Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G44940 Arabidopsis lyrata HOM05D037762 ORTHO05D014024 1.2e-90 336.7 198 100.0
AL8G18000 Arabidopsis lyrata HOM05D037762 ORTHO05D014024 1.2e-90 336.7 198 100.0
AL6G38430 Arabidopsis lyrata HOM05D037762 ORTHO05D014024 1.3e-71 273.5 179 94.4
Sp7g17290 Schrenkiella parvula HOM05D007047 ORTHO05D009177 9.4e-14 81.3 173 37.6
CARHR223430 Cardamine hirsuta HOM05D007047 ORTHO05D009177 2.6e-11 73.2 167 36.5
AL7G37840 Arabidopsis lyrata HOM05D007047 ORTHO05D009177 1.1e-09 67.8 117 35.9
Carub.0007s2455 Capsella rubella HOM05D007047 ORTHO05D009177 7.0e-09 65.1 104 46.2
AL7G17430 Arabidopsis lyrata HOM05D011963 ORTHO05D014024 2.7e-08 63.2 108 38.0
Aa31LG2G12990 Aethionema arabicum HOM05D007047 ORTHO05D009177 5.9e-08 62.0 169 33.7
AL1G61230 Arabidopsis lyrata HOM05D011963 ORTHO05D014024 5.9e-08 62.0 108 37.0
AL7G40700 Arabidopsis lyrata HOM05D011963 ORTHO05D014024 5.9e-08 62.0 108 37.0
THA.LOC104807915 Tarenaya hassleriana HOM05D007047 ORTHO05D009177 1.3e-07 60.8 66 51.5
AL3G45520 Arabidopsis lyrata HOM05D011963 ORTHO05D080317 2.3e-07 60.1 76 43.4
AL5G33480 Arabidopsis lyrata HOM05D011963 ORTHO05D014024 8.6e-07 58.2 102 38.2
AT3G33528 Arabidopsis thaliana HOM05D011963 ORTHO05D014024 8.6e-07 58.2 95 36.8
Gohir.D08G185400 Gossypium hirsutum HOM05D007047 ORTHO05D009177 8.6e-07 58.2 58 50.0
Gorai.004G194800 Gossypium raimondii HOM05D007047 ORTHO05D009177 8.6e-07 58.2 58 50.0
Gohir.A08G166600 Gossypium hirsutum HOM05D007047 ORTHO05D009177 1.1e-06 57.8 58 48.3
AL6G53270 Arabidopsis lyrata HOM05D011963 ORTHO05D014024 1.9e-06 57.0 101 38.6
AL8G30870 Arabidopsis lyrata HOM05D000701 ORTHO05D014024 1.9e-06 57.0 193 29.5
CiPaw.12G048400 Carya illinoinensis HOM05D007047 ORTHO05D009177 1.9e-06 57.0 39 69.2
Thhalv10027153m.g Eutrema salsugineum HOM05D007047 ORTHO05D009177 1.9e-06 57.0 118 35.6
Aqoxy3G02722 Aquilegia oxysepala HOM05D007047 ORTHO05D009177 4.3e-06 55.8 58 48.3
Thecc.03G244500 Theobroma cacao HOM05D007047 ORTHO05D009177 5.6e-06 55.5 53 47.2
Actinidia31505 Actinidia chinensis HOM05D007047 ORTHO05D006202 7.3e-06 55.1 39 64.1
AL7G43230 Arabidopsis lyrata HOM05D011963 ORTHO05D014024 9.5e-06 54.7 103 37.9
SGA_v2.0_scaffold104G30204 Striga asiatica HOM05D007047 ORTHO05D009177 9.5e-06 54.7 43 60.5


User provided reference genes

Program Settings