Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G48150 Arabidopsis lyrata HOM05D008464 ORTHO05D014850 1.7e-71 272.7 148 100.0
AT1G62220 Arabidopsis thaliana HOM05D008464 ORTHO05D014850 4.5e-45 184.9 142 76.8
AT1G62060 Arabidopsis thaliana HOM05D008464 ORTHO05D014850 8.0e-34 147.5 147 63.3
AL2G14040 Arabidopsis lyrata HOM05D008464 ORTHO05D014850 2.9e-31 139.0 148 61.5
AT1G62000 Arabidopsis thaliana HOM05D008464 ORTHO05D014850 2.9e-31 139.0 147 59.9
AL2G14030 Arabidopsis lyrata HOM05D008464 ORTHO05D014850 1.9e-30 136.3 129 65.9
AT1G62080 Arabidopsis thaliana HOM05D008464 ORTHO05D014850 4.9e-23 111.7 147 52.4
Carub.0002s0281 Capsella rubella HOM05D008464 ORTHO05D014850 4.1e-22 108.6 94 64.9
Carub.0002s0282 Capsella rubella HOM05D008464 ORTHO05D014850 3.9e-20 102.1 146 50.7
AL2G13700 Arabidopsis lyrata HOM05D008464 ORTHO05D014850 8.6e-20 100.9 103 62.1
Carub.0002s0279 Capsella rubella HOM05D008464 ORTHO05D014850 2.3e-17 92.8 79 64.6
Carub.0002s0304 Capsella rubella HOM05D008464 ORTHO05D014850 1.4e-14 83.6 143 44.8
Thhalv10023864m.g Eutrema salsugineum HOM05D008464 ORTHO05D011143 1.0e-12 77.4 105 49.5
Carub.0002s0283 Capsella rubella HOM05D008464 ORTHO05D014850 2.3e-12 76.3 145 40.7
CARHR049900 Cardamine hirsuta HOM05D008464 ORTHO05D011143 3.9e-12 75.5 141 45.4
A09p16500 Brassica napus HOM05D008464 ORTHO05D011143 6.2e-10 68.2 142 40.8
C09p20030 Brassica napus HOM05D008464 ORTHO05D011143 6.2e-10 68.2 144 42.4
BolC9t54911H Brassica oleracea HOM05D008464 ORTHO05D011143 6.2e-10 68.2 144 42.4
BraA09t37288Z Brassica rapa HOM05D008464 ORTHO05D011143 6.2e-10 68.2 142 40.8
AL2G13690 Arabidopsis lyrata HOM05D008464 ORTHO05D011143 8.1e-10 67.8 122 45.1
A09p16470 Brassica napus HOM05D008464 ORTHO05D011143 6.8e-09 64.7 144 42.4
BraA09t37284Z Brassica rapa HOM05D008464 ORTHO05D011143 8.9e-09 64.3 135 43.0
AT1G62225 Arabidopsis thaliana HOM05D008464 ORTHO05D011143 1.2e-08 63.9 115 47.8
Carub.0002s0278 Capsella rubella HOM05D008464 ORTHO05D011143 2.0e-08 63.2 101 45.5
Sp2g02460 Schrenkiella parvula HOM05D008464 ORTHO05D011143 4.4e-08 62.0 148 43.2
Carub.0002s0280 Capsella rubella HOM05D008464 ORTHO05D114275 2.2e-07 59.7 80 50.0
BcaC04g22373 Brassica carinata HOM05D008464 ORTHO05D011143 6.4e-07 58.2 137 39.4
BcaC04g22374 Brassica carinata HOM05D008464 ORTHO05D011143 6.4e-07 58.2 137 39.4
BcaC08g45479 Brassica carinata HOM05D008464 ORTHO05D011143 6.4e-07 58.2 140 36.4
BolC6t38268H Brassica oleracea HOM05D008464 ORTHO05D011143 6.4e-07 58.2 140 36.4
BraA07t30447Z Brassica rapa HOM05D008464 ORTHO05D011143 2.4e-06 56.2 128 41.4
Thhalv10024101m.g Eutrema salsugineum HOM05D008464 ORTHO05D011143 3.2e-06 55.8 100 42.0


User provided reference genes

Program Settings