Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G46610 Arabidopsis lyrata HOM05D005448 ORTHO05D006405 8.4e-158 560.5 314 100.0
AL1G28800 Arabidopsis lyrata HOM05D005448 ORTHO05D006405 1.4e-51 207.6 109 95.4
AL3G43910 Arabidopsis lyrata HOM05D005448 ORTHO05D006405 1.9e-48 197.2 140 78.6
AL6G18290 Arabidopsis lyrata HOM05D005448 ORTHO05D006405 4.6e-47 192.6 118 84.7
AT5G07950 Arabidopsis thaliana HOM05D005448 ORTHO05D006405 1.3e-46 191.0 118 82.2
CARHR205240 Cardamine hirsuta HOM05D005448 ORTHO05D006405 1.6e-44 184.1 118 78.0
Carub.0006s0685 Capsella rubella HOM05D005448 ORTHO05D006405 2.8e-44 183.3 118 76.3
BcaC06g32511 Brassica carinata HOM05D001913 ORTHO05D008250 4.5e-42 176.0 119 72.3
Sp6g34990 Schrenkiella parvula HOM05D005448 ORTHO05D006405 4.5e-42 176.0 136 69.9
BraA10t44915Z Brassica rapa HOM05D001913 ORTHO05D006405 1.0e-41 174.9 118 73.7
Thhalv10014193m.g Eutrema salsugineum HOM05D005448 ORTHO05D006405 1.7e-41 174.1 149 64.4
C09p68980 Brassica napus HOM05D006409 ORTHO05D006405 1.9e-40 170.6 118 72.9
Aa31LG3G18560 Aethionema arabicum HOM05D005448 ORTHO05D006405 1.6e-39 167.5 118 72.0
BcaB05g21593 Brassica carinata HOM05D005448 ORTHO05D006405 6.0e-39 165.6 118 72.9
A10p28660 Brassica napus HOM05D006409 ORTHO05D008250 5.1e-38 162.5 119 69.7
BraA02t04938Z Brassica rapa HOM05D005448 ORTHO05D006405 3.3e-37 159.8 118 70.3
AL1G43330 Arabidopsis lyrata HOM05D005448 ORTHO05D006405 4.3e-37 159.5 85 94.1
AL4G20140 Arabidopsis lyrata HOM05D005448 ORTHO05D006405 4.3e-37 159.5 85 94.1
C02p03370 Brassica napus HOM05D005448 ORTHO05D006405 4.8e-36 156.0 140 62.9
BolC2t06299H Brassica oleracea HOM05D005448 ORTHO05D006405 4.8e-36 156.0 140 62.9
THA.LOC104801284 Tarenaya hassleriana HOM05D005448 ORTHO05D006405 2.9e-33 146.7 117 63.2
BcaC03g13203 Brassica carinata HOM05D005448 ORTHO05D006405 3.8e-33 146.4 162 54.3
Potri.018G051500 Populus trichocarpa HOM05D005448 ORTHO05D006405 9.3e-32 141.7 124 58.9
AL7G18100 Arabidopsis lyrata HOM05D005448 ORTHO05D006405 2.7e-31 140.2 153 54.9
AL3G19900 Arabidopsis lyrata HOM05D005448 ORTHO05D006405 3.6e-31 139.8 153 54.2
Sabra18G0047800 Salix brachista HOM05D005448 ORTHO05D006405 6.1e-31 139.0 140 53.6
Duzib205G1002 Durio zibethinus HOM05D005448 ORTHO05D006405 7.9e-31 138.7 119 58.0
C04p62800 Brassica napus HOM05D005448 ORTHO05D006405 5.1e-30 136.0 121 62.8
BolC4t27763H Brassica oleracea HOM05D005448 ORTHO05D006405 1.5e-29 134.4 121 62.0
Gohir.D11G036400 Gossypium hirsutum HOM05D005448 ORTHO05D006405 1.9e-29 134.0 119 58.0
Gorai.007G039200 Gossypium raimondii HOM05D005448 ORTHO05D006405 1.9e-29 134.0 119 58.0
Haze_07701 Corylus avellana HOM05D005448 ORTHO05D006405 4.3e-29 132.9 130 55.4
Gohir.A11G033100 Gossypium hirsutum HOM05D005448 ORTHO05D006405 4.3e-29 132.9 140 52.9
Oeu001027.1 Olea europaea HOM05D005448 ORTHO05D006405 2.8e-28 130.2 130 52.3
Cpa.g.sc94.25 Carica papaya HOM05D005448 ORTHO05D006405 4.8e-28 129.4 131 53.4
Dinv10698 Davidia involucrata HOM05D005448 ORTHO05D006405 4.8e-28 129.4 119 58.0
Manes.06G086000 Manihot esculenta HOM05D005448 ORTHO05D006405 4.8e-28 129.4 119 56.3
TAR371G1280 Trochodendron aralioides HOM05D005448 ORTHO05D006405 6.3e-28 129.0 131 49.6
QL10p019149 Quercus lobata HOM05D005448 ORTHO05D006405 8.2e-28 128.6 137 52.6
GSVIVG01007888001 Vitis vinifera HOM05D005448 ORTHO05D006405 8.2e-28 128.6 119 58.0
PGR044G0604 Punica granatum HOM05D005448 ORTHO05D006405 1.1e-27 128.3 128 56.2
Solyc06g069510.3 Solanum lycopersicum HOM05D005448 ORTHO05D006405 1.4e-27 127.9 119 55.5
CAN.G587.40 Capsicum annuum HOM05D005448 ORTHO05D006405 2.4e-27 127.1 119 54.6
Sopen06g026800 Solanum pennellii HOM05D005448 ORTHO05D006405 2.4e-27 127.1 119 55.5
CiPaw.11G051600 Carya illinoinensis HOM05D005448 ORTHO05D006405 3.1e-27 126.7 137 52.6
GSVIVG01007889001 Vitis vinifera HOM05D005448 ORTHO05D006405 3.1e-27 126.7 118 57.6
Thecc.03G099500 Theobroma cacao HOM05D005448 ORTHO05D006405 5.3e-27 125.9 130 52.3
Actinidia38176 Actinidia chinensis HOM05D005448 ORTHO05D006405 2.6e-26 123.6 118 55.1
Dinv17396 Davidia involucrata HOM05D005448 ORTHO05D006405 2.6e-26 123.6 116 56.9
Eucgr.F03643 Eucalyptus grandis HOM05D005448 ORTHO05D006405 2.6e-26 123.6 119 53.8
Prupe.7G041400 Prunus persica HOM05D005448 ORTHO05D006405 2.6e-26 123.6 119 55.5
Atru.chr12.1057 Acer truncatum HOM05D005448 ORTHO05D006405 3.4e-26 123.2 119 59.7
Rhsim12G0151600 Rhododendron simsii HOM05D005448 ORTHO05D006405 3.4e-26 123.2 117 56.4
MBI17_g24520_MAGBIO Magnolia biondii HOM05D005448 ORTHO05D006405 5.9e-26 122.5 141 46.8
ECA246G3555 Erigeron canadensis HOM05D005448 ORTHO05D006405 7.7e-26 122.1 119 56.3
CANSAT11G2386 Cannabis sativa HOM05D005448 ORTHO05D006405 1.0e-25 121.7 119 54.6
Nitab4.5_0001688g0100 Nicotiana tabacum HOM05D005448 ORTHO05D006405 1.3e-25 121.3 120 53.3
TAR636G2978 Trochodendron aralioides HOM05D005448 ORTHO05D006405 1.3e-25 121.3 125 49.6
BcaC02g07836 Brassica carinata HOM05D005448 ORTHO05D006405 1.7e-25 120.9 119 58.0
RcHm_v2.0_Chr7g0182771 Rosa chinensis HOM05D005448 ORTHO05D006405 1.7e-25 120.9 118 55.9
PGSC0003DMG400033055 Solanum tuberosum HOM05D005448 ORTHO05D006405 1.7e-25 120.9 119 52.9
Lj5A104G41 Lonicera japonica HOM05D005448 ORTHO05D006405 2.2e-25 120.6 119 51.3
SGA_v2.0_scaffold313G48306 Striga asiatica HOM05D005448 ORTHO05D006405 2.2e-25 120.6 130 51.5
HanXRQChr05g0157251 Helianthus annuus HOM05D005448 ORTHO05D006405 5.0e-25 119.4 141 51.8
MD17G1029400 Malus domestica HOM05D005448 ORTHO05D006405 5.0e-25 119.4 118 55.1
AL5G40680 Arabidopsis lyrata HOM05D005448 ORTHO05D006405 6.5e-25 119.0 127 59.8
AL6G22380 Arabidopsis lyrata HOM05D005448 ORTHO05D006405 6.5e-25 119.0 127 59.8
CsaV3_6G039380 Cucumis sativus L. HOM05D005448 ORTHO05D006405 6.5e-25 119.0 152 49.3
Cc04_g16850 Coffea canephora HOM05D005448 ORTHO05D006405 8.5e-25 118.6 130 49.2
MD14G1210300 Malus domestica HOM05D005448 ORTHO05D006405 8.5e-25 118.6 118 52.5
Cc04_g13190 Coffea canephora HOM05D005448 ORTHO05D006405 1.4e-24 117.9 130 49.2
RcHm_v2.0_Chr4g0399581 Rosa chinensis HOM05D005448 ORTHO05D006405 1.9e-24 117.5 118 55.9
Ciclev10020839m.g Citrus clementina HOM05D005448 ORTHO05D006405 2.5e-24 117.1 137 50.4
MELO3C014255.2 Cucumis melo HOM05D005448 ORTHO05D006405 3.2e-24 116.7 152 48.7
Migut.E01012 Erythranthe guttata HOM05D005448 ORTHO05D006405 4.2e-24 116.3 119 50.4
Lalb_Chr07g0178271 Lupinus albus HOM05D005448 ORTHO05D006405 7.2e-24 115.5 119 52.9
CANSAT01G1259 Cannabis sativa HOM05D005448 ORTHO05D006405 1.6e-23 114.4 137 48.2
FvH4_5g14050 Fragaria vesca HOM05D005448 ORTHO05D006405 2.1e-23 114.0 118 51.7
FAN13G0193 Fragaria x ananassa HOM05D005448 ORTHO05D006405 2.1e-23 114.0 118 51.7
FAN18G0267 Fragaria x ananassa HOM05D005448 ORTHO05D006405 2.1e-23 114.0 118 51.7
Peaxi162Scf00013g00627 Petunia axillaris HOM05D005448 ORTHO05D006405 2.7e-23 113.6 117 52.1
MSTRG.11359 Avicennia marina HOM05D005448 ORTHO05D006405 6.1e-23 112.5 119 48.7
Medtr4g109400 Medicago truncatula HOM05D005448 ORTHO05D006405 6.1e-23 112.5 119 52.1
Aqoxy3G03610 Aquilegia oxysepala HOM05D005448 ORTHO05D006405 7.9e-23 112.1 129 48.8
Ca_21785_v3 Cicer arietinum L. HOM05D005448 ORTHO05D006405 7.9e-23 112.1 123 51.2
TPR.G2023 Trifolium pratense HOM05D005448 ORTHO05D006405 1.0e-22 111.7 119 51.3
Hund02597 Selenicereus undatus HOM05D005448 ORTHO05D006405 1.8e-22 110.9 145 45.5
FAN08G1797 Fragaria x ananassa HOM05D005448 ORTHO05D006405 3.0e-22 110.2 118 50.0
Glyma.05G022400 Glycine max HOM05D005448 ORTHO05D006405 3.9e-22 109.8 122 49.2
SHI27027 Sapria himalayana HOM05D005448 ORTHO05D006405 3.9e-22 109.8 119 48.7
AUR62008511 Chenopodium quinoa HOM05D005448 ORTHO05D006405 5.1e-22 109.4 118 50.8
Nn3g17421 Nelumbo nucifera HOM05D005448 ORTHO05D006405 5.1e-22 109.4 119 48.7
Nitab4.5_0000361g0060 Nicotiana tabacum HOM05D005448 ORTHO05D006405 8.8e-22 108.6 142 45.1
Sc25g0001780 Simmondsia chinensis HOM05D005448 ORTHO05D006405 8.8e-22 108.6 119 51.3
Lj4g0022538 Lotus japonicus HOM05D005448 ORTHO05D006405 2.0e-21 107.5 121 51.2
Psat4g047920 Pisum sativum HOM05D005448 ORTHO05D006405 7.4e-21 105.5 122 49.2
Os03g0213200 Oryza sativa ssp. japonica HOM05D005448 ORTHO05D006405 1.8e-19 100.9 119 42.9
Phvul.003G185700 Phaseolus vulgaris HOM05D005448 ORTHO05D006405 4.1e-19 99.8 122 47.5
DCAR_024881 Daucus carota HOM05D005448 ORTHO05D006405 5.3e-19 99.4 116 44.8
PSO541G3212 Papaver somniferum HOM05D005448 ORTHO05D006405 5.3e-19 99.4 118 43.2
ATR0064G115 Amborella trichopoda HOM05D005448 ORTHO05D006405 6.9e-19 99.0 118 43.2
CSS0038496 Camellia sinensis var. sinensis HOM05D005448 ORTHO05D006405 1.5e-18 97.8 118 49.2
TWI53G0232 Tripterygium wilfordii HOM05D005448 ORTHO05D006405 3.4e-18 96.7 129 41.1
AUR62021579 Chenopodium quinoa HOM05D005448 ORTHO05D006405 2.5e-16 90.5 117 42.7
Zm00001eb400320 Zea mays HOM05D005448 ORTHO05D006405 4.2e-16 89.7 118 41.5
HPP92_004716 Vanilla planifolia HOM05D005448 ORTHO05D006405 5.5e-16 89.4 116 41.4
Sed0024402 Sechium edule HOM05D005448 ORTHO05D006405 1.2e-15 88.2 130 46.9
TWI73G0142 Tripterygium wilfordii HOM05D005448 ORTHO05D006405 1.6e-15 87.8 119 42.9
A04p25650 Brassica napus HOM05D005448 ORTHO05D006405 2.1e-15 87.4 67 68.7
BraA04t18069Z Brassica rapa HOM05D005448 ORTHO05D006405 2.1e-15 87.4 67 68.7
arahy.Tifrunner.gnm1.ann1.6AQ98N Arachis hypogaea HOM05D005448 ORTHO05D006405 3.6e-15 86.7 123 44.7
arahy.Tifrunner.gnm1.ann1.VF11UZ Arachis hypogaea HOM05D005448 ORTHO05D006405 4.7e-15 86.3 123 44.7
Zm00001eb400290 Zea mays HOM05D005448 ORTHO05D006405 7.9e-15 85.5 119 39.5
Lsat_1_v5_gn_5_23221 Lactuca sativa HOM05D005448 ORTHO05D006405 1.8e-14 84.3 137 39.4
Prupe.1G213800 Prunus persica HOM05D005448 ORTHO05D006405 1.8e-14 84.3 90 50.0
vmacro16506 Vaccinium macrocarpon HOM05D005448 ORTHO05D006405 3.9e-14 83.2 161 36.6
PSO675G8542 Papaver somniferum HOM05D005448 ORTHO05D006405 5.2e-14 82.8 125 39.2
ClCG04G008840 Citrullus lanatus HOM05D005448 ORTHO05D006405 9.7e-13 78.6 152 40.8
Ah.02g113960 Amaranthus hybridus HOM05D005448 ORTHO05D006405 2.4e-11 73.9 143 35.0
unitig_22.g5417 Utricularia gibba HOM05D005448 ORTHO05D006405 2.4e-11 73.9 129 38.0
VMungo1215G2784 Vigna mungo HOM05D005448 ORTHO05D006405 2.6e-10 70.5 79 46.8
Mapoly0011s0155 Marchantia polymorpha HOM05D005448 ORTHO05D006405 5.9e-10 69.3 112 36.6
DCAR_011598 Daucus carota HOM05D005448 ORTHO05D006405 8.5e-09 65.5 97 41.2
Pp3c17_6410 Physcomitrium patens HOM05D005448 ORTHO05D006405 3.2e-08 63.5 113 37.2
SMO356G0523 Selaginella moellendorffii HOM05D005448 ORTHO05D006405 1.2e-07 61.6 117 31.6
SEGI_17550 Sequoiadendron giganteum HOM05D005448 ORTHO05D006405 1.6e-07 61.2 99 37.4
FvH4_5g14150 Fragaria vesca HOM05D005448 ORTHO05D006405 3.0e-06 57.0 62 43.5


User provided reference genes

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