Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G43490 Arabidopsis lyrata HOM05D004372 ORTHO05D004331 7.2e-33 143.3 70 100.0
AL8G23740 Arabidopsis lyrata HOM05D004372 ORTHO05D004331 7.9e-32 139.8 69 97.1
Carub.0006s0106 Capsella rubella HOM05D004372 ORTHO05D004331 3.0e-23 111.3 66 78.8
A10p33400 Brassica napus HOM05D004372 ORTHO05D004331 4.4e-22 107.5 65 78.5
BolC9t60164H Brassica oleracea HOM05D004372 ORTHO05D004331 4.4e-22 107.5 65 78.5
C09p74310 Brassica napus HOM05D004372 ORTHO05D004331 5.7e-22 107.1 65 78.5
AL6G11450 Arabidopsis lyrata HOM05D004372 ORTHO05D004331 2.0e-19 98.6 66 72.7
AT5G02220 Arabidopsis thaliana HOM05D004372 ORTHO05D004331 2.6e-19 98.2 66 72.7
THA.LOC109116790 Tarenaya hassleriana HOM05D004372 ORTHO05D004331 3.4e-19 97.8 66 74.2
CARHR211160 Cardamine hirsuta HOM05D004372 ORTHO05D004331 2.2e-18 95.1 66 68.2
Sp6g40230 Schrenkiella parvula HOM05D004372 ORTHO05D004331 2.9e-18 94.7 66 69.7
BraA10t45371Z Brassica rapa HOM05D004372 ORTHO05D004331 1.1e-17 92.8 65 69.2
BraA02t04711Z Brassica rapa HOM05D004372 ORTHO05D004331 5.2e-15 84.0 54 72.2
BolC2t06039H Brassica oleracea HOM05D004372 ORTHO05D004331 5.7e-14 80.5 57 64.9
BcaNung06028 Brassica carinata HOM05D004372 ORTHO05D004331 7.4e-14 80.1 57 64.9
C02p00390 Brassica napus HOM05D004372 ORTHO05D004331 7.4e-14 80.1 57 64.9
Thhalv10015202m.g Eutrema salsugineum HOM05D004372 ORTHO05D004331 8.2e-13 76.6 66 60.6
Cpa.g.c34680 Carica papaya HOM05D004372 ORTHO05D004331 3.1e-12 74.7 69 53.6
THA.LOC109117276 Tarenaya hassleriana HOM05D004372 ORTHO05D004331 4.1e-12 74.3 66 59.1
Nn2g13398 Nelumbo nucifera HOM05D004372 ORTHO05D004331 7.0e-12 73.6 66 54.5
Aa31LG1G22520 Aethionema arabicum HOM05D004372 ORTHO05D004331 5.9e-11 70.5 63 55.6
Nn2g11160 Nelumbo nucifera HOM05D004372 ORTHO05D004331 7.7e-11 70.1 69 53.6
Hma1.2p1_0936F.1_g238880 Hydrangea macrophylla HOM05D004372 ORTHO05D004331 2.9e-10 68.2 57 54.4
MBI05_g29695_MAGBIO Magnolia biondii HOM05D000093 ORTHO05D000814 1.5e-09 65.9 63 46.0
TAR623G0224 Trochodendron aralioides HOM05D004372 ORTHO05D004331 4.2e-09 64.3 51 56.9
Cfa017356 Carpinus fangiana HOM05D004372 ORTHO05D004331 5.5e-09 63.9 62 51.6
Gohir.D09G150300 Gossypium hirsutum HOM05D004372 ORTHO05D004331 5.5e-09 63.9 57 54.4
Gorai.006G171600 Gossypium raimondii HOM05D004372 ORTHO05D004331 5.5e-09 63.9 57 54.4
MD04G1131100 Malus domestica HOM05D004372 ORTHO05D004331 5.5e-09 63.9 56 53.6
Haze_20817 Corylus avellana HOM05D004372 ORTHO05D004331 7.2e-09 63.5 62 51.6
TAR633G2336 Trochodendron aralioides HOM05D004372 ORTHO05D004331 1.2e-08 62.8 63 46.0
Gohir.A09G154800 Gossypium hirsutum HOM05D004372 ORTHO05D004331 1.6e-08 62.4 56 53.6
TAR636G3128 Trochodendron aralioides HOM05D004372 ORTHO05D004331 4.7e-08 60.8 63 42.9
Manes.09G092400 Manihot esculenta HOM05D004372 ORTHO05D004331 1.4e-07 59.3 67 44.8
Gorai.012G104900 Gossypium raimondii HOM05D004372 ORTHO05D004331 1.8e-07 58.9 51 54.9
Rhsim04G0158600 Rhododendron simsii HOM05D004372 ORTHO05D004331 1.8e-07 58.9 51 52.9
CANSAT11G2039 Cannabis sativa HOM05D004372 ORTHO05D004331 3.0e-07 58.2 64 48.4
Hma1.2p1_1889F.1_g306650 Hydrangea macrophylla HOM05D004372 ORTHO05D004331 3.0e-07 58.2 62 48.4
Hma1.2p1_2197F.1_g316913 Hydrangea macrophylla HOM05D004372 ORTHO05D004331 3.0e-07 58.2 62 48.4
RcHm_v2.0_Chr3g0466321 Rosa chinensis HOM05D004372 ORTHO05D004331 4.0e-07 57.8 59 47.5
ClCG07G003460 Citrullus lanatus HOM05D004372 ORTHO05D004331 6.7e-07 57.0 63 46.0
Eucgr.J01238 Eucalyptus grandis HOM05D004372 ORTHO05D004331 1.2e-06 56.2 56 48.2
FAN02G2532 Fragaria x ananassa HOM05D004372 ORTHO05D004331 1.2e-06 56.2 59 45.8
Gohir.D04G122000 Gossypium hirsutum HOM05D004372 ORTHO05D004331 1.5e-06 55.8 51 52.9
MBI14_g04662_MAGBIO Magnolia biondii HOM05D004372 ORTHO05D004331 1.5e-06 55.8 64 43.8
MD12G1144200 Malus domestica HOM05D004372 ORTHO05D004331 1.5e-06 55.8 56 48.2
Cfa001453 Carpinus fangiana HOM05D004372 ORTHO05D004331 2.0e-06 55.5 62 45.2
MELO3C023871.2 Cucumis melo HOM05D004372 ORTHO05D004331 2.0e-06 55.5 54 46.3
Atru.chr12.419 Acer truncatum HOM05D004372 ORTHO05D004331 2.6e-06 55.1 60 45.0
CiPaw.09G194900 Carya illinoinensis HOM05D004372 ORTHO05D004331 2.6e-06 55.1 64 45.3
FAN05G2794 Fragaria x ananassa HOM05D004372 ORTHO05D004331 3.3e-06 54.7 59 45.8
HanXRQChr08g0220931 Helianthus annuus HOM05D004372 ORTHO05D004331 4.4e-06 54.3 55 47.3
MELO3C003142.2 Cucumis melo HOM05D004372 ORTHO05D004331 5.7e-06 53.9 63 41.3
CsaV3_4G025140 Cucumis sativus L. HOM05D004372 ORTHO05D004331 5.7e-06 53.9 63 42.9
FAN09G4335 Fragaria x ananassa HOM05D004372 ORTHO05D004331 5.7e-06 53.9 59 45.8
ClCG10G021220 Citrullus lanatus HOM05D004372 ORTHO05D004331 7.5e-06 53.5 56 46.4
Haze_17088 Corylus avellana HOM05D004372 ORTHO05D004331 7.5e-06 53.5 55 41.8
Manes.07G117700 Manihot esculenta HOM05D004372 ORTHO05D004331 7.5e-06 53.5 58 41.4
Thecc.05G037100 Theobroma cacao HOM05D004372 ORTHO05D004331 7.5e-06 53.5 55 47.3
FvH4_6g13440 Fragaria vesca HOM05D004372 ORTHO05D004331 9.7e-06 53.1 59 45.8
FAN14G0518 Fragaria x ananassa HOM05D004372 ORTHO05D004331 9.7e-06 53.1 59 45.8
Prupe.6G257600 Prunus persica HOM05D004372 ORTHO05D004331 9.7e-06 53.1 56 44.6
Sed0017148 Sechium edule HOM05D004372 ORTHO05D004331 9.7e-06 53.1 56 46.4
PGSC0003DMG400027224 Solanum tuberosum HOM05D004372 ORTHO05D004331 9.7e-06 53.1 57 45.6


User provided reference genes

Program Settings