Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G49550 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 7.3e-46 186.8 90 100.0
AL3G47620 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.3e-23 112.1 89 64.0
Carub.0003s3063 Capsella rubella HOM05D000171 ORTHO05D000101 4.7e-21 104.4 88 59.1
CARHR182090 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.8e-20 102.4 87 64.4
AL4G31270 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.7e-18 95.9 89 53.9
Sp1g05850 Schrenkiella parvula HOM05D000171 ORTHO05D000101 1.1e-17 93.2 85 54.1
Carub.0003s3064 Capsella rubella HOM05D000171 ORTHO05D000101 1.9e-17 92.4 88 54.5
BcaC04g19915 Brassica carinata HOM05D000171 ORTHO05D000101 9.2e-17 90.1 86 55.8
AL1G54860 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.2e-16 89.7 86 55.8
BcaC04g20172 Brassica carinata HOM05D000171 ORTHO05D000101 1.2e-16 89.7 86 55.8
C09p47030 Brassica napus HOM05D000171 ORTHO05D000101 1.2e-16 89.7 86 55.8
BraA10t43382Z Brassica rapa HOM05D000171 ORTHO05D000101 1.2e-16 89.7 86 55.8
BraA08t32678Z Brassica rapa HOM05D000171 ORTHO05D000101 2.1e-16 89.0 90 53.3
Thhalv10011525m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.6e-16 87.8 86 52.3
Thhalv10012025m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.6e-16 87.8 86 52.3
BcaC01g05368 Brassica carinata HOM05D000171 ORTHO05D000101 7.8e-16 87.0 86 48.8
C03p27380 Brassica napus HOM05D000171 ORTHO05D000101 7.8e-16 87.0 86 48.8
BolC3t15119H Brassica oleracea HOM05D000171 ORTHO05D000101 7.8e-16 87.0 86 48.8
Sp1g09440 Schrenkiella parvula HOM05D000171 ORTHO05D000101 7.8e-16 87.0 85 52.9
BcaC08g43649 Brassica carinata HOM05D000171 ORTHO05D000101 1.0e-15 86.7 90 52.2
C06p10670 Brassica napus HOM05D000171 ORTHO05D000101 1.0e-15 86.7 90 52.2
BolC6t36149H Brassica oleracea HOM05D000171 ORTHO05D000101 1.0e-15 86.7 90 52.2
AL8G39600 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.3e-15 86.3 89 55.1
Carub.0001s4456 Capsella rubella HOM05D000171 ORTHO05D000101 1.3e-15 86.3 89 53.9
BcaB01g03501 Brassica carinata HOM05D000171 ORTHO05D000101 2.3e-15 85.5 86 47.7
Carub.0005s0876 Capsella rubella HOM05D000171 ORTHO05D000101 2.3e-15 85.5 89 49.4
C02p31520 Brassica napus HOM05D000171 ORTHO05D000101 3.0e-15 85.1 85 54.1
BraA02t06939Z Brassica rapa HOM05D000171 ORTHO05D000101 3.0e-15 85.1 85 54.1
BcaC03g15472 Brassica carinata HOM05D000171 ORTHO05D000101 3.9e-15 84.7 85 54.1
A03p23050 Brassica napus HOM05D000171 ORTHO05D000101 3.9e-15 84.7 86 47.7
BraA03t11528Z Brassica rapa HOM05D000171 ORTHO05D000101 3.9e-15 84.7 86 47.7
Thhalv10005397m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 3.9e-15 84.7 85 51.8
AT5G62660 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 5.1e-15 84.3 89 52.8
A02p18970 Brassica napus HOM05D000171 ORTHO05D000101 6.6e-15 84.0 85 54.1
BraA06t23214Z Brassica rapa HOM05D000171 ORTHO05D000101 8.7e-15 83.6 88 52.3
BolC2t12282H Brassica oleracea HOM05D000171 ORTHO05D000101 1.1e-14 83.2 89 51.7
C02p62250 Brassica napus HOM05D004904 ORTHO05D000101 1.9e-14 82.4 88 51.1
BcaB01g03500 Brassica carinata HOM05D000171 ORTHO05D000101 2.5e-14 82.0 86 47.7
BcaB06g26495 Brassica carinata HOM05D000171 ORTHO05D000101 3.3e-14 81.6 88 47.7
Carub.0004s2322 Capsella rubella HOM05D000171 ORTHO05D000101 3.3e-14 81.6 89 47.2
BolC3t15121H Brassica oleracea HOM05D000171 ORTHO05D000101 5.6e-14 80.9 86 45.3
C03p27440 Brassica napus HOM05D000171 ORTHO05D000101 7.3e-14 80.5 86 45.3
AL4G38860 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.2e-13 79.7 87 44.8
C03p27370 Brassica napus HOM05D000171 ORTHO05D000101 1.2e-13 79.7 88 46.6
BolC3t15117H Brassica oleracea HOM05D000171 ORTHO05D000101 1.2e-13 79.7 88 46.6
Carub.0008s2334 Capsella rubella HOM05D000171 ORTHO05D000101 2.1e-13 79.0 88 53.4
AL4G38850 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.8e-13 78.6 89 49.4
AT2G40920 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 2.8e-13 78.6 87 43.7
A02p18980 Brassica napus HOM05D000171 ORTHO05D000101 3.6e-13 78.2 85 51.8
Carub.0008s2338 Capsella rubella HOM05D000171 ORTHO05D000101 4.7e-13 77.8 85 54.1
CARHR276200 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.2e-13 77.4 88 50.0
Sp4g23370 Schrenkiella parvula HOM05D000171 ORTHO05D000101 8.1e-13 77.0 86 43.0
Carub.0008s2318 Capsella rubella HOM05D000171 ORTHO05D000101 1.4e-12 76.3 89 47.2
Thhalv10008003m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.8e-12 75.9 74 52.7
BcaB01g03499 Brassica carinata HOM05D000171 ORTHO05D000101 2.4e-12 75.5 86 43.0
CARHR276430 Cardamine hirsuta HOM05D000171 ORTHO05D000101 2.4e-12 75.5 88 50.0
Carub.0004s2438 Capsella rubella HOM05D000171 ORTHO05D000101 3.1e-12 75.1 87 49.4
Thhalv10016561m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 5.3e-12 74.3 90 42.2
AT2G40910 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 9.0e-12 73.6 89 47.2
A08p00330 Brassica napus HOM05D000171 ORTHO05D000101 1.2e-11 73.2 85 42.4
Thhalv10005275m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.2e-11 73.2 84 51.2
CARHR276420 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.5e-11 72.8 88 50.0
AL7G33990 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.0e-11 72.4 85 48.2
AL8G39400 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.0e-11 72.4 89 47.2
AT5G62510 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 4.4e-11 71.2 89 46.1
Carub.0008s2317 Capsella rubella HOM05D000171 ORTHO05D000101 4.4e-11 71.2 87 47.1
Thhalv10028181m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.4e-11 71.2 88 47.7
Thhalv10004411m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 7.6e-11 70.5 89 46.1
BcaC01g01564 Brassica carinata HOM05D000171 ORTHO05D000101 9.9e-11 70.1 85 45.9
BolC3t21616H Brassica oleracea HOM05D000171 ORTHO05D000101 9.9e-11 70.1 85 45.9
BraA08t32091Z Brassica rapa HOM05D000171 ORTHO05D000101 9.9e-11 70.1 85 41.2
AL8G39540 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.3e-10 69.7 85 49.4
AL8G39570 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.3e-10 69.7 85 49.4
C03p93170 Brassica napus HOM05D000171 ORTHO05D000101 1.3e-10 69.7 85 44.7
BolC7t45552H Brassica oleracea HOM05D000171 ORTHO05D000101 1.3e-10 69.7 90 42.2
Thhalv10005666m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.7e-10 69.3 88 47.7
BcaB03g11646 Brassica carinata HOM05D000171 ORTHO05D000101 2.2e-10 68.9 89 43.8
C06p10710 Brassica napus HOM05D000171 ORTHO05D000101 2.9e-10 68.6 76 50.0
BolC6t36157H Brassica oleracea HOM05D000171 ORTHO05D000101 2.9e-10 68.6 76 50.0
Carub.0008s2333 Capsella rubella HOM05D000171 ORTHO05D000101 3.8e-10 68.2 88 50.0
BcaC01g05366 Brassica carinata HOM05D000171 ORTHO05D000101 4.9e-10 67.8 51 54.9
BcaC07g38624 Brassica carinata HOM05D000171 ORTHO05D000101 4.9e-10 67.8 86 41.9
BcaNung02552 Brassica carinata HOM05D000171 ORTHO05D000101 6.4e-10 67.4 90 41.1
CARHR210940 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.4e-10 67.4 85 45.9
AT1G55947 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 8.4e-10 67.0 90 46.7
AT4G19940 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 8.4e-10 67.0 89 42.7
AL4G38870 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.1e-09 66.6 87 43.7
AL8G39590 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 1.1e-09 66.6 82 48.8
BcaB03g11650 Brassica carinata HOM05D000171 ORTHO05D000101 1.1e-09 66.6 89 43.8
CARHR136020 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.4e-09 66.2 87 43.7
BcaB03g13266 Brassica carinata HOM05D000171 ORTHO05D000101 2.4e-09 65.5 86 41.9
BcaB04g16928 Brassica carinata HOM05D000171 ORTHO05D000101 2.4e-09 65.5 82 45.1
BcaB03g13267 Brassica carinata HOM05D000171 ORTHO05D000101 3.2e-09 65.1 85 42.4
BcaC02g07628 Brassica carinata HOM05D000171 ORTHO05D000101 3.2e-09 65.1 85 38.8
BcaNung02553 Brassica carinata HOM05D000171 ORTHO05D000101 3.2e-09 65.1 88 42.0
BolC4t27998H Brassica oleracea HOM05D000748 ORTHO05D000101 3.2e-09 65.1 85 38.8
BcaC07g40029 Brassica carinata HOM05D000171 ORTHO05D000101 4.2e-09 64.7 81 43.2
C08p14200 Brassica napus HOM05D000171 ORTHO05D000101 4.2e-09 64.7 85 43.5
BcaC07g38647 Brassica carinata HOM05D000171 ORTHO05D000101 5.4e-09 64.3 85 43.5
BcaNung03037 Brassica carinata HOM05D000171 ORTHO05D000101 5.4e-09 64.3 83 41.0
BolC8t49058H Brassica oleracea HOM05D000171 ORTHO05D000101 5.4e-09 64.3 85 43.5
BraA08t35273Z Brassica rapa HOM05D000171 ORTHO05D000101 5.4e-09 64.3 85 43.5
AT3G52510 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 7.1e-09 63.9 86 43.0
AT2G40925 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 9.3e-09 63.5 86 44.2
A08p33570 Brassica napus HOM05D000171 ORTHO05D000101 1.2e-08 63.2 85 43.5
BolC7t45551H Brassica oleracea HOM05D000171 ORTHO05D000101 1.2e-08 63.2 88 38.6
Carub.0007s2126 Capsella rubella HOM05D000171 ORTHO05D000101 1.2e-08 63.2 85 42.4
CARHR226260 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.6e-08 62.8 83 43.4
CARHR226700 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.6e-08 62.8 83 43.4
Carub.0008s2336 Capsella rubella HOM05D000171 ORTHO05D000101 2.1e-08 62.4 81 45.7
AL7G44280 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.7e-08 62.0 85 44.7
A09p45340 Brassica napus HOM05D000171 ORTHO05D000101 2.7e-08 62.0 91 39.6
BraA09t39998Z Brassica rapa HOM05D000171 ORTHO05D000101 2.7e-08 62.0 91 39.6
AL5G33220 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.5e-08 61.6 83 41.0
BcaB04g21422 Brassica carinata HOM05D000635 ORTHO05D000101 3.5e-08 61.6 81 40.7
BraA09t39997Z Brassica rapa HOM05D000171 ORTHO05D000101 3.5e-08 61.6 91 39.6
BolC8t49012H Brassica oleracea HOM05D000171 ORTHO05D000101 6.0e-08 60.8 85 41.2
CARHR276410 Cardamine hirsuta HOM05D000171 ORTHO05D000101 6.0e-08 60.8 85 44.7
Carub.0007s2125 Capsella rubella HOM05D000171 ORTHO05D000101 7.8e-08 60.5 85 41.2
CARHR162140 Cardamine hirsuta HOM05D000171 ORTHO05D000101 1.0e-07 60.1 78 44.9
Thhalv10025237m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.0e-07 60.1 89 42.7
AT2G16810 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 1.3e-07 59.7 35 88.6
A02p19000 Brassica napus HOM05D000171 ORTHO05D000101 1.3e-07 59.7 62 50.0
BraA02t06948Z Brassica rapa HOM05D000171 ORTHO05D000101 1.3e-07 59.7 62 50.0
Carub.0007s2124 Capsella rubella HOM05D000171 ORTHO05D000101 1.3e-07 59.7 85 38.8
AL5G33030 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 2.3e-07 58.9 82 41.5
BcaB01g00383 Brassica carinata HOM05D000171 ORTHO05D000101 3.0e-07 58.5 91 37.4
BcaB03g11651 Brassica carinata HOM05D000171 ORTHO05D000101 3.0e-07 58.5 84 41.7
AL7G45230 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 3.9e-07 58.2 79 36.7
AT4G19930 Arabidopsis thaliana HOM05D000171 ORTHO05D000101 3.9e-07 58.2 85 42.4
BolC7t45568H Brassica oleracea HOM05D000171 ORTHO05D000101 3.9e-07 58.2 89 37.1
BolC9t53915H Brassica oleracea HOM05D000171 ORTHO05D000101 3.9e-07 58.2 83 39.8
AL3G37620 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 5.1e-07 57.8 81 40.7
BcaC01g00644 Brassica carinata HOM05D000171 ORTHO05D000101 5.1e-07 57.8 84 42.9
BolC3t20543H Brassica oleracea HOM05D000171 ORTHO05D000101 5.1e-07 57.8 84 42.9
AL5G33270 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 6.6e-07 57.4 79 38.0
BcaC04g23284 Brassica carinata HOM05D000171 ORTHO05D000101 6.6e-07 57.4 83 39.8
BcaC08g43653 Brassica carinata HOM05D015596 ORTHO05D000101 6.6e-07 57.4 60 50.0
C09p10160 Brassica napus HOM05D000171 ORTHO05D000101 6.6e-07 57.4 83 39.8
BolC2t09183H Brassica oleracea HOM05D000171 ORTHO05D000101 6.6e-07 57.4 62 48.4
Carub.0005s1873 Capsella rubella HOM05D000171 ORTHO05D000101 6.6e-07 57.4 77 40.3
BcaB01g00375 Brassica carinata HOM05D000171 ORTHO05D000101 1.1e-06 56.6 86 38.4
Carub.0003s1002 Capsella rubella HOM05D000171 ORTHO05D000101 1.1e-06 56.6 75 40.0
BcaC07g40028 Brassica carinata HOM05D000171 ORTHO05D000101 1.5e-06 56.2 77 40.3
BcaB01g00382 Brassica carinata HOM05D000171 ORTHO05D000101 1.9e-06 55.8 91 36.3
C07p46920 Brassica napus HOM05D000171 ORTHO05D000101 1.9e-06 55.8 79 35.4
BolC7t45208H Brassica oleracea HOM05D000171 ORTHO05D000101 1.9e-06 55.8 79 35.4
Carub.0005s1893 Capsella rubella HOM05D000171 ORTHO05D000101 1.9e-06 55.8 88 33.0
Thhalv10000202m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.9e-06 55.8 76 44.7
BraA04t17669Z Brassica rapa HOM05D000171 ORTHO05D000101 2.5e-06 55.5 100 39.0
AL5G32950 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.3e-06 54.7 86 41.9
A03p48830 Brassica napus HOM05D000171 ORTHO05D000101 4.3e-06 54.7 86 33.7
BraA03t13983Z Brassica rapa HOM05D000171 ORTHO05D000101 4.3e-06 54.7 86 33.7
Carub.0003s2329 Capsella rubella HOM05D000171 ORTHO05D000101 5.6e-06 54.3 88 38.6
CARHR264750 Cardamine hirsuta HOM05D000171 ORTHO05D000101 7.3e-06 53.9 49 53.1


User provided reference genes

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