Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G51480 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 9.1e-87 323.6 165 100.0
AL3G12590 Arabidopsis lyrata HOM05D010286 ORTHO05D012603 2.2e-72 275.8 165 86.7
AL8G10620 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 1.1e-44 183.7 162 60.5
AL5G19890 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 1.5e-44 183.3 162 60.5
AL5G20070 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 1.5e-44 183.3 162 60.5
AL1G58110 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 3.3e-44 182.2 162 59.9
AL6G41320 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 5.6e-44 181.4 162 59.9
AL9U10530 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 3.6e-43 178.7 162 58.6
AL3G46750 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 8.1e-43 177.6 162 58.6
AL3G51240 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 4.9e-40 168.3 162 57.4
AL8G20120 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 8.1e-35 151.0 137 57.7
Carub.0007s3110 Capsella rubella HOM05D010286 ORTHO05D000309 2.1e-30 136.3 162 48.1
AL4G17480 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 7.3e-28 127.9 96 65.6
BcaC06g34090 Brassica carinata HOM05D007774 ORTHO05D000309 7.6e-25 117.9 138 47.8
BcaNung03185 Brassica carinata HOM05D007774 ORTHO05D000309 1.1e-23 114.0 120 51.7
BcaB01g02983 Brassica carinata HOM05D007774 ORTHO05D000309 3.0e-21 105.9 120 48.3
Carub.0004s0648 Capsella rubella HOM05D010286 ORTHO05D000309 2.5e-20 102.8 164 39.0
BraA02t06986Z Brassica rapa HOM05D007774 ORTHO05D000309 5.3e-18 95.1 119 47.9
BolC2t09377H Brassica oleracea HOM05D007774 ORTHO05D000309 4.5e-17 92.0 112 42.9
BcaC01g01743 Brassica carinata HOM05D007774 ORTHO05D000309 7.6e-17 91.3 104 50.0
BcaC02g10455 Brassica carinata HOM05D007774 ORTHO05D000309 1.7e-16 90.1 118 42.4
AL8G21820 Arabidopsis lyrata HOM05D007774 ORTHO05D000309 4.9e-16 88.6 105 44.8
Carub.0008s0717 Capsella rubella HOM05D010286 ORTHO05D000309 4.9e-16 88.6 142 35.9
BolC6t36100H Brassica oleracea HOM05D007774 ORTHO05D000309 6.4e-16 88.2 98 49.0
Carub.0029s0002 Capsella rubella HOM05D010286 ORTHO05D011981 6.4e-16 88.2 135 36.3
BcaB01g02010 Brassica carinata HOM05D007774 ORTHO05D000309 1.4e-15 87.0 101 46.5
BcaB08g35933 Brassica carinata HOM05D007774 ORTHO05D000309 3.2e-15 85.9 101 45.5
BcaNung05585 Brassica carinata HOM05D007774 ORTHO05D000309 3.2e-15 85.9 101 45.5
Carub.0001s3344 Capsella rubella HOM05D010286 ORTHO05D000309 2.7e-14 82.8 162 35.2
Carub.0029s0004 Capsella rubella HOM05D010286 ORTHO05D011981 3.5e-14 82.4 162 32.1
BcaB03g16083 Brassica carinata HOM05D007774 ORTHO05D000309 6.0e-14 81.6 101 45.5
BcaC02g10427 Brassica carinata HOM05D007774 ORTHO05D000309 7.9e-14 81.3 106 45.3
BcaC04g22268 Brassica carinata HOM05D007774 ORTHO05D000309 7.9e-14 81.3 104 41.3
BcaB06g27901 Brassica carinata HOM05D007774 ORTHO05D000309 1.0e-13 80.9 107 43.9
BcaC08g45193 Brassica carinata HOM05D007774 ORTHO05D000309 1.0e-13 80.9 104 44.2
BcaB07g33982 Brassica carinata HOM05D007774 ORTHO05D000309 1.8e-13 80.1 104 41.3
BcaB07g33250 Brassica carinata HOM05D007774 ORTHO05D000309 3.9e-13 79.0 107 43.0
BcaB06g26191 Brassica carinata HOM05D007774 ORTHO05D000309 5.1e-13 78.6 104 40.4
BcaB01g02175 Brassica carinata HOM05D007774 ORTHO05D000309 6.7e-13 78.2 89 44.9
BraA02t08177Z Brassica rapa HOM05D007774 ORTHO05D000309 6.7e-13 78.2 104 41.3
BcaB06g27506 Brassica carinata HOM05D007774 ORTHO05D000309 8.7e-13 77.8 96 42.7
BcaC02g10529 Brassica carinata HOM05D007774 ORTHO05D000309 8.7e-13 77.8 104 42.3
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 8.7e-13 77.8 104 45.2
BcaB02g11020 Brassica carinata HOM05D007774 ORTHO05D000309 1.5e-12 77.0 119 37.0
BolC4t24443H Brassica oleracea HOM05D007774 ORTHO05D000309 1.9e-12 76.6 106 43.4
BcaC04g20915 Brassica carinata HOM05D007774 ORTHO05D000309 3.3e-12 75.9 120 35.8
BolC3t19075H Brassica oleracea HOM05D007774 ORTHO05D000309 3.3e-12 75.9 120 35.8
BcaB05g22492 Brassica carinata HOM05D007774 ORTHO05D000309 4.3e-12 75.5 119 37.0
BcaB05g22493 Brassica carinata HOM05D007774 ORTHO05D000309 4.3e-12 75.5 119 37.0
BraA09t41073Z Brassica rapa HOM05D007774 ORTHO05D000309 7.4e-12 74.7 103 46.6
BcaB08g35546 Brassica carinata HOM05D007774 ORTHO05D000309 9.6e-12 74.3 99 43.4
AL7G49570 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 2.1e-11 73.2 49 69.4
BcaC02g09596 Brassica carinata HOM05D007774 ORTHO05D000309 3.7e-11 72.4 117 37.6
BcaC04g20923 Brassica carinata HOM05D007774 ORTHO05D000395 6.2e-11 71.6 87 47.1
BcaB05g23917 Brassica carinata HOM05D007774 ORTHO05D000309 1.1e-10 70.9 119 37.0
C09p37880 Brassica napus HOM05D001038 ORTHO05D000395 1.1e-10 70.9 87 46.0
BolC9t56621H Brassica oleracea HOM05D001038 ORTHO05D000395 1.1e-10 70.9 87 46.0
A01p38280 Brassica napus HOM05D001038 ORTHO05D000395 1.8e-10 70.1 85 47.1
BolC8t49307H Brassica oleracea HOM05D007774 ORTHO05D000309 3.1e-10 69.3 85 42.4
BcaB03g16006 Brassica carinata HOM05D007774 ORTHO05D000309 4.0e-10 68.9 99 37.4
BcaB08g36585 Brassica carinata HOM05D007774 ORTHO05D000309 5.3e-10 68.6 104 37.5
BcaC06g36173 Brassica carinata HOM05D007774 ORTHO05D000309 6.9e-10 68.2 103 40.8
BcaC06g35818 Brassica carinata HOM05D007774 ORTHO05D000309 9.0e-10 67.8 119 34.5
BolC6t37988H Brassica oleracea HOM05D007774 ORTHO05D000309 1.5e-09 67.0 85 43.5
BraA02t07615Z Brassica rapa HOM05D007774 ORTHO05D000309 1.5e-09 67.0 120 37.5
BcaB06g27418 Brassica carinata HOM05D007774 ORTHO05D000309 2.0e-09 66.6 79 48.1
BcaC06g36128 Brassica carinata HOM05D007774 ORTHO05D000395 3.4e-09 65.9 87 43.7
BolC5t33238H Brassica oleracea HOM05D007774 ORTHO05D000309 3.4e-09 65.9 67 50.7
BcaC08g43835 Brassica carinata HOM05D007774 ORTHO05D000309 4.5e-09 65.5 103 39.8
BolC9t53939H Brassica oleracea HOM05D007774 ORTHO05D000309 4.5e-09 65.5 69 50.7
C07p07480 Brassica napus HOM05D001038 ORTHO05D000395 5.8e-09 65.1 87 42.5
BolC2t09463H Brassica oleracea HOM05D007774 ORTHO05D000309 5.8e-09 65.1 69 50.7
BolC7t41165H Brassica oleracea HOM05D007774 ORTHO05D000309 5.8e-09 65.1 87 42.5
BcaC01g02929 Brassica carinata HOM05D007774 ORTHO05D000309 2.9e-08 62.8 81 45.7
BcaB05g24508 Brassica carinata HOM05D001224 ORTHO05D000309 4.9e-08 62.0 91 39.6
BcaB06g26508 Brassica carinata HOM05D007774 ORTHO05D000309 8.4e-08 61.2 95 37.9
BcaB02g11517 Brassica carinata HOM05D007774 ORTHO05D000309 1.1e-07 60.8 91 38.5
BcaB06g26754 Brassica carinata HOM05D007774 ORTHO05D000309 1.1e-07 60.8 91 38.5
BcaB06g27138 Brassica carinata HOM05D007774 ORTHO05D000309 1.1e-07 60.8 91 38.5
BcaC05g26851 Brassica carinata HOM05D007774 ORTHO05D000309 2.5e-07 59.7 75 45.3
BcaB02g11205 Brassica carinata HOM05D007774 ORTHO05D000309 3.2e-07 59.3 91 37.4
BcaB06g26683 Brassica carinata HOM05D007774 ORTHO05D000309 3.2e-07 59.3 91 37.4
BcaB02g11450 Brassica carinata HOM05D007774 ORTHO05D000309 7.1e-07 58.2 111 35.1
Eucgr.L01799 Eucalyptus grandis HOM05D001383 ORTHO05D000309 9.3e-07 57.8 71 43.7
Hma1.2p1_1389F.1_g280030 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 9.3e-07 57.8 116 31.0
vmacro14264 Vaccinium macrocarpon HOM05D008126 ORTHO05D000309 1.2e-06 57.4 90 37.8
BcaB02g11463 Brassica carinata HOM05D001224 ORTHO05D000309 1.6e-06 57.0 86 39.5
BolC8t49310H Brassica oleracea HOM05D007774 ORTHO05D000309 1.6e-06 57.0 108 38.0
CARHR186880 Cardamine hirsuta HOM05D010286 ORTHO05D000309 2.1e-06 56.6 142 28.9
Cfa017775 Carpinus fangiana HOM05D016218 ORTHO05D000309 2.1e-06 56.6 75 37.3
Eucgr.L02007 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.1e-06 56.6 110 34.5
Hma1.2p1_0128F.1_g059990 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.1e-06 56.6 57 49.1
Psat0s2572g0080 Pisum sativum HOM05D018012 ORTHO05D000309 2.1e-06 56.6 113 32.7
Cfa012747 Carpinus fangiana HOM05D016218 ORTHO05D000309 2.7e-06 56.2 75 37.3
Eucgr.L02287 Eucalyptus grandis HOM05D001383 ORTHO05D000309 2.7e-06 56.2 116 33.6
AL6G38890 Arabidopsis lyrata HOM05D008073 ORTHO05D000309 3.5e-06 55.8 142 33.1
Eucgr.E03636 Eucalyptus grandis HOM05D001383 ORTHO05D000309 3.5e-06 55.8 101 34.7
Eucgr.J01886 Eucalyptus grandis HOM05D001383 ORTHO05D000309 3.5e-06 55.8 60 46.7
Hma1.2p1_1051F.1_g252070 Hydrangea macrophylla HOM05D008126 ORTHO05D000309 3.5e-06 55.8 59 47.5
BcaB06g26646 Brassica carinata HOM05D007774 ORTHO05D000309 4.6e-06 55.5 90 37.8
Eucgr.A00047 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.6e-06 55.5 110 32.7
Eucgr.E03477 Eucalyptus grandis HOM05D001383 ORTHO05D000309 4.6e-06 55.5 60 46.7
TPR.G31023 Trifolium pratense HOM05D019053 ORTHO05D020883 4.6e-06 55.5 61 45.9
Eucgr.H02671 Eucalyptus grandis HOM05D001383 ORTHO05D000309 6.0e-06 55.1 120 31.7
Cfa020977 Carpinus fangiana HOM05D016218 ORTHO05D000309 7.9e-06 54.7 76 36.8
Eucgr.C02166 Eucalyptus grandis HOM05D001383 ORTHO05D000309 7.9e-06 54.7 66 43.9
Eucgr.D00391 Eucalyptus grandis HOM05D001383 ORTHO05D000309 7.9e-06 54.7 60 46.7
Hma1.2p1_0224F.1_g094550 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 7.9e-06 54.7 63 44.4


User provided reference genes

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