Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G47110 Arabidopsis lyrata HOM05D008745 ORTHO05D010941 1.7e-48 195.7 99 100.0
AT2G15345 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 4.3e-31 137.9 98 75.5
Sp3g15440 Schrenkiella parvula HOM05D008745 ORTHO05D010941 1.2e-22 109.8 97 64.9
Carub.0006s2723 Capsella rubella HOM05D008745 ORTHO05D010941 1.6e-22 109.4 97 53.6
Thhalv10021601m.g Eutrema salsugineum HOM05D008745 ORTHO05D010941 4.7e-22 107.8 97 60.8
Sp3g15450 Schrenkiella parvula HOM05D008745 ORTHO05D010941 1.1e-21 106.7 97 57.7
CARHR092500 Cardamine hirsuta HOM05D008745 ORTHO05D010941 1.4e-21 106.3 93 62.4
Thhalv10022084m.g Eutrema salsugineum HOM05D008745 ORTHO05D010941 8.9e-21 103.6 97 59.8
AL3G30260 Arabidopsis lyrata HOM05D008745 ORTHO05D010941 8.3e-19 97.1 97 52.6
Sp3g15410 Schrenkiella parvula HOM05D008745 ORTHO05D010941 1.9e-18 95.9 97 55.7
Carub.0003s2924 Capsella rubella HOM05D008745 ORTHO05D010941 4.6e-17 91.3 96 52.1
BcaC05g28818 Brassica carinata HOM05D008745 ORTHO05D010941 1.0e-16 90.1 98 50.0
C05p49220 Brassica napus HOM05D008745 ORTHO05D010941 1.0e-16 90.1 98 50.0
BcaB06g25813 Brassica carinata HOM05D008745 ORTHO05D010941 2.3e-16 89.0 98 52.0
A05p32570 Brassica napus HOM05D008745 ORTHO05D010941 2.3e-16 89.0 98 50.0
AT3G17225 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 3.0e-16 88.6 96 50.0
BolC5t33663H Brassica oleracea HOM05D008745 ORTHO05D010941 5.0e-16 87.8 98 50.0
BraA05t22081Z Brassica rapa HOM05D008745 ORTHO05D010941 8.6e-16 87.0 98 49.0
AT3G17227 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 1.1e-15 86.7 97 48.5
AT3G17230 Arabidopsis thaliana HOM05D008745 ORTHO05D010941 3.3e-15 85.1 97 48.5
BcaB04g18935 Brassica carinata HOM05D008745 ORTHO05D010941 8.9e-13 77.0 96 49.0
BcaC05g28814 Brassica carinata HOM05D008745 ORTHO05D010941 1.2e-12 76.6 97 44.3
C05p49180 Brassica napus HOM05D008745 ORTHO05D010941 1.5e-12 76.3 97 44.3
BraA05t22077Z Brassica rapa HOM05D008745 ORTHO05D010941 5.8e-12 74.3 97 43.3
Carub.0002s0897 Capsella rubella HOM05D008745 ORTHO05D010941 7.5e-12 73.9 96 42.7
BolC3t17147H Brassica oleracea HOM05D008745 ORTHO05D010941 1.3e-11 73.2 92 51.1
A05p32510 Brassica napus HOM05D008745 ORTHO05D010941 1.7e-11 72.8 97 42.3
BolC5t33659H Brassica oleracea HOM05D008745 ORTHO05D010941 3.7e-11 71.6 97 42.3
Carub.0002s1162 Capsella rubella HOM05D008745 ORTHO05D010941 3.7e-11 71.6 97 41.2
Carub.0006s2544 Capsella rubella HOM05D008745 ORTHO05D010941 4.9e-11 71.2 92 44.6
BcaB06g25814 Brassica carinata HOM05D008745 ORTHO05D010941 6.4e-11 70.9 97 41.2
BcaC01g03777 Brassica carinata HOM05D008745 ORTHO05D010941 1.1e-10 70.1 90 50.0
A03p40110 Brassica napus HOM05D008745 ORTHO05D010941 1.1e-10 70.1 90 50.0
C03p48680 Brassica napus HOM05D008745 ORTHO05D010941 1.1e-10 70.1 90 50.0
BraA03t13161Z Brassica rapa HOM05D008745 ORTHO05D010941 4.1e-10 68.2 90 48.9
AL3G30270 Arabidopsis lyrata HOM05D008745 ORTHO05D010941 7.3e-07 57.4 65 50.8


User provided reference genes

Program Settings