Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G48400 Arabidopsis lyrata HOM05D005710 ORTHO05D004657 4.8e-45 184.1 91 100.0
Thhalv10027716m.g Eutrema salsugineum HOM05D005710 ORTHO05D004657 7.6e-19 97.1 85 64.7
BcaC08g44413 Brassica carinata HOM05D005710 ORTHO05D004657 1.9e-14 82.4 76 56.6
C06p18500 Brassica napus HOM05D005710 ORTHO05D004657 1.9e-14 82.4 76 56.6
BolC6t37063H Brassica oleracea HOM05D005710 ORTHO05D004657 9.7e-14 80.1 76 55.3
THA.LOC104823892 Tarenaya hassleriana HOM05D005710 ORTHO05D004657 6.3e-13 77.4 85 48.2
BcaB02g07987 Brassica carinata HOM05D005710 ORTHO05D004657 1.1e-12 76.6 76 52.6
Aa31LG9G16660 Aethionema arabicum HOM05D005710 ORTHO05D004657 2.4e-12 75.5 57 63.2
THA.LOC104805502 Tarenaya hassleriana HOM05D005710 ORTHO05D004657 1.5e-11 72.8 83 49.4
BcaC06g33686 Brassica carinata HOM05D005710 ORTHO05D004657 3.4e-11 71.6 44 79.5
C07p38200 Brassica napus HOM05D005710 ORTHO05D004657 7.7e-11 70.5 44 77.3
Sp2g17910 Schrenkiella parvula HOM05D005710 ORTHO05D004657 1.0e-10 70.1 54 66.7
AL5G19350 Arabidopsis lyrata HOM05D005710 ORTHO05D004657 1.3e-10 69.7 56 64.3
AT3G29310 Arabidopsis thaliana HOM05D005710 ORTHO05D004657 1.3e-10 69.7 56 60.7
BcaB07g30084 Brassica carinata HOM05D005710 ORTHO05D004657 1.7e-10 69.3 46 69.6
CARHR154030 Cardamine hirsuta HOM05D005710 ORTHO05D004657 2.2e-10 68.9 50 70.0
Thhalv10003979m.g Eutrema salsugineum HOM05D005710 ORTHO05D004657 2.2e-10 68.9 64 62.5
Aa31LG2G3970 Aethionema arabicum HOM05D005710 ORTHO05D004657 8.5e-10 67.0 56 57.1
Carub.0005s0802 Capsella rubella HOM05D005710 ORTHO05D004657 1.1e-09 66.6 56 60.7
A06p39970 Brassica napus HOM05D005710 ORTHO05D004657 2.5e-09 65.5 50 64.0
BraA06t26912Z Brassica rapa HOM05D005710 ORTHO05D004657 2.5e-09 65.5 50 64.0
Thecc.04G091900 Theobroma cacao HOM05D005710 ORTHO05D004657 2.5e-09 65.5 55 61.8
A02p36530 Brassica napus HOM05D005710 ORTHO05D004657 3.2e-09 65.1 55 63.6
C02p55500 Brassica napus HOM05D005710 ORTHO05D004657 3.2e-09 65.1 40 77.5
BolC2t11608H Brassica oleracea HOM05D005710 ORTHO05D004657 3.2e-09 65.1 40 77.5
BraA02t08649Z Brassica rapa HOM05D005710 ORTHO05D004657 3.2e-09 65.1 55 63.6
QL02p039943 Quercus lobata HOM05D005710 ORTHO05D004657 4.2e-09 64.7 53 66.0
BcaC03g17571 Brassica carinata HOM05D005710 ORTHO05D004657 7.2e-09 63.9 40 72.5
Cfa007637 Carpinus fangiana HOM05D005710 ORTHO05D004657 2.1e-08 62.4 53 67.9
Duzib147G0411 Durio zibethinus HOM05D005710 ORTHO05D004657 2.7e-08 62.0 55 60.0
Potri.017G091100 Populus trichocarpa HOM05D005710 ORTHO05D004657 4.7e-08 61.2 55 58.2
Cpa.g.sc14.156 Carica papaya HOM05D005710 ORTHO05D004657 1.4e-07 59.7 53 60.4
Duzib187G0917 Durio zibethinus HOM05D005710 ORTHO05D004657 1.8e-07 59.3 55 60.0
Hma1.2p1_0481F.1_g161930 Hydrangea macrophylla HOM05D005710 ORTHO05D004657 1.8e-07 59.3 55 60.0
TWI34G1348 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 1.8e-07 59.3 65 55.4
Sabra17G0080200 Salix brachista HOM05D005710 ORTHO05D004657 2.3e-07 58.9 46 63.0
Gohir.D09G010000 Gossypium hirsutum HOM05D005710 ORTHO05D004657 3.0e-07 58.5 49 57.1
Gohir.A09G010900 Gossypium hirsutum HOM05D005710 ORTHO05D004657 5.1e-07 57.8 51 52.9
Actinidia07818 Actinidia chinensis HOM05D005710 ORTHO05D004657 8.8e-07 57.0 67 49.3
MD09G1062500 Malus domestica HOM05D005710 ORTHO05D004657 8.8e-07 57.0 61 55.7
PSO478G1813 Papaver somniferum HOM05D005710 ORTHO05D004657 8.8e-07 57.0 71 46.5
Aqoxy3G03578 Aquilegia oxysepala HOM05D005710 ORTHO05D004657 1.1e-06 56.6 53 56.6
Gorai.006G011600 Gossypium raimondii HOM05D005710 ORTHO05D004657 1.1e-06 56.6 49 55.1
Manes.01G098200 Manihot esculenta HOM05D005710 ORTHO05D004657 1.1e-06 56.6 51 54.9
CiPaw.04G057600 Carya illinoinensis HOM05D005710 ORTHO05D004657 2.0e-06 55.8 53 56.6
PSO017G2516 Papaver somniferum HOM05D005710 ORTHO05D004657 2.0e-06 55.8 71 46.5
Atru.chr8.406 Acer truncatum HOM05D005710 ORTHO05D004657 2.6e-06 55.5 61 49.2
CANSAT64G1937 Cannabis sativa HOM05D005710 ORTHO05D004657 2.6e-06 55.5 53 54.7
TWI60G1009 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 2.6e-06 55.5 56 57.1
TAR629G0087 Trochodendron aralioides HOM05D005710 ORTHO05D004657 3.3e-06 55.1 51 56.9
Ciclev10011685m.g Citrus clementina HOM05D005710 ORTHO05D004657 4.4e-06 54.7 55 52.7
vmacro18155 Vaccinium macrocarpon HOM05D005710 ORTHO05D004657 5.7e-06 54.3 88 37.5
arahy.Tifrunner.gnm1.ann1.B1JWTK Arachis hypogaea HOM05D005710 ORTHO05D004657 7.4e-06 53.9 49 63.3
arahy.Tifrunner.gnm1.ann1.EE1ZRN Arachis hypogaea HOM05D005710 ORTHO05D004657 7.4e-06 53.9 49 63.3
MD00G1156300 Malus domestica HOM05D005710 ORTHO05D004657 7.4e-06 53.9 53 56.6


User provided reference genes

Program Settings