Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G49910 Arabidopsis lyrata HOM05D000192 ORTHO05D000123 6.6e-42 173.7 93 100.0
BcaB08g34690 Brassica carinata HOM05D000192 ORTHO05D000123 4.4e-22 107.8 75 74.7
Carub.0003s3100 Capsella rubella HOM05D000192 ORTHO05D000123 1.3e-21 106.3 75 76.0
A03p46250 Brassica napus HOM05D000192 ORTHO05D000123 4.9e-21 104.4 75 73.3
BcaC01g02962 Brassica carinata HOM05D000192 ORTHO05D000123 8.4e-21 103.6 75 73.3
C03p57870 Brassica napus HOM05D000192 ORTHO05D000123 8.4e-21 103.6 75 73.3
BolC3t18059H Brassica oleracea HOM05D000192 ORTHO05D000123 8.4e-21 103.6 75 73.3
BraA03t13749Z Brassica rapa HOM05D000192 ORTHO05D000123 1.1e-20 103.2 75 72.0
AL3G49890 Arabidopsis lyrata HOM05D000192 ORTHO05D000123 2.4e-20 102.1 75 72.0
Sp3g30370 Schrenkiella parvula HOM05D000192 ORTHO05D000123 2.4e-20 102.1 74 71.6
CARHR293360 Cardamine hirsuta HOM05D000192 ORTHO05D000123 5.4e-20 100.9 75 73.3
Carub.0003s3099 Capsella rubella HOM05D000192 ORTHO05D000123 4.6e-19 97.8 75 69.3
BolC7t41063H Brassica oleracea HOM05D000192 ORTHO05D000123 1.0e-18 96.7 75 66.7
A07p04030 Brassica napus HOM05D000192 ORTHO05D000123 1.7e-18 95.9 75 65.3
BraA07t28194Z Brassica rapa HOM05D000192 ORTHO05D000123 1.7e-18 95.9 75 65.3
BcaB03g16447 Brassica carinata HOM05D000192 ORTHO05D000123 1.5e-17 92.8 75 65.3
Thhalv10023198m.g Eutrema salsugineum HOM05D000192 ORTHO05D000123 1.5e-17 92.8 73 68.5
CARHR107390 Cardamine hirsuta HOM05D000192 ORTHO05D000123 1.9e-17 92.4 87 60.9
BcaC06g36219 Brassica carinata HOM05D000192 ORTHO05D000123 2.5e-17 92.0 75 62.7
C07p06420 Brassica napus HOM05D000192 ORTHO05D000123 2.5e-17 92.0 75 62.7
Aa31LG8G14290 Aethionema arabicum HOM05D000192 ORTHO05D000123 2.1e-16 89.0 75 65.3
CARHR293380 Cardamine hirsuta HOM05D000192 ORTHO05D000123 4.7e-16 87.8 75 65.3
Aa31LG8G14370 Aethionema arabicum HOM05D000192 ORTHO05D000123 1.4e-15 86.3 75 64.0
AL3G49920 Arabidopsis lyrata HOM05D000192 ORTHO05D000123 2.4e-15 85.5 74 62.2
BcaB03g11780 Brassica carinata HOM05D000192 ORTHO05D000123 3.1e-15 85.1 75 58.7
CARHR293370 Cardamine hirsuta HOM05D000192 ORTHO05D000123 4.0e-15 84.7 74 63.5
Aa31LG2G14690 Aethionema arabicum HOM05D000192 ORTHO05D000123 6.8e-15 84.0 90 56.7
Aa31LG8G14390 Aethionema arabicum HOM05D000192 ORTHO05D000123 6.8e-15 84.0 75 66.7
Aa31sc739G40 Aethionema arabicum HOM05D000192 ORTHO05D000123 6.8e-15 84.0 88 58.0
Carub.0003s3102 Capsella rubella HOM05D000192 ORTHO05D000123 6.8e-15 84.0 74 60.8
Thhalv10027348m.g Eutrema salsugineum HOM05D000192 ORTHO05D000123 6.8e-15 84.0 75 62.7
Aa31LG8G14360 Aethionema arabicum HOM05D000192 ORTHO05D000123 8.9e-15 83.6 75 66.7
AT2G17070 Arabidopsis thaliana HOM05D000192 ORTHO05D000123 1.2e-14 83.2 74 60.8
Aa31sc1096G10 Aethionema arabicum HOM05D000192 ORTHO05D000123 1.5e-14 82.8 76 68.4
AT2G17080 Arabidopsis thaliana HOM05D000192 ORTHO05D000123 1.5e-14 82.8 75 58.7
Carub.0003s3101 Capsella rubella HOM05D000192 ORTHO05D000123 2.0e-14 82.4 74 58.1
Sp7g32960 Schrenkiella parvula HOM05D000192 ORTHO05D000123 4.4e-14 81.3 90 53.3
A03p63460 Brassica napus HOM05D000192 ORTHO05D000123 2.2e-13 79.0 75 57.3
BcaC01g00834 Brassica carinata HOM05D000192 ORTHO05D000123 2.9e-13 78.6 75 54.7
BolC3t20789H Brassica oleracea HOM05D000192 ORTHO05D000123 2.9e-13 78.6 75 54.7
AT4G35200 Arabidopsis thaliana HOM05D000192 ORTHO05D000123 3.8e-13 78.2 75 57.3
Thhalv10027560m.g Eutrema salsugineum HOM05D000192 ORTHO05D000123 3.8e-13 78.2 75 57.3
BcaC01g02952 Brassica carinata HOM05D000192 ORTHO05D000123 4.9e-13 77.8 75 57.3
BolC3t18068H Brassica oleracea HOM05D000192 ORTHO05D000123 4.9e-13 77.8 75 57.3
Aa31LG8G14330 Aethionema arabicum HOM05D000192 ORTHO05D000123 6.4e-13 77.4 76 64.5
BcaNung04608 Brassica carinata HOM05D000192 ORTHO05D000123 6.4e-13 77.4 75 57.3
Aa31LG8G14350 Aethionema arabicum HOM05D000192 ORTHO05D000123 8.4e-13 77.0 76 64.5
C03p84970 Brassica napus HOM05D000192 ORTHO05D000123 8.4e-13 77.0 75 53.3
Thhalv10026047m.g Eutrema salsugineum HOM05D000192 ORTHO05D000123 8.4e-13 77.0 76 57.9
C03p57950 Brassica napus HOM05D000192 ORTHO05D000123 1.1e-12 76.6 74 58.1
BcaB08g34694 Brassica carinata HOM05D000192 ORTHO05D000123 1.4e-12 76.3 75 57.3
A08p16290 Brassica napus HOM05D000192 ORTHO05D000123 1.4e-12 76.3 75 52.0
BraA08t33599Z Brassica rapa HOM05D000192 ORTHO05D000123 1.4e-12 76.3 75 52.0
Sp7g32970 Schrenkiella parvula HOM05D000192 ORTHO05D000123 1.4e-12 76.3 68 63.2
AL3G49930 Arabidopsis lyrata HOM05D000192 ORTHO05D000123 1.9e-12 75.9 75 57.3
Carub.0007s0519 Capsella rubella HOM05D000192 ORTHO05D000123 1.9e-12 75.9 72 59.7
Aa31LG8G14310 Aethionema arabicum HOM05D000192 ORTHO05D000123 2.4e-12 75.5 76 61.8
Aa31sc1096G40 Aethionema arabicum HOM05D000192 ORTHO05D000123 2.4e-12 75.5 76 61.8
BcaNung02383 Brassica carinata HOM05D000192 ORTHO05D000123 2.4e-12 75.5 75 54.7
C07p61040 Brassica napus HOM05D000192 ORTHO05D000123 2.4e-12 75.5 75 54.7
BolC7t46529H Brassica oleracea HOM05D000192 ORTHO05D000123 2.4e-12 75.5 75 54.7
Thhalv10022962m.g Eutrema salsugineum HOM05D000192 ORTHO05D000123 3.2e-12 75.1 75 57.3
Sp7g32980 Schrenkiella parvula HOM05D000192 ORTHO05D000123 4.2e-12 74.7 75 56.0
Aa31LG8G14320 Aethionema arabicum HOM05D000192 ORTHO05D000123 5.4e-12 74.3 76 61.8
BolC7t41065H Brassica oleracea HOM05D000192 ORTHO05D000123 5.4e-12 74.3 75 61.3
Carub.0007s0518 Capsella rubella HOM05D000192 ORTHO05D000123 7.1e-12 73.9 76 53.9
Sp3g30360 Schrenkiella parvula HOM05D000192 ORTHO05D000123 7.1e-12 73.9 75 57.3
Aa31LG2G14630 Aethionema arabicum HOM05D000192 ORTHO05D000123 9.3e-12 73.6 54 72.2
BcaC01g00833 Brassica carinata HOM05D000192 ORTHO05D000123 9.3e-12 73.6 70 60.0
C03p84960 Brassica napus HOM05D000192 ORTHO05D000123 9.3e-12 73.6 70 60.0
BolC3t20788H Brassica oleracea HOM05D000192 ORTHO05D000123 9.3e-12 73.6 70 60.0
CARHR243410 Cardamine hirsuta HOM05D000192 ORTHO05D000123 2.7e-11 72.0 76 52.6
CARHR243430 Cardamine hirsuta HOM05D000192 ORTHO05D000123 2.7e-11 72.0 75 57.3
BraA03t15417Z Brassica rapa HOM05D000192 ORTHO05D000123 3.5e-11 71.6 83 51.8
Carub.0007s0510 Capsella rubella HOM05D000192 ORTHO05D000123 3.5e-11 71.6 75 53.3
A07p04040 Brassica napus HOM05D000192 ORTHO05D000123 7.8e-11 70.5 75 58.7
BraA07t28195Z Brassica rapa HOM05D000192 ORTHO05D000123 7.8e-11 70.5 75 58.7
A08p16280 Brassica napus HOM05D000192 ORTHO05D000123 1.0e-10 70.1 70 57.1
BraA08t33598Z Brassica rapa HOM05D000192 ORTHO05D000123 1.0e-10 70.1 70 57.1
AT4G35210 Arabidopsis thaliana HOM05D000192 ORTHO05D000123 1.3e-10 69.7 75 53.3
BcaC06g36218 Brassica carinata HOM05D000192 ORTHO05D000123 1.7e-10 69.3 77 59.7
C07p06430 Brassica napus HOM05D000192 ORTHO05D000123 1.7e-10 69.3 77 59.7
BcaNung04607 Brassica carinata HOM05D000192 ORTHO05D000123 2.3e-10 68.9 75 56.0
Sp3g30390 Schrenkiella parvula HOM05D000192 ORTHO05D000123 2.3e-10 68.9 75 50.7
BcaB03g11779 Brassica carinata HOM05D000192 ORTHO05D000123 3.0e-10 68.6 75 53.3
BcaB03g16446 Brassica carinata HOM05D000192 ORTHO05D000123 5.1e-10 67.8 75 56.0
C07p61050 Brassica napus HOM05D000192 ORTHO05D000123 5.1e-10 67.8 63 61.9
BolC7t46530H Brassica oleracea HOM05D000192 ORTHO05D000123 5.1e-10 67.8 63 61.9
Thhalv10022833m.g Eutrema salsugineum HOM05D000192 ORTHO05D000123 8.7e-10 67.0 74 54.1
BcaC01g02961 Brassica carinata HOM05D000192 ORTHO05D000123 1.9e-09 65.9 72 52.8
C03p57880 Brassica napus HOM05D000192 ORTHO05D000123 1.9e-09 65.9 72 52.8
BolC3t18060H Brassica oleracea HOM05D000192 ORTHO05D000123 1.9e-09 65.9 72 52.8
BcaB08g34691 Brassica carinata HOM05D000192 ORTHO05D000123 2.5e-09 65.5 71 52.1
Thhalv10023068m.g Eutrema salsugineum HOM05D000192 ORTHO05D000123 2.5e-09 65.5 75 56.0
A03p46260 Brassica napus HOM05D000192 ORTHO05D000123 4.3e-09 64.7 72 52.8
BraA03t13750Z Brassica rapa HOM05D000192 ORTHO05D000123 4.3e-09 64.7 72 52.8
THA.LOC104819674 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 9.6e-09 63.5 77 55.8
Aa31LG2G14640 Aethionema arabicum HOM05D000192 ORTHO05D000123 1.6e-08 62.8 54 59.3
THA.LOC104819673 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 1.6e-08 62.8 69 53.6
THA.LOC104819667 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 6.2e-08 60.8 77 53.2
THA.LOC104819670 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 6.2e-08 60.8 69 52.2
THA.LOC104819668 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 1.8e-07 59.3 69 50.7
THA.LOC104819669 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 1.8e-07 59.3 77 51.9
THA.LOC104819678 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 6.9e-07 57.4 79 51.9
Aa31LG2G14610 Aethionema arabicum HOM05D000192 ORTHO05D000123 9.0e-07 57.0 64 53.1
THA.LOC104819671 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 2.0e-06 55.8 77 49.4
THA.LOC104819672 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 2.0e-06 55.8 77 49.4
THA.LOC104819677 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 7.6e-06 53.9 79 48.1
Aa31LG2G14720 Aethionema arabicum HOM05D000192 ORTHO05D000123 9.9e-06 53.5 62 53.2
THA.LOC104807388 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 9.9e-06 53.5 82 41.5
THA.LOC109116890 Tarenaya hassleriana HOM05D000192 ORTHO05D000123 9.9e-06 53.5 69 47.8


User provided reference genes

Program Settings