 122.9 119 56.3
BraA09t36860Z Brassica rapa HOM05D010802 ORTHO05D012953 1.7e-26 122.9 119 56.3
Aa31LG8G16070 Aethionema arabicum HOM05D010802 ORTHO05D012953 2.5e-09 65.9 128 38.3
Os12g0634700 Oryza sativa ssp. japonica HOM05D004792 ORTHO05D005789 1.6e-08 63.2 62 46.8
AL7G32380 Arabidopsis lyrata HOM05D004792 ORTHO05D005789 4.4e-06 55.1 129 45.0
Thhalv10026556m.g Eutrema salsugineum HOM05D004792 ORTHO05D005789 7.6e-06 54.3 131 42.0
Zm00001eb092170 Zea mays HOM05D004792 ORTHO05D005789 9.9e-06 53.9 50 48.0


User provided reference genes

Program Settings