Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G47680 Arabidopsis lyrata HOM05D006662 ORTHO05D008378 4.4e-112 407.9 198 100.0
AT2G15890 Arabidopsis thaliana HOM05D006662 ORTHO05D008378 7.1e-102 374.0 204 91.2
Carub.0003s2977 Capsella rubella HOM05D006662 ORTHO05D008378 8.9e-97 357.1 206 86.9
CARHR106220 Cardamine hirsuta HOM05D006662 ORTHO05D008378 1.4e-94 349.7 205 85.4
Sp3g29170 Schrenkiella parvula HOM05D006662 ORTHO05D008378 5.4e-94 347.8 208 86.1
Thhalv10022827m.g Eutrema salsugineum HOM05D006662 ORTHO05D008378 1.7e-92 342.8 208 84.6
BcaC01g03048 Brassica carinata HOM05D006662 ORTHO05D008378 8.4e-87 323.9 205 79.5
A03p45640 Brassica napus HOM05D006662 ORTHO05D008378 8.4e-87 323.9 205 79.5
C03p56690 Brassica napus HOM05D006662 ORTHO05D008378 8.4e-87 323.9 205 79.5
BolC3t17953H Brassica oleracea HOM05D006662 ORTHO05D008378 8.4e-87 323.9 205 79.5
BraA03t13696Z Brassica rapa HOM05D006662 ORTHO05D008378 4.2e-86 321.6 205 79.0
BcaB08g34616 Brassica carinata HOM05D006662 ORTHO05D008378 1.1e-83 313.5 168 89.9
Aa31LG8G13410 Aethionema arabicum HOM05D006662 ORTHO05D008378 4.3e-83 311.6 213 74.6
THA.LOC104807344 Tarenaya hassleriana HOM05D006662 ORTHO05D008378 7.3e-75 284.3 210 66.7
CiPaw.05G058200 Carya illinoinensis HOM05D006662 ORTHO05D008378 2.6e-64 249.2 206 64.1
Thecc.02G093600 Theobroma cacao HOM05D006662 ORTHO05D008378 6.5e-63 244.6 209 61.2
Cpa.g.sc62.73 Carica papaya HOM05D006662 ORTHO05D008378 1.1e-62 243.8 210 61.9
Sed0017443 Sechium edule HOM05D006662 ORTHO05D008378 1.4e-62 243.4 205 61.0
CSS0011742 Camellia sinensis var. sinensis HOM05D006662 ORTHO05D008378 4.6e-61 238.4 181 64.6
Eucgr.I01209 Eucalyptus grandis HOM05D006662 ORTHO05D008378 7.9e-61 237.7 186 63.4
Gohir.A12G027000 Gossypium hirsutum HOM05D006662 ORTHO05D008378 8.7e-60 234.2 209 57.9
Sed0006883 Sechium edule HOM05D006662 ORTHO05D008378 8.7e-60 234.2 206 58.7
ClCG09G017640 Citrullus lanatus HOM05D006662 ORTHO05D008378 2.5e-59 232.6 181 64.6
FAN15G0063 Fragaria x ananassa HOM05D006662 ORTHO05D008378 3.3e-59 232.3 205 62.9
RcHm_v2.0_Chr6g0259611 Rosa chinensis HOM05D006662 ORTHO05D008378 3.3e-59 232.3 206 60.2
Prupe.8G113800 Prunus persica HOM05D006662 ORTHO05D008378 5.7e-59 231.5 217 59.4
Gohir.D12G026500 Gossypium hirsutum HOM05D006662 ORTHO05D008378 2.1e-58 229.6 207 57.5
FvH4_2g07110 Fragaria vesca HOM05D006662 ORTHO05D008378 3.7e-58 228.8 206 61.2
TWI75G0095 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 3.7e-58 228.8 216 56.5
Hma1.2p1_0584F.1_g183200 Hydrangea macrophylla HOM05D006662 ORTHO05D008378 4.8e-58 228.4 160 69.4
Ah.01g019950 Amaranthus hybridus HOM05D006662 ORTHO05D008378 6.3e-58 228.0 210 56.2
CANSAT25G1076 Cannabis sativa HOM05D006662 ORTHO05D008378 8.2e-58 227.6 206 60.7
MD05G1073200 Malus domestica HOM05D006662 ORTHO05D008378 8.2e-58 227.6 212 56.1
QL11p039030 Quercus lobata HOM05D006662 ORTHO05D008378 8.2e-58 227.6 170 67.1
arahy.Tifrunner.gnm1.ann1.XIH6CG Arachis hypogaea HOM05D006662 ORTHO05D008378 1.1e-57 227.3 207 57.0
MD10G1087700 Malus domestica HOM05D006662 ORTHO05D008378 1.1e-57 227.3 211 59.2
Manes.17G095800 Manihot esculenta HOM05D006662 ORTHO05D008378 1.1e-57 227.3 209 57.9
FAN20G1592 Fragaria x ananassa HOM05D006662 ORTHO05D008378 1.4e-57 226.9 178 65.7
GSVIVG01031844001 Vitis vinifera HOM05D006662 ORTHO05D008378 1.4e-57 226.9 207 58.0
arahy.Tifrunner.gnm1.ann1.WYH7K2 Arachis hypogaea HOM05D006662 ORTHO05D008378 2.4e-57 226.1 207 56.5
Potri.009G108200 Populus trichocarpa HOM05D006662 ORTHO05D008378 2.4e-57 226.1 209 57.9
Cfa004939 Carpinus fangiana HOM05D006662 ORTHO05D008378 4.1e-57 225.3 207 58.9
MELO3C021923.2 Cucumis melo HOM05D006662 ORTHO05D008378 9.0e-57 224.2 212 59.0
QL11p040314 Quercus lobata HOM05D006662 ORTHO05D008378 9.0e-57 224.2 170 65.9
COL.COLO4_11735 Corchorus olitorius HOM05D006662 ORTHO05D008378 1.5e-56 223.4 204 57.4
DCAR_022073 Daucus carota HOM05D006662 ORTHO05D008378 2.0e-56 223.0 187 58.3
Sc18g0004870 Simmondsia chinensis HOM05D006662 ORTHO05D008378 2.6e-56 222.6 179 57.5
CsaV3_2G014240 Cucumis sativus L. HOM05D006662 ORTHO05D008378 4.5e-56 221.9 209 56.5
Peaxi162Scf00016g01334 Petunia axillaris HOM05D006662 ORTHO05D008378 4.5e-56 221.9 202 55.9
TWI79G0535 Tripterygium wilfordii HOM05D006662 ORTHO05D008378 4.5e-56 221.9 160 65.6
VMungo0251G2580 Vigna mungo HOM05D006662 ORTHO05D008378 4.5e-56 221.9 172 64.0
HanXRQChr16g0505251 Helianthus annuus HOM05D006662 ORTHO05D008378 7.6e-56 221.1 196 56.6
PGR142G1799 Punica granatum HOM05D006662 ORTHO05D008378 1.3e-55 220.3 206 57.3
TAR625G0716 Trochodendron aralioides HOM05D006662 ORTHO05D008378 1.7e-55 219.9 192 57.3
AUR62016649 Chenopodium quinoa HOM05D006662 ORTHO05D008378 3.8e-55 218.8 177 57.1
Ciclev10029278m.g Citrus clementina HOM05D006662 ORTHO05D008378 3.8e-55 218.8 212 55.7
TAR381G0443 Trochodendron aralioides HOM05D006662 ORTHO05D008378 5.0e-55 218.4 169 63.9
AUR62011410 Chenopodium quinoa HOM05D006662 ORTHO05D008378 6.5e-55 218.0 176 56.8
Gorai.008G026800 Gossypium raimondii HOM05D006662 ORTHO05D008378 6.5e-55 218.0 234 51.7
Lsat_1_v5_gn_7_87521 Lactuca sativa HOM05D006662 ORTHO05D008378 6.5e-55 218.0 189 57.7
Ca_18646_v3 Cicer arietinum L. HOM05D006662 ORTHO05D008378 8.4e-55 217.6 170 62.4
Phvul.003G295900 Phaseolus vulgaris HOM05D006662 ORTHO05D008378 1.4e-54 216.9 187 59.4
Glyma.02G136700 Glycine max HOM05D006662 ORTHO05D008378 1.9e-54 216.5 203 56.2
Lalb_Chr16g0384501 Lupinus albus HOM05D006662 ORTHO05D008378 4.2e-54 215.3 170 61.8
Nitab4.5_0001401g0110 Nicotiana tabacum HOM05D006662 ORTHO05D008378 5.5e-54 214.9 205 54.1
Nitab4.5_0013034g0030 Nicotiana tabacum HOM05D006662 ORTHO05D008378 5.5e-54 214.9 205 53.7
MSTRG.20127 Avicennia marina HOM05D006662 ORTHO05D008378 9.3e-54 214.2 179 58.1
ECA234G3259 Erigeron canadensis HOM05D006662 ORTHO05D008378 9.3e-54 214.2 184 59.8
Lalb_Chr05g0218931 Lupinus albus HOM05D006662 ORTHO05D008378 9.3e-54 214.2 170 62.9
Oeu034073.1 Olea europaea HOM05D006662 ORTHO05D008378 9.3e-54 214.2 170 62.4
MSTRG.16773 Avicennia marina HOM05D006662 ORTHO05D008378 1.2e-53 213.8 190 56.3
MBI16_g19891_MAGBIO Magnolia biondii HOM05D006662 ORTHO05D008378 1.2e-53 213.8 169 61.5
Lj4g0000402 Lotus japonicus HOM05D006662 ORTHO05D008378 1.6e-53 213.4 171 63.2
Oeu034074.1 Olea europaea HOM05D006662 ORTHO05D008378 2.7e-53 212.6 170 61.8
Ciclev10029277m.g Citrus clementina HOM05D006662 ORTHO05D008378 6.1e-53 211.5 212 55.2
Haze_02471 Corylus avellana HOM05D006662 ORTHO05D008378 7.9e-53 211.1 230 53.5
Nn6g32129 Nelumbo nucifera HOM05D006662 ORTHO05D008378 7.9e-53 211.1 203 53.2
PSO541G1188 Papaver somniferum HOM05D006662 ORTHO05D008378 1.0e-52 210.7 164 61.0
CDE04G2620 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 1.8e-52 209.9 205 53.2
PSO675G4443 Papaver somniferum HOM05D006662 ORTHO05D008378 8.7e-52 207.6 167 60.5
PGSC0003DMG400025927 Solanum tuberosum HOM05D006662 ORTHO05D008378 1.5e-51 206.8 169 60.9
Cc02_g18370 Coffea canephora HOM05D006662 ORTHO05D008378 3.3e-51 205.7 164 61.0
unitig_60.g25450 Utricularia gibba HOM05D006662 ORTHO05D008378 3.3e-51 205.7 187 54.5
CDE02G2985 Ceratophyllum demersum HOM05D006662 ORTHO05D008378 7.4e-51 204.5 205 51.2
Solyc01g108910.4 Solanum lycopersicum HOM05D006662 ORTHO05D008378 7.4e-51 204.5 162 63.0
Sopen01g051110 Solanum pennellii HOM05D006662 ORTHO05D008378 9.7e-51 204.1 161 62.1
Atru.chr5.2838 Acer truncatum HOM05D006662 ORTHO05D008378 2.2e-50 203.0 164 62.2
Psat7g120680 Pisum sativum HOM05D006662 ORTHO05D008378 2.2e-50 203.0 190 53.2
TPR.G23518 Trifolium pratense HOM05D006662 ORTHO05D008378 2.2e-50 203.0 174 58.6
Sabra09G0082500 Salix brachista HOM05D006662 ORTHO05D008378 8.2e-50 201.1 195 56.9
ECA236G2218 Erigeron canadensis HOM05D001803 ORTHO05D001686 1.1e-49 200.7 171 57.9
Manes.15G144700 Manihot esculenta HOM05D006662 ORTHO05D008378 6.9e-49 198.0 162 59.3
Medtr4g087160 Medicago truncatula HOM05D006662 ORTHO05D008378 6.9e-49 198.0 159 59.7
Duzib132G0812 Durio zibethinus HOM05D006662 ORTHO05D008378 7.7e-48 194.5 200 52.5
Glyma.07G208750 Glycine max HOM05D006662 ORTHO05D000003 7.7e-48 194.5 159 62.3
ATR0733G082 Amborella trichopoda HOM05D006662 ORTHO05D008378 1.0e-47 194.1 175 54.9
Oeu057667.1 Olea europaea HOM05D006662 ORTHO05D008378 1.9e-46 189.9 200 51.5
Migut.B00297 Erythranthe guttata HOM05D006662 ORTHO05D008378 3.2e-46 189.1 149 61.1
EL10Ac9g21803 Beta vulgaris HOM05D006662 ORTHO05D008378 7.9e-45 184.5 202 49.5
SalBow6G2487 Salvia bowleyana HOM05D006662 ORTHO05D008378 1.4e-44 183.7 195 50.3
Aqoxy6G00923 Aquilegia oxysepala HOM05D006662 ORTHO05D008378 5.1e-44 181.8 182 54.4
SGA_v2.0_scaffold32G13129 Striga asiatica HOM05D006662 ORTHO05D008378 2.8e-42 176.0 174 52.3
Hund06197 Selenicereus undatus HOM05D006662 ORTHO05D008378 1.7e-34 150.2 171 47.4
HPP92_017773 Vanilla planifolia HOM05D006662 ORTHO05D008378 1.6e-32 143.7 195 41.0
Zm00001eb058550 Zea mays HOM05D006662 ORTHO05D008378 7.2e-30 134.8 181 39.8
Actinidia00472 Actinidia chinensis HOM05D006662 ORTHO05D008378 9.4e-30 134.4 157 46.5
Dinv23602 Davidia involucrata HOM05D000546 ORTHO05D000398 1.6e-29 133.7 85 72.9
Zm00001eb214110 Zea mays HOM05D006662 ORTHO05D008378 2.7e-29 132.9 181 39.8
SEGI_00093 Sequoiadendron giganteum HOM05D006662 ORTHO05D008378 1.4e-28 130.6 164 43.3
Lj9A364T65 Lonicera japonica HOM05D006662 ORTHO05D008378 1.1e-27 127.5 232 36.6
Pp3c25_14850 Physcomitrium patens HOM05D006662 ORTHO05D008378 1.0e-23 114.4 185 36.2
Duzib052G0855 Durio zibethinus HOM05D006662 ORTHO05D008378 5.5e-22 108.6 102 53.9
SMO351G0555 Selaginella moellendorffii HOM05D006662 ORTHO05D008378 2.7e-21 106.3 186 34.4
AagrBONN_evm.TU.Sc2ySwM_117.2125 Anthoceros agrestis HOM05D006662 ORTHO05D008378 6.1e-21 105.1 196 32.7
Peaxi162Scf00068g00075 Petunia axillaris HOM05D006662 ORTHO05D008378 8.8e-20 101.3 89 57.3
Mapoly0184s0005 Marchantia polymorpha HOM05D006662 ORTHO05D008378 3.4e-19 99.4 197 29.9
Os03g0765500 Oryza sativa ssp. japonica HOM05D006662 ORTHO05D008378 3.8e-15 85.9 134 36.6
HanXRQChr16g0505241 Helianthus annuus HOM05D000009 ORTHO05D000008 5.0e-15 85.5 104 46.2
Pp3c5_28350 Physcomitrium patens HOM05D006662 ORTHO05D008378 4.2e-14 82.4 171 29.2
Peaxi162Scf00140g10022 Petunia axillaris HOM05D006662 ORTHO05D008378 8.8e-12 74.7 97 42.3
Rhsim11G0170000 Rhododendron simsii HOM05D006662 ORTHO05D008378 1.7e-07 60.5 105 33.3


User provided reference genes

Program Settings