Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G44330 Arabidopsis lyrata HOM05D011356 ORTHO05D013405 1.3e-96 356.3 168 100.0
BcaC08g43708 Brassica carinata HOM05D011356 ORTHO05D013405 2.6e-89 332.0 175 92.0
Aa31csc553G60 Aethionema arabicum HOM05D011356 ORTHO05D013405 1.8e-58 229.6 112 98.2
C06p01590 Brassica napus HOM05D011356 ORTHO05D013405 3.0e-37 159.1 80 95.0
Cfa023043 Carpinus fangiana HOM05D011356 ORTHO05D013405 6.7e-37 157.9 83 94.0
BolC6t35290H Brassica oleracea HOM05D011356 ORTHO05D013405 2.6e-36 156.0 80 93.8
Psat0s1330g0400 Pisum sativum HOM05D008580 ORTHO05D010833 2.0e-20 103.2 66 78.8
SGA_v2.0_scaffold245G44598 Striga asiatica HOM05D011356 ORTHO05D013405 5.9e-17 91.7 56 78.6
Sopen06g007640 Solanum pennellii HOM05D002965 ORTHO05D012151 2.3e-16 89.7 55 81.8
BcaC02g10872 Brassica carinata HOM05D011356 ORTHO05D013405 1.9e-15 86.7 51 84.3
SHI51228 Sapria himalayana HOM05D001325 ORTHO05D001540 1.9e-15 86.7 52 84.6
BolC7t45962H Brassica oleracea HOM05D011356 ORTHO05D013405 2.1e-14 83.2 47 89.4
BcaC05g26879 Brassica carinata HOM05D011356 ORTHO05D013405 2.8e-14 82.8 112 51.8
Gorai.001G166400 Gossypium raimondii HOM05D011356 ORTHO05D013405 1.2e-12 77.4 36 94.4
GSVIVG01002725001 Vitis vinifera HOM05D011356 ORTHO05D013405 3.4e-12 75.9 36 94.4
BcaC05g26877 Brassica carinata HOM05D008580 ORTHO05D010833 7.5e-12 74.7 96 51.0
C07p54730 Brassica napus HOM05D011356 ORTHO05D013405 2.9e-11 72.8 38 86.8
ClCG00G002380 Citrullus lanatus HOM05D008622 ORTHO05D010757 5.9e-09 65.1 81 49.4
Gohir.A08G104150 Gossypium hirsutum HOM05D011356 ORTHO05D013405 1.0e-08 64.3 31 90.3
Solyc12g036710.3 Solanum lycopersicum HOM05D011356 ORTHO05D013405 3.0e-08 62.8 46 67.4
A07p18180 Brassica napus HOM05D011356 ORTHO05D013405 3.9e-08 62.4 53 64.2
SHI46915 Sapria himalayana HOM05D003467 ORTHO05D004220 1.9e-07 60.1 73 50.7
BcaC04g22518 Brassica carinata HOM05D005196 ORTHO05D006107 4.3e-07 58.9 47 63.8


User provided reference genes

Program Settings