Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G43870 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 7.9e-52 206.8 105 100.0
AL6G45690 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 5.7e-50 200.7 105 98.1
A06p45730 Brassica napus HOM05D004230 ORTHO05D007976 2.6e-26 122.1 79 70.9
AL5G20550 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 3.7e-25 118.2 76 72.4
AT3G42870 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 1.4e-24 116.3 77 71.4
AT1G43720 Arabidopsis thaliana HOM05D004230 ORTHO05D018474 2.4e-24 115.5 78 69.2
BraA03t13046Z Brassica rapa HOM05D004230 ORTHO05D007976 1.0e-22 110.2 79 67.1
BraA06t25864Z Brassica rapa HOM05D004230 ORTHO05D018474 2.9e-22 108.6 69 71.0
BraA05t21003Z Brassica rapa HOM05D004230 ORTHO05D041249 3.8e-22 108.2 79 64.6
BraA06t26555Z Brassica rapa HOM05D004230 ORTHO05D007976 4.2e-21 104.8 63 73.0
BolC2t12231H Brassica oleracea HOM05D004230 ORTHO05D018474 9.4e-21 103.6 76 63.2
BcaB07g32504 Brassica carinata HOM05D004230 ORTHO05D007976 1.2e-20 103.2 79 62.0
Carub.0005s0823 Capsella rubella HOM05D004230 ORTHO05D007976 1.2e-20 103.2 77 63.6
BcaB05g22709 Brassica carinata HOM05D004230 ORTHO05D007976 2.1e-20 102.4 112 51.8
BcaB06g27526 Brassica carinata HOM05D004230 ORTHO05D007976 3.0e-19 98.6 63 65.1
BcaC07g36911 Brassica carinata HOM05D004230 ORTHO05D007976 1.8e-16 89.4 77 50.6
BraA01t02220Z Brassica rapa HOM05D004230 ORTHO05D007976 1.8e-16 89.4 79 49.4
Sp4g02630 Schrenkiella parvula HOM05D004230 ORTHO05D007976 1.8e-16 89.4 62 64.5
BcaC05g28343 Brassica carinata HOM05D004230 ORTHO05D007976 4.1e-16 88.2 79 50.6
BcaC03g16826 Brassica carinata HOM05D004230 ORTHO05D007976 7.0e-16 87.4 79 48.1
C05p46300 Brassica napus HOM05D004230 ORTHO05D007976 7.0e-16 87.4 79 48.1
BolC3t20713H Brassica oleracea HOM05D004230 ORTHO05D007976 7.0e-16 87.4 79 48.1
AT3G30520 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 1.2e-15 86.7 54 72.2
BcaB01g00472 Brassica carinata HOM05D004230 ORTHO05D007976 1.2e-15 86.7 79 48.1
BolC8t50322H Brassica oleracea HOM05D004230 ORTHO05D007976 1.2e-15 86.7 79 48.1
BcaB05g23135 Brassica carinata HOM05D004230 ORTHO05D007976 2.0e-15 85.9 79 46.8
C03p27690 Brassica napus HOM05D004230 ORTHO05D007976 2.0e-15 85.9 79 46.8
BcaC02g09042 Brassica carinata HOM05D004230 ORTHO05D007976 2.7e-15 85.5 79 48.1
C07p48530 Brassica napus HOM05D004230 ORTHO05D007976 2.7e-15 85.5 79 46.8
C07p53510 Brassica napus HOM05D004230 ORTHO05D027608 2.7e-15 85.5 79 46.8
BolC7t45361H Brassica oleracea HOM05D004230 ORTHO05D007976 2.7e-15 85.5 79 46.8
A06p33140 Brassica napus HOM05D004230 ORTHO05D007976 3.5e-15 85.1 79 48.1
BolC3t17228H Brassica oleracea HOM05D004230 ORTHO05D007976 3.5e-15 85.1 79 48.1
BcaC07g39750 Brassica carinata HOM05D004230 ORTHO05D027608 4.5e-15 84.7 79 46.8
BcaC08g43996 Brassica carinata HOM05D004230 ORTHO05D007976 4.5e-15 84.7 79 49.4
BcaC09g49286 Brassica carinata HOM05D004230 ORTHO05D007976 4.5e-15 84.7 79 45.6
C06p14020 Brassica napus HOM05D004230 ORTHO05D007976 4.5e-15 84.7 79 49.4
C08p29240 Brassica napus HOM05D004230 ORTHO05D027608 4.5e-15 84.7 79 46.8
BolC8t50525H Brassica oleracea HOM05D004230 ORTHO05D027608 4.5e-15 84.7 79 46.8
C07p50550 Brassica napus HOM05D004230 ORTHO05D007976 7.7e-15 84.0 79 46.8
BolC3t17847H Brassica oleracea HOM05D004230 ORTHO05D007976 7.7e-15 84.0 79 46.8
C05p44100 Brassica napus HOM05D004230 ORTHO05D007976 1.0e-14 83.6 79 46.8
BolC6t36485H Brassica oleracea HOM05D004230 ORTHO05D007976 2.2e-14 82.4 79 45.6
BcaC03g15070 Brassica carinata HOM05D004230 ORTHO05D007976 3.8e-14 81.6 79 46.8
BolC2t08696H Brassica oleracea HOM05D004230 ORTHO05D007976 3.8e-14 81.6 79 46.8
BolC5t33360H Brassica oleracea HOM05D004230 ORTHO05D007976 3.8e-14 81.6 79 44.3
BcaB04g18000 Brassica carinata HOM05D004230 ORTHO05D007976 1.2e-12 76.6 79 45.6
AL7G46530 Arabidopsis lyrata HOM05D004230 ORTHO05D007976 4.7e-12 74.7 70 48.6
AT3G32904 Arabidopsis thaliana HOM05D004230 ORTHO05D007976 2.3e-11 72.4 71 45.1
BolC3t20706H Brassica oleracea HOM05D004230 ORTHO05D007976 2.3e-11 72.4 41 70.7
BcaC01g03708 Brassica carinata HOM05D004230 ORTHO05D007976 7.5e-10 67.4 50 58.0
BcaC06g34422 Brassica carinata HOM05D004230 ORTHO05D007976 9.8e-10 67.0 79 49.4
C05p40190 Brassica napus HOM05D004230 ORTHO05D007976 2.2e-09 65.9 43 65.1
BolC5t32761H Brassica oleracea HOM05D004230 ORTHO05D007976 2.2e-09 65.9 43 65.1
BraA06t26246Z Brassica rapa HOM05D004230 ORTHO05D042725 4.1e-08 61.6 60 48.3
BcaC05g25838 Brassica carinata HOM05D004230 ORTHO05D007976 5.4e-08 61.2 74 45.9
BcaC05g28003 Brassica carinata HOM05D004230 ORTHO05D007976 1.6e-07 59.7 79 41.8
C08p27080 Brassica napus HOM05D004230 ORTHO05D042725 1.6e-07 59.7 58 50.0
Sp1g33580 Schrenkiella parvula HOM05D004230 ORTHO05D007976 2.0e-07 59.3 75 38.7
BolC7t42083H Brassica oleracea HOM05D004230 ORTHO05D007976 1.0e-06 57.0 73 42.5
C04p25730 Brassica napus HOM05D030526 ORTHO05D028078 1.3e-06 56.6 38 55.3
BolC4t24235H Brassica oleracea HOM05D030526 ORTHO05D028078 1.3e-06 56.6 38 55.3
BraA06t27442Z Brassica rapa HOM05D004230 ORTHO05D007976 2.9e-06 55.5 41 65.9
C07p28690 Brassica napus HOM05D004230 ORTHO05D007976 5.0e-06 54.7 41 65.9
BolC7t43407H Brassica oleracea HOM05D004230 ORTHO05D007976 5.0e-06 54.7 41 65.9
BolC2t08058H Brassica oleracea HOM05D004230 ORTHO05D007976 6.6e-06 54.3 66 42.4
Carub.0007s3044 Capsella rubella HOM05D004230 ORTHO05D007976 6.6e-06 54.3 45 53.3
BcaC01g02567 Brassica carinata HOM05D004230 ORTHO05D018474 8.6e-06 53.9 35 60.0
C07p15900 Brassica napus HOM05D004230 ORTHO05D007976 8.6e-06 53.9 73 41.1
BolC3t18593H Brassica oleracea HOM05D004230 ORTHO05D018474 8.6e-06 53.9 35 60.0


User provided reference genes

Program Settings