Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 1.8e-45 185.7 99 100.0
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 2.0e-44 182.2 99 98.0
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 3.7e-43 177.9 99 93.9
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 3.8e-40 167.9 98 88.8
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 5.5e-39 164.1 99 89.9
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 3.0e-37 158.3 99 83.8
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 6.8e-37 157.1 98 83.7
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 6.8e-37 157.1 98 83.7
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 1.2e-36 156.4 98 81.6
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 1.5e-36 156.0 98 80.6
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 2.0e-36 155.6 98 82.7
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 2.6e-36 155.2 99 80.8
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 2.6e-36 155.2 99 80.8
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 3.4e-36 154.8 98 82.7
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 3.4e-36 154.8 99 79.8
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 3.4e-36 154.8 98 81.6
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 4.4e-36 154.5 99 81.8
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 4.4e-36 154.5 98 79.6
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 4.4e-36 154.5 98 79.6
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 4.4e-36 154.5 98 80.6
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 5.7e-36 154.1 99 78.8
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 7.5e-36 153.7 98 78.6
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 9.8e-36 153.3 99 81.8
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 1.3e-35 152.9 98 79.6
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 1.3e-35 152.9 99 84.8
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 1.3e-35 152.9 98 78.6
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 1.7e-35 152.5 99 80.8
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 2.2e-35 152.1 98 79.6
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 3.7e-35 151.4 98 80.6
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 4.9e-35 151.0 98 78.6
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 6.3e-35 150.6 98 79.6
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 8.3e-35 150.2 142 63.4
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 8.3e-35 150.2 98 78.6
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 8.3e-35 150.2 98 76.5
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 1.1e-34 149.8 99 78.8
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 1.1e-34 149.8 99 76.8
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 1.4e-34 149.4 98 78.6
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.8e-34 149.1 99 78.8
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 1.8e-34 149.1 107 76.6
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 1.8e-34 149.1 99 82.8
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 2.4e-34 148.7 99 75.8
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 3.1e-34 148.3 99 81.8
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 3.1e-34 148.3 99 81.8
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 3.1e-34 148.3 98 78.6
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 4.1e-34 147.9 98 76.5
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 7.0e-34 147.1 98 76.5
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 7.0e-34 147.1 98 76.5
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 7.0e-34 147.1 98 76.5
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 1.2e-33 146.4 99 75.8
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 1.2e-33 146.4 98 76.5
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 1.2e-33 146.4 92 80.4
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 1.2e-33 146.4 101 77.2
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 1.2e-33 146.4 98 76.5
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 1.6e-33 146.0 98 71.4
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 2.0e-33 145.6 97 78.4
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 3.5e-33 144.8 98 76.5
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 3.5e-33 144.8 96 77.1
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 3.5e-33 144.8 96 77.1
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 5.9e-33 144.1 98 74.5
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 7.8e-33 143.7 99 76.8
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 7.8e-33 143.7 99 76.8
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 7.8e-33 143.7 98 75.5
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 1.0e-32 143.3 98 74.5
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 1.7e-32 142.5 98 74.5
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 2.3e-32 142.1 99 73.7
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 2.9e-32 141.7 99 73.7
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 5.0e-32 141.0 100 74.0
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 6.6e-32 140.6 89 82.0
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 1.9e-31 139.0 98 77.6
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 2.5e-31 138.7 96 72.9
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 2.5e-31 138.7 98 70.4
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 7.3e-31 137.1 97 70.1
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 9.5e-31 136.7 96 71.9
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 9.5e-31 136.7 99 70.7
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 9.5e-31 136.7 99 69.7
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 9.5e-31 136.7 99 69.7
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 1.2e-30 136.3 96 76.0
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 1.2e-30 136.3 88 79.5
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 1.6e-30 136.0 132 61.4
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 2.1e-30 135.6 99 68.7
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 2.1e-30 135.6 99 68.7
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 2.1e-30 135.6 98 69.4
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 3.6e-30 134.8 105 71.4
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 3.6e-30 134.8 98 70.4
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 4.7e-30 134.4 95 71.6
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 8.0e-30 133.7 98 68.4
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 1.0e-29 133.3 98 68.4
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 1.4e-29 132.9 97 68.0
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 1.4e-29 132.9 98 72.4
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 1.8e-29 132.5 98 70.4
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 1.8e-29 132.5 98 67.3
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 2.3e-29 132.1 99 66.7
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 6.8e-29 130.6 98 66.3
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 8.9e-29 130.2 95 68.4
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 1.5e-28 129.4 98 68.4
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 1.3e-27 126.3 89 75.3
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 2.2e-27 125.6 95 73.7
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 8.3e-27 123.6 98 69.4
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 3.9e-24 114.8 86 72.1
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 1.9e-23 112.5 98 58.2
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 4.7e-22 107.8 98 53.1
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 4.7e-22 107.8 98 56.1
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 1.1e-21 106.7 62 87.1
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 3.4e-20 101.7 64 85.9
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 4.9e-19 97.8 65 81.5
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 6.4e-19 97.4 74 68.9
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 6.4e-19 97.4 98 51.0
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.1e-18 96.7 62 80.6
BolC9t56988H Brassica oleracea HOM05D006291 ORTHO05D007669 1.4e-18 96.3 62 82.3
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 1.4e-18 96.3 66 72.7
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 1.9e-18 95.9 64 78.1
SalBow3G3584 Salvia bowleyana HOM05D006291 ORTHO05D007669 1.9e-18 95.9 99 57.6
C09p41100 Brassica napus HOM05D006291 ORTHO05D007669 7.0e-18 94.0 63 79.4
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 2.7e-17 92.0 62 75.8
Cpa.g.sc91.61 Carica papaya HOM05D006291 ORTHO05D007669 4.0e-13 78.2 53 79.2
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 7.1e-10 67.4 32 96.9
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 9.2e-10 67.0 42 73.8
PRCOL_00006384 Prasinoderma coloniale HOM05D006291 ORTHO05D007669 2.1e-09 65.9 89 38.2
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 4.6e-09 64.7 32 93.8
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 3.3e-07 58.5 38 76.3
Haze_19088 Corylus avellana HOM05D000287 ORTHO05D000319 1.2e-06 56.6 41 68.3
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 2.1e-06 55.8 33 69.7
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 2.1e-06 55.8 32 75.0
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 3.6e-06 55.1 32 78.1
MCO11G208 Micromonas commoda HOM05D006291 ORTHO05D007669 3.6e-06 55.1 88 34.1


User provided reference genes

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