Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G51000 Arabidopsis lyrata HOM05D007514 ORTHO05D009469 4.4e-86 321.2 160 100.0
AT2G17972 Arabidopsis thaliana HOM05D007514 ORTHO05D009469 1.0e-79 300.1 160 93.8
Carub.0003s3210 Capsella rubella HOM05D007514 ORTHO05D009469 1.2e-75 286.6 162 90.7
CARHR108460 Cardamine hirsuta HOM05D007514 ORTHO05D009469 1.8e-71 272.7 163 87.7
Sp3g31390 Schrenkiella parvula HOM05D007514 ORTHO05D009469 1.0e-66 256.9 171 82.5
BcaC06g36349 Brassica carinata HOM05D007514 ORTHO05D009469 1.1e-65 253.4 170 81.8
C07p05010 Brassica napus HOM05D007514 ORTHO05D009469 1.1e-65 253.4 170 81.8
BolC7t40902H Brassica oleracea HOM05D007514 ORTHO05D009469 1.1e-65 253.4 170 81.8
Thhalv10022884m.g Eutrema salsugineum HOM05D007514 ORTHO05D009469 1.9e-65 252.7 170 80.0
A07p02710 Brassica napus HOM05D007514 ORTHO05D009469 3.3e-65 251.9 170 81.8
BraA07t28071Z Brassica rapa HOM05D007514 ORTHO05D009469 3.3e-65 251.9 170 81.8
BcaB03g16581 Brassica carinata HOM05D007514 ORTHO05D009469 7.3e-65 250.8 170 81.2
Aa31LG8G15140 Aethionema arabicum HOM05D007514 ORTHO05D009469 2.3e-50 202.6 177 66.7
THA.LOC104819752 Tarenaya hassleriana HOM05D007514 ORTHO05D009469 1.7e-42 176.4 179 55.9
Potri.005G115000 Populus trichocarpa HOM05D007514 ORTHO05D009469 3.0e-34 149.1 135 59.3
Manes.02G103801 Manihot esculenta HOM05D007514 ORTHO05D009469 1.1e-33 147.1 175 50.9
Lsat_1_v5_gn_3_74241 Lactuca sativa HOM05D007514 ORTHO05D009469 7.3e-33 144.4 106 67.9
Sabra05G0094100 Salix brachista HOM05D007514 ORTHO05D009469 9.6e-33 144.1 108 67.6
Sc16g0002120 Simmondsia chinensis HOM05D007514 ORTHO05D009469 2.1e-32 142.9 106 65.1
Thecc.01G019700 Theobroma cacao HOM05D007514 ORTHO05D009469 3.6e-32 142.1 112 65.2
Migut.L00252 Erythranthe guttata HOM05D007514 ORTHO05D009469 4.8e-32 141.7 105 70.5
Migut.L00394 Erythranthe guttata HOM05D007514 ORTHO05D009469 4.8e-32 141.7 105 70.5
Cpa.g.sc6.242 Carica papaya HOM05D007514 ORTHO05D009469 6.2e-32 141.4 164 48.8
Hma1.2p1_0743F.1_g211610 Hydrangea macrophylla HOM05D007514 ORTHO05D009469 8.1e-32 141.0 104 66.3
Ah.01g021120 Amaranthus hybridus HOM05D007514 ORTHO05D009469 1.4e-31 140.2 108 62.0
Aqoxy5G01772 Aquilegia oxysepala HOM05D007514 ORTHO05D009469 3.1e-31 139.0 168 48.8
AUR62011597 Chenopodium quinoa HOM05D007514 ORTHO05D009469 3.1e-31 139.0 107 62.6
Duzib264G0291 Durio zibethinus HOM05D007514 ORTHO05D009469 3.1e-31 139.0 110 64.5
CSS0010041 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 9.0e-31 137.5 108 64.8
CSS0030936 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 9.0e-31 137.5 108 64.8
VMungo0251G0111 Vigna mungo HOM05D007514 ORTHO05D009469 1.2e-30 137.1 122 57.4
MSTRG.883 Avicennia marina HOM05D007514 ORTHO05D009469 2.6e-30 136.0 106 65.1
Gohir.A02G170200 Gossypium hirsutum HOM05D007514 ORTHO05D009469 2.6e-30 136.0 180 46.7
Gohir.D03G009800 Gossypium hirsutum HOM05D007514 ORTHO05D009469 4.5e-30 135.2 169 46.7
Prupe.7G167500 Prunus persica HOM05D007514 ORTHO05D009469 5.8e-30 134.8 123 59.3
TWI09G1362 Tripterygium wilfordii HOM05D007514 ORTHO05D009469 5.8e-30 134.8 161 50.3
Oeu059507.1 Olea europaea HOM05D007514 ORTHO05D009469 7.6e-30 134.4 129 52.7
unitig_26.g10012 Utricularia gibba HOM05D007514 ORTHO05D009469 7.6e-30 134.4 101 67.3
Gorai.003G010100 Gossypium raimondii HOM05D007514 ORTHO05D009469 1.7e-29 133.3 172 45.9
SGA_v2.0_scaffold234G43648 Striga asiatica HOM05D007514 ORTHO05D009469 1.7e-29 133.3 136 54.4
MD02G1133200 Malus domestica HOM05D007514 ORTHO05D009469 2.2e-29 132.9 118 61.0
DCAR_016611 Daucus carota HOM05D007514 ORTHO05D009469 6.4e-29 131.3 148 51.4
Nn6g32368 Nelumbo nucifera HOM05D007514 ORTHO05D009469 6.4e-29 131.3 106 61.3
Ciclev10026620m.g Citrus clementina HOM05D007514 ORTHO05D009469 8.4e-29 131.0 166 45.8
Cc07_g10640 Coffea canephora HOM05D007514 ORTHO05D009469 1.1e-28 130.6 108 62.0
COL.COLO4_21918 Corchorus olitorius HOM05D007514 ORTHO05D009469 1.4e-28 130.2 155 49.7
MBI05_g15346_MAGBIO Magnolia biondii HOM05D007514 ORTHO05D009469 1.9e-28 129.8 102 59.8
Phvul.003G262200 Phaseolus vulgaris HOM05D007514 ORTHO05D009469 2.4e-28 129.4 106 61.3
QL06p032616 Quercus lobata HOM05D007514 ORTHO05D009469 3.2e-28 129.0 106 61.3
PGSC0003DMG401003636 Solanum tuberosum HOM05D007514 ORTHO05D009469 5.4e-28 128.3 125 56.0
Lalb_Chr05g0229901 Lupinus albus HOM05D007514 ORTHO05D009469 2.1e-27 126.3 92 65.2
PSO675G8043 Papaver somniferum HOM05D007514 ORTHO05D009469 2.1e-27 126.3 140 50.7
Glyma.02G048800 Glycine max HOM05D007514 ORTHO05D009469 2.7e-27 125.9 100 62.0
Glyma.16G128900 Glycine max HOM05D007514 ORTHO05D009469 2.7e-27 125.9 109 58.7
PGR119G2084 Punica granatum HOM05D007514 ORTHO05D009469 3.5e-27 125.6 127 56.7
PSO541G1849 Papaver somniferum HOM05D007514 ORTHO05D009469 4.6e-27 125.2 104 59.6
EL10Ac9g21968 Beta vulgaris HOM05D007514 ORTHO05D009469 6.0e-27 124.8 71 74.6
Lj2P467T19 Lonicera japonica HOM05D007514 ORTHO05D009469 6.0e-27 124.8 92 67.4
Rhsim08G0034000 Rhododendron simsii HOM05D007514 ORTHO05D009469 6.0e-27 124.8 101 60.4
Ca_22373_v3 Cicer arietinum L. HOM05D007514 ORTHO05D009469 7.9e-27 124.4 127 52.0
TAR365G1204 Trochodendron aralioides HOM05D007514 ORTHO05D009469 1.3e-26 123.6 118 55.9
CANSAT01G2848 Cannabis sativa HOM05D007514 ORTHO05D009469 2.3e-26 122.9 93 66.7
Dinv33625 Davidia involucrata HOM05D007514 ORTHO05D009469 3.0e-26 122.5 106 60.4
TAR365G0263 Trochodendron aralioides HOM05D007514 ORTHO05D009469 3.9e-26 122.1 118 55.1
arahy.Tifrunner.gnm1.ann1.JXSY0Y Arachis hypogaea HOM05D007514 ORTHO05D009469 5.1e-26 121.7 77 71.4
MELO3C007896.2 Cucumis melo HOM05D007514 ORTHO05D009469 6.7e-26 121.3 93 63.4
arahy.Tifrunner.gnm1.ann1.EYR4CZ Arachis hypogaea HOM05D007514 ORTHO05D009469 1.1e-25 120.6 164 45.1
Peaxi162Scf00083g00065 Petunia axillaris HOM05D007514 ORTHO05D009469 1.5e-25 120.2 80 70.0
ClCG01G020240 Citrullus lanatus HOM05D007514 ORTHO05D009469 1.9e-25 119.8 94 61.7
Sopen02g028770 Solanum pennellii HOM05D007514 ORTHO05D009469 2.5e-25 119.4 81 70.4
FvH4_1g11940 Fragaria vesca HOM05D007514 ORTHO05D009469 3.3e-25 119.0 76 72.4
FAN19G0235 Fragaria x ananassa HOM05D007514 ORTHO05D009469 3.3e-25 119.0 76 72.4
FAN26G2491 Fragaria x ananassa HOM05D007514 ORTHO05D009469 3.3e-25 119.0 76 72.4
CiPaw.07G058000 Carya illinoinensis HOM05D007514 ORTHO05D009469 4.3e-25 118.6 167 43.7
CsaV3_6G047030 Cucumis sativus L. HOM05D007514 ORTHO05D009469 5.6e-25 118.2 176 39.8
FAN23G2896 Fragaria x ananassa HOM05D007514 ORTHO05D009469 5.6e-25 118.2 71 76.1
Atru.chr3.793 Acer truncatum HOM05D007514 ORTHO05D009469 7.4e-25 117.9 71 74.6
Cfa006967 Carpinus fangiana HOM05D007514 ORTHO05D009469 7.4e-25 117.9 69 75.4
Haze_03771 Corylus avellana HOM05D007514 ORTHO05D009469 7.4e-25 117.9 69 75.4
Lj4g0013490 Lotus japonicus HOM05D007514 ORTHO05D009469 9.6e-25 117.5 78 69.2
Psat4g099040 Pisum sativum HOM05D007514 ORTHO05D009469 9.6e-25 117.5 92 60.9
Nitab4.5_0006286g0070 Nicotiana tabacum HOM05D007514 ORTHO05D009469 1.6e-24 116.7 76 73.7
Pp3c15_14110 Physcomitrium patens HOM05D007514 ORTHO05D009469 3.7e-24 115.5 130 45.4
Nitab4.5_0001959g0010 Nicotiana tabacum HOM05D007514 ORTHO05D009469 6.2e-24 114.8 133 51.1
Os06g0715200 Oryza sativa ssp. japonica HOM05D007514 ORTHO05D009469 6.2e-24 114.8 76 67.1
TPR.G30050 Trifolium pratense HOM05D007514 ORTHO05D009469 6.2e-24 114.8 111 55.9
Zm00001eb228020 Zea mays HOM05D007514 ORTHO05D009469 6.2e-24 114.8 75 66.7
Medtr8g075960 Medicago truncatula HOM05D007514 ORTHO05D009469 1.4e-23 113.6 92 63.0
Sed0026037 Sechium edule HOM05D007514 ORTHO05D009469 1.4e-23 113.6 133 47.4
Duzib147G0981 Durio zibethinus HOM05D007514 ORTHO05D009469 5.3e-23 111.7 157 43.3
SMO353G0320 Selaginella moellendorffii HOM05D007514 ORTHO05D009469 4.5e-22 108.6 105 50.5
HPP92_025365 Vanilla planifolia HOM05D007514 ORTHO05D009469 9.9e-22 107.5 100 57.0
arahy.Tifrunner.gnm1.ann1.KXHU4R Arachis hypogaea HOM05D007514 ORTHO05D009469 1.3e-21 107.1 145 43.4
FAN28G1094 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.3e-21 107.1 96 59.4
AagrBONN_evm.TU.Sc2ySwM_344.4071 Anthoceros agrestis HOM05D007514 ORTHO05D009469 2.9e-21 105.9 117 48.7
Mapoly0011s0103 Marchantia polymorpha HOM05D007514 ORTHO05D009469 2.7e-19 99.4 69 63.8
SEGI_16775 Sequoiadendron giganteum HOM05D007514 ORTHO05D009469 2.3e-18 96.3 58 72.4
CAN.G66.6 Capsicum annuum HOM05D007514 ORTHO05D009469 2.5e-17 92.8 80 58.8
Cre05.g245102 Chlamydomonas reinhardtii HOM05D007514 ORTHO05D009469 1.7e-13 80.1 54 61.1


User provided reference genes

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