Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G46820 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 5.2e-44 180.6 90 100.0
AL3G46810 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 5.3e-12 74.3 85 52.9
AT2G15010 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 5.3e-12 74.3 80 55.0
Carub.0007s3246 Capsella rubella HOM05D007540 ORTHO05D009531 1.5e-11 72.8 79 46.8
C03p44700 Brassica napus HOM05D007540 ORTHO05D009531 4.4e-11 71.2 80 45.0
BolC3t16732H Brassica oleracea HOM05D007540 ORTHO05D009531 4.4e-11 71.2 80 45.0
BcaB01g02546 Brassica carinata HOM05D007540 ORTHO05D009531 5.8e-11 70.9 82 46.3
Carub.0005s1237 Capsella rubella HOM05D007540 ORTHO05D009531 9.9e-11 70.1 80 47.5
BcaB04g18623 Brassica carinata HOM05D007540 ORTHO05D009531 1.7e-10 69.3 81 49.4
Carub.0007s3756 Capsella rubella HOM05D007540 ORTHO05D009531 1.7e-10 69.3 80 46.2
Carub.0007s3755 Capsella rubella HOM05D007540 ORTHO05D009531 3.8e-10 68.2 83 49.4
Carub.0007s3751 Capsella rubella HOM05D007540 ORTHO05D009531 4.9e-10 67.8 80 47.5
A03p36900 Brassica napus HOM05D007540 ORTHO05D009531 8.4e-10 67.0 80 45.0
BraA03t12853Z Brassica rapa HOM05D007540 ORTHO05D009531 8.4e-10 67.0 80 45.0
Carub.0003s3278 Capsella rubella HOM05D007540 ORTHO05D009531 8.4e-10 67.0 80 40.0
BcaB01g02415 Brassica carinata HOM05D007540 ORTHO05D009531 1.4e-09 66.2 80 46.2
BcaB01g02553 Brassica carinata HOM05D007540 ORTHO05D009531 1.4e-09 66.2 81 46.9
BcaB01g04012 Brassica carinata HOM05D007540 ORTHO05D009531 1.9e-09 65.9 80 50.0
BcaB01g04015 Brassica carinata HOM05D007540 ORTHO05D009531 1.9e-09 65.9 80 50.0
BcaB01g04016 Brassica carinata HOM05D007540 ORTHO05D009531 1.9e-09 65.9 80 50.0
Carub.0001s3826 Capsella rubella HOM05D007540 ORTHO05D009531 1.9e-09 65.9 80 43.8
Carub.0002s0328 Capsella rubella HOM05D007540 ORTHO05D009531 1.9e-09 65.9 80 46.2
CARHR085700 Cardamine hirsuta HOM05D007540 ORTHO05D009531 2.4e-09 65.5 80 52.5
CANSAT25G3055 Cannabis sativa HOM05D007540 ORTHO05D009531 4.2e-09 64.7 81 44.4
Carub.0007s3753 Capsella rubella HOM05D007540 ORTHO05D009531 4.2e-09 64.7 88 42.0
BcaB01g04013 Brassica carinata HOM05D007540 ORTHO05D009531 5.4e-09 64.3 80 48.8
BcaB01g04014 Brassica carinata HOM05D007540 ORTHO05D009531 5.4e-09 64.3 80 48.8
BcaB01g04017 Brassica carinata HOM05D007540 ORTHO05D009531 5.4e-09 64.3 80 48.8
CANSAT35G1587 Cannabis sativa HOM05D007540 ORTHO05D009531 5.4e-09 64.3 80 43.8
SalBow8G3153 Salvia bowleyana HOM05D007540 ORTHO05D009531 7.1e-09 63.9 85 40.0
CANSAT25G2830 Cannabis sativa HOM05D007540 ORTHO05D009531 9.3e-09 63.5 81 44.4
Carub.0003s1043 Capsella rubella HOM05D007540 ORTHO05D009531 9.3e-09 63.5 80 41.2
Carub.0007s3754 Capsella rubella HOM05D007540 ORTHO05D009531 1.2e-08 63.2 84 40.5
Carub.0007s3748 Capsella rubella HOM05D007540 ORTHO05D009531 1.6e-08 62.8 80 40.0
CANSAT25G1121 Cannabis sativa HOM05D007540 ORTHO05D009531 2.1e-08 62.4 81 43.2
Carub.0007s3749 Capsella rubella HOM05D007540 ORTHO05D009531 2.7e-08 62.0 80 41.2
A02p14410 Brassica napus HOM05D007540 ORTHO05D009531 3.5e-08 61.6 82 50.0
SalBow8G0994 Salvia bowleyana HOM05D007540 ORTHO05D009531 3.5e-08 61.6 85 41.2
Carub.0004s0563 Capsella rubella HOM05D007540 ORTHO05D009531 4.6e-08 61.2 80 38.8
Carub.0003s3276 Capsella rubella HOM05D007540 ORTHO05D009531 6.0e-08 60.8 80 38.8
Carub.0006s2979 Capsella rubella HOM05D007540 ORTHO05D009531 6.0e-08 60.8 87 41.4
BraA02t06505Z Brassica rapa HOM05D007540 ORTHO05D009531 7.8e-08 60.5 82 48.8
Carub.0005s0981 Capsella rubella HOM05D007540 ORTHO05D009531 7.8e-08 60.5 81 43.2
Carub.0007s3757 Capsella rubella HOM05D007540 ORTHO05D009531 7.8e-08 60.5 87 39.1
BcaB04g16944 Brassica carinata HOM05D007540 ORTHO05D009531 1.0e-07 60.1 80 42.5
Carub.0003s3277 Capsella rubella HOM05D007540 ORTHO05D009531 1.0e-07 60.1 80 40.0
AT5G36910 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 1.3e-07 59.7 80 42.5
BcaC03g14859 Brassica carinata HOM05D007540 ORTHO05D009531 1.7e-07 59.3 79 44.3
Carub.0002s0833 Capsella rubella HOM05D007540 ORTHO05D009531 1.7e-07 59.3 80 38.8
Carub.0007s3752 Capsella rubella HOM05D007540 ORTHO05D009531 1.7e-07 59.3 79 40.5
Aqoxy4G00585 Aquilegia oxysepala HOM05D007540 ORTHO05D009531 2.3e-07 58.9 87 42.5
AL7G45500 Arabidopsis lyrata HOM05D007540 ORTHO05D009531 2.3e-07 58.9 80 43.8
BraA01t04213Z Brassica rapa HOM05D007540 ORTHO05D009531 5.1e-07 57.8 68 45.6
SalBow5G5034 Salvia bowleyana HOM05D007540 ORTHO05D009531 6.6e-07 57.4 81 40.7
Carub.0003s3275 Capsella rubella HOM05D007540 ORTHO05D009531 1.1e-06 56.6 80 37.5
CARHR057950 Cardamine hirsuta HOM05D007540 ORTHO05D009531 2.5e-06 55.5 68 48.5
AT1G66100 Arabidopsis thaliana HOM05D007540 ORTHO05D009531 3.3e-06 55.1 80 38.8
SalBow5G1295 Salvia bowleyana HOM05D007540 ORTHO05D009531 3.3e-06 55.1 80 35.0
Carub.0007s3736 Capsella rubella HOM05D007540 ORTHO05D009531 4.3e-06 54.7 84 36.9
SalBow5G1353 Salvia bowleyana HOM05D007540 ORTHO05D009531 5.6e-06 54.3 80 35.0
SalBow5G2392 Salvia bowleyana HOM05D007540 ORTHO05D009531 5.6e-06 54.3 81 39.5
SalBow5G3852 Salvia bowleyana HOM05D007540 ORTHO05D009531 5.6e-06 54.3 81 39.5


User provided reference genes

Program Settings