Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G52890 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 1.1e-36 156.0 73 100.0
AT2G19030 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 2.7e-35 151.4 73 95.9
AT2G19045 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 4.7e-35 150.6 73 95.9
AT2G19040 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 3.0e-34 147.9 73 95.9
AL3G52880 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 3.8e-29 131.0 70 87.1
Carub.0003s3341 Capsella rubella HOM05D008462 ORTHO05D010511 5.5e-28 127.1 73 79.5
Carub.0003s3328 Capsella rubella HOM05D008462 ORTHO05D010511 7.2e-28 126.7 73 79.5
AT2G19020 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 1.3e-24 115.9 74 77.0
Sp3g32450 Schrenkiella parvula HOM05D008462 ORTHO05D010511 1.1e-20 102.8 73 61.6
Thhalv10023138m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 8.0e-19 96.7 73 61.6
BcaB03g16703 Brassica carinata HOM05D000065 ORTHO05D000162 6.8e-18 93.6 59 66.1
CARHR109540 Cardamine hirsuta HOM05D008462 ORTHO05D010511 1.2e-17 92.8 73 60.3
AT3G25170 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 2.4e-15 85.1 75 53.3
AL3G40860 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 1.6e-14 82.4 75 52.0
Sp3g22770 Schrenkiella parvula HOM05D008462 ORTHO05D010511 1.6e-14 82.4 74 52.7
Thhalv10002753m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 4.6e-14 80.9 74 51.4
Thhalv10026849m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 4.6e-14 80.9 73 53.4
BcaB07g31637 Brassica carinata HOM05D008462 ORTHO05D010511 5.9e-14 80.5 71 54.9
BcaC04g22878 Brassica carinata HOM05D008462 ORTHO05D010511 5.9e-14 80.5 72 52.8
C09p14320 Brassica napus HOM05D008462 ORTHO05D010511 5.9e-14 80.5 72 52.8
BolC9t54335H Brassica oleracea HOM05D008462 ORTHO05D010511 5.9e-14 80.5 72 52.8
CARHR105300 Cardamine hirsuta HOM05D008462 ORTHO05D010511 5.9e-14 80.5 59 62.7
CARHR101500 Cardamine hirsuta HOM05D008462 ORTHO05D010511 2.9e-13 78.2 73 50.7
Aa31sc95G170 Aethionema arabicum HOM05D008462 ORTHO05D010511 3.9e-13 77.8 76 50.0
A07p07140 Brassica napus HOM05D008462 ORTHO05D010511 1.1e-12 76.3 73 54.8
BraA07t28500Z Brassica rapa HOM05D008462 ORTHO05D010511 1.1e-12 76.3 73 54.8
BcaC06g35797 Brassica carinata HOM05D008462 ORTHO05D010511 1.2e-11 72.8 73 52.1
C07p10750 Brassica napus HOM05D008462 ORTHO05D010511 1.2e-11 72.8 73 52.1
BolC7t41541H Brassica oleracea HOM05D008462 ORTHO05D010511 1.2e-11 72.8 73 52.1
Eucgr.L02596 Eucalyptus grandis HOM05D008462 ORTHO05D010511 4.7e-11 70.9 73 49.3
AL9U11140 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 1.8e-10 68.9 74 45.9
Carub.0003s2550 Capsella rubella HOM05D008462 ORTHO05D010511 3.1e-10 68.2 76 48.7
AL3G40850 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 4.0e-10 67.8 75 50.7
BcaB04g21014 Brassica carinata HOM05D023045 ORTHO05D024329 4.0e-10 67.8 66 43.9
AT4G13075 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 6.8e-10 67.0 74 45.9
CARHR101510 Cardamine hirsuta HOM05D008462 ORTHO05D010511 2.6e-09 65.1 76 44.7
BcaC06g30603 Brassica carinata HOM05D008462 ORTHO05D010511 3.4e-09 64.7 70 48.6
THA.LOC109116491 Tarenaya hassleriana HOM05D008462 ORTHO05D010511 3.4e-09 64.7 48 52.1
CARHR101490 Cardamine hirsuta HOM05D008462 ORTHO05D010511 5.8e-09 63.9 74 47.3
BcaNung02684 Brassica carinata HOM05D008462 ORTHO05D010511 7.5e-09 63.5 70 50.0
C07p50070 Brassica napus HOM05D008462 ORTHO05D010511 7.5e-09 63.5 70 50.0
BolC7t45511H Brassica oleracea HOM05D008462 ORTHO05D010511 7.5e-09 63.5 70 50.0
Eucgr.E01763 Eucalyptus grandis HOM05D008462 ORTHO05D010511 7.5e-09 63.5 70 44.3
Eucgr.L02598 Eucalyptus grandis HOM05D009215 ORTHO05D010511 1.7e-08 62.4 70 44.3
BcaB06g28566 Brassica carinata HOM05D008462 ORTHO05D010511 2.2e-08 62.0 70 47.1
BraA03t14245Z Brassica rapa HOM05D008462 ORTHO05D010511 2.2e-08 62.0 70 48.6
BcaC06g30601 Brassica carinata HOM05D008462 ORTHO05D010511 2.9e-08 61.6 71 47.9
Gohir.A03G013100 Gossypium hirsutum HOM05D009215 ORTHO05D010851 3.7e-08 61.2 74 44.6
AT3G25165 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 6.4e-08 60.5 72 47.2
Sed0003068 Sechium edule HOM05D010794 ORTHO05D013590 6.4e-08 60.5 72 44.4
C07p01380 Brassica napus HOM05D008462 ORTHO05D010511 4.1e-07 57.8 77 45.5
CsaV3_UNG233300 Cucumis sativus L. HOM05D010794 ORTHO05D013590 5.4e-07 57.4 74 40.5
C05p61600 Brassica napus HOM05D008462 ORTHO05D010511 7.0e-07 57.0 77 45.5
A01p40150 Brassica napus HOM05D023045 ORTHO05D024329 9.2e-07 56.6 75 40.0
BraA01t04055Z Brassica rapa HOM05D023045 ORTHO05D024329 9.2e-07 56.6 75 40.0
Nn1g08163 Nelumbo nucifera HOM05D057550 ORTHO05D010511 1.2e-06 56.2 71 43.7
BolC7t45509H Brassica oleracea HOM05D000817 ORTHO05D000702 7.8e-06 53.5 68 48.5


User provided reference genes

Program Settings