Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G51240 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 7.8e-86 320.5 166 100.0
AL5G19890 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 5.8e-81 304.3 166 94.6
AL5G20070 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 5.8e-81 304.3 166 94.6
AL1G58110 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 1.3e-80 303.1 166 94.0
AL6G41320 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 2.2e-80 302.4 166 94.0
AL8G10620 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 6.4e-80 300.8 166 93.4
AL9U10530 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 4.1e-79 298.1 166 93.4
AL3G46750 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 5.4e-79 297.7 166 92.2
AL8G20120 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 4.3e-60 235.0 134 88.8
AL3G12590 Arabidopsis lyrata HOM05D010286 ORTHO05D012603 1.1e-44 183.7 162 61.1
AL3G51480 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 8.4e-40 167.5 162 57.4
AL4G17480 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 3.9e-37 158.7 95 81.1
Carub.0007s3110 Capsella rubella HOM05D010286 ORTHO05D000309 4.0e-26 122.1 160 43.1
BcaC06g34090 Brassica carinata HOM05D007774 ORTHO05D000309 6.5e-24 114.8 137 48.9
BcaNung03185 Brassica carinata HOM05D007774 ORTHO05D000309 9.3e-23 110.9 120 51.7
BcaB01g02983 Brassica carinata HOM05D007774 ORTHO05D000309 5.7e-20 101.7 120 49.2
Carub.0029s0002 Capsella rubella HOM05D010286 ORTHO05D011981 2.6e-17 92.8 131 38.9
AL8G21820 Arabidopsis lyrata HOM05D007774 ORTHO05D000309 1.3e-16 90.5 115 42.6
BolC2t09377H Brassica oleracea HOM05D007774 ORTHO05D000309 1.7e-16 90.1 103 51.5
Carub.0004s0648 Capsella rubella HOM05D010286 ORTHO05D000309 2.2e-16 89.7 142 38.0
BcaC02g10427 Brassica carinata HOM05D007774 ORTHO05D000309 2.9e-16 89.4 107 44.9
Carub.0008s0717 Capsella rubella HOM05D010286 ORTHO05D000309 1.1e-15 87.4 140 37.1
Carub.0001s3344 Capsella rubella HOM05D010286 ORTHO05D000309 1.9e-15 86.7 151 36.4
BolC6t36100H Brassica oleracea HOM05D007774 ORTHO05D000309 5.5e-15 85.1 93 52.7
BraA02t06986Z Brassica rapa HOM05D007774 ORTHO05D000309 7.2e-15 84.7 113 43.4
BcaC01g01743 Brassica carinata HOM05D007774 ORTHO05D000309 3.6e-14 82.4 105 49.5
BcaC02g10455 Brassica carinata HOM05D007774 ORTHO05D000309 6.1e-14 81.6 103 48.5
BcaB03g16083 Brassica carinata HOM05D007774 ORTHO05D000309 7.9e-14 81.3 114 42.1
BcaB01g02010 Brassica carinata HOM05D007774 ORTHO05D000309 1.0e-13 80.9 114 42.1
BcaB08g35933 Brassica carinata HOM05D007774 ORTHO05D000309 1.0e-13 80.9 116 41.4
BraA09t41073Z Brassica rapa HOM05D007774 ORTHO05D000309 1.4e-13 80.5 103 45.6
BraA02t08177Z Brassica rapa HOM05D007774 ORTHO05D000309 1.8e-13 80.1 100 46.0
BcaB06g27901 Brassica carinata HOM05D007774 ORTHO05D000309 2.3e-13 79.7 101 42.6
BcaNung05585 Brassica carinata HOM05D007774 ORTHO05D000309 2.3e-13 79.7 114 41.2
BcaB03g16006 Brassica carinata HOM05D007774 ORTHO05D000309 5.1e-13 78.6 99 39.4
BcaC08g45193 Brassica carinata HOM05D007774 ORTHO05D000309 5.1e-13 78.6 100 46.0
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 5.1e-13 78.6 91 46.2
BcaC02g10529 Brassica carinata HOM05D007774 ORTHO05D000309 8.8e-13 77.8 100 46.0
BcaC04g22268 Brassica carinata HOM05D007774 ORTHO05D000309 8.8e-13 77.8 118 42.4
A01p38280 Brassica napus HOM05D001038 ORTHO05D000395 8.8e-13 77.8 89 47.2
BcaB06g26508 Brassica carinata HOM05D007774 ORTHO05D000309 1.1e-12 77.4 95 45.3
Carub.0029s0004 Capsella rubella HOM05D010286 ORTHO05D011981 1.1e-12 77.4 140 35.0
BcaB07g33250 Brassica carinata HOM05D007774 ORTHO05D000309 1.5e-12 77.0 101 41.6
BcaB02g11517 Brassica carinata HOM05D007774 ORTHO05D000309 2.5e-12 76.3 96 44.8
BcaB06g26754 Brassica carinata HOM05D007774 ORTHO05D000309 2.5e-12 76.3 96 44.8
BcaB06g27138 Brassica carinata HOM05D007774 ORTHO05D000309 2.5e-12 76.3 96 44.8
BcaB06g27506 Brassica carinata HOM05D007774 ORTHO05D000309 2.5e-12 76.3 96 44.8
BcaB06g26191 Brassica carinata HOM05D007774 ORTHO05D000309 3.3e-12 75.9 100 45.0
BcaB07g33982 Brassica carinata HOM05D007774 ORTHO05D000309 3.3e-12 75.9 105 43.8
BcaB01g02175 Brassica carinata HOM05D007774 ORTHO05D000309 4.3e-12 75.5 101 40.6
BcaB02g11020 Brassica carinata HOM05D007774 ORTHO05D000309 4.3e-12 75.5 118 40.7
BolC3t19075H Brassica oleracea HOM05D007774 ORTHO05D000309 5.7e-12 75.1 118 40.7
BcaB02g11205 Brassica carinata HOM05D007774 ORTHO05D000309 7.4e-12 74.7 96 43.8
BcaB05g22492 Brassica carinata HOM05D007774 ORTHO05D000309 7.4e-12 74.7 107 41.1
BcaB05g22493 Brassica carinata HOM05D007774 ORTHO05D000309 7.4e-12 74.7 107 41.1
BcaB06g26683 Brassica carinata HOM05D007774 ORTHO05D000309 7.4e-12 74.7 96 43.8
BolC4t24443H Brassica oleracea HOM05D007774 ORTHO05D000309 9.7e-12 74.3 107 40.2
BcaC04g20923 Brassica carinata HOM05D007774 ORTHO05D000395 1.3e-11 73.9 117 41.9
BcaC06g36173 Brassica carinata HOM05D007774 ORTHO05D000309 1.3e-11 73.9 99 45.5
BcaB08g35546 Brassica carinata HOM05D007774 ORTHO05D000309 2.2e-11 73.2 90 47.8
BcaB04g16980 Brassica carinata HOM05D007774 ORTHO05D000309 4.8e-11 72.0 96 44.8
BcaB05g24508 Brassica carinata HOM05D001224 ORTHO05D000309 4.8e-11 72.0 83 44.6
BcaC04g20915 Brassica carinata HOM05D007774 ORTHO05D000309 4.8e-11 72.0 118 40.7
BcaC02g09596 Brassica carinata HOM05D007774 ORTHO05D000309 8.2e-11 71.2 108 41.7
BcaC06g36128 Brassica carinata HOM05D007774 ORTHO05D000395 8.2e-11 71.2 100 41.0
C09p37880 Brassica napus HOM05D001038 ORTHO05D000395 8.2e-11 71.2 145 36.6
BolC9t56621H Brassica oleracea HOM05D001038 ORTHO05D000395 8.2e-11 71.2 145 36.6
BcaB02g11463 Brassica carinata HOM05D001224 ORTHO05D000309 1.8e-10 70.1 83 44.6
BcaB06g27418 Brassica carinata HOM05D007774 ORTHO05D000309 1.8e-10 70.1 90 45.6
C07p07480 Brassica napus HOM05D001038 ORTHO05D000395 3.1e-10 69.3 100 40.0
BolC7t41165H Brassica oleracea HOM05D007774 ORTHO05D000309 3.1e-10 69.3 100 40.0
BcaC08g43835 Brassica carinata HOM05D007774 ORTHO05D000309 4.1e-10 68.9 99 43.4
BcaC01g02929 Brassica carinata HOM05D007774 ORTHO05D000309 1.2e-09 67.4 105 41.9
BcaB06g26646 Brassica carinata HOM05D007774 ORTHO05D000309 2.0e-09 66.6 95 42.1
BcaB05g23917 Brassica carinata HOM05D007774 ORTHO05D000309 2.6e-09 66.2 106 39.6
BcaB08g36585 Brassica carinata HOM05D007774 ORTHO05D000309 7.7e-09 64.7 99 41.4
BolC8t49310H Brassica oleracea HOM05D007774 ORTHO05D000309 7.7e-09 64.7 99 38.4
AL7G49570 Arabidopsis lyrata HOM05D010286 ORTHO05D000309 1.3e-08 63.9 49 57.1
BraA02t07615Z Brassica rapa HOM05D007774 ORTHO05D000309 2.9e-08 62.8 118 37.3
BolC8t49307H Brassica oleracea HOM05D007774 ORTHO05D000309 5.0e-08 62.0 97 40.2
BcaC05g26851 Brassica carinata HOM05D007774 ORTHO05D000309 8.5e-08 61.2 80 46.2
BcaC06g35818 Brassica carinata HOM05D007774 ORTHO05D000309 1.1e-07 60.8 117 31.6
BcaB02g11450 Brassica carinata HOM05D007774 ORTHO05D000309 1.9e-07 60.1 127 38.6
A07p31530 Brassica napus HOM05D008073 ORTHO05D000309 2.5e-07 59.7 138 29.0
BcaB05g23793 Brassica carinata HOM05D007774 ORTHO05D000309 4.2e-07 58.9 84 41.7
BcaC06g36745 Brassica carinata HOM05D008073 ORTHO05D031794 7.2e-07 58.2 151 30.5
CARHR186880 Cardamine hirsuta HOM05D010286 ORTHO05D000309 1.6e-06 57.0 110 31.8
BcaC03g15594 Brassica carinata HOM05D000675 ORTHO05D002086 6.1e-06 55.1 82 32.9
Hma1.2p1_0048F.1_g028060 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.1e-06 55.1 117 35.0
Hma1.2p1_1389F.1_g280030 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.1e-06 55.1 117 35.0


User provided reference genes

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