Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G42950 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 3.1e-36 155.6 154 100.0
AT2G05520 Arabidopsis thaliana HOM05D008158 ORTHO05D010323 1.3e-23 113.6 154 83.8
AL3G42960 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 1.4e-20 103.6 154 64.9
A03p44630 Brassica napus HOM05D008158 ORTHO05D010323 2.0e-19 99.8 155 70.3
AL3G42860 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 5.8e-19 98.2 154 63.0
Thhalv10017460m.g Eutrema salsugineum HOM05D008158 ORTHO05D010323 5.8e-19 98.2 157 57.3
BraA03t13598Z Brassica rapa HOM05D008158 ORTHO05D010323 1.7e-18 96.7 155 70.3
AT2G05530 Arabidopsis thaliana HOM05D008158 ORTHO05D010323 2.2e-18 96.3 154 63.6
CARHR103210 Cardamine hirsuta HOM05D008158 ORTHO05D010323 4.9e-18 95.1 154 44.2
AT2G05380 Arabidopsis thaliana HOM05D008158 ORTHO05D010323 8.4e-18 94.4 154 59.7
C03p55460 Brassica napus HOM05D008158 ORTHO05D010323 8.4e-18 94.4 155 66.5
BolC3t17821H Brassica oleracea HOM05D008158 ORTHO05D010323 8.4e-18 94.4 155 66.5
BcaB08g34502 Brassica carinata HOM05D008158 ORTHO05D010323 1.9e-17 93.2 157 75.2
BcaC01g03160 Brassica carinata HOM05D008158 ORTHO05D010323 1.9e-17 93.2 155 51.6
Sp3g24030 Schrenkiella parvula HOM05D008158 ORTHO05D010323 1.6e-16 90.1 160 54.4
BraA04t17885Z Brassica rapa HOM05D008158 ORTHO05D010323 2.1e-16 89.7 156 59.0
A04p23590 Brassica napus HOM05D008158 ORTHO05D010323 4.6e-16 88.6 156 59.0
Sp3g24040 Schrenkiella parvula HOM05D008158 ORTHO05D010323 1.0e-15 87.4 154 71.4
Sp3g24050 Schrenkiella parvula HOM05D008158 ORTHO05D010323 1.3e-15 87.0 157 54.8
Carub.0003s2686 Capsella rubella HOM05D008158 ORTHO05D010323 3.0e-15 85.9 154 64.9
C04p60060 Brassica napus HOM05D008158 ORTHO05D010323 1.9e-14 83.2 156 59.0
BolC4t27509H Brassica oleracea HOM05D008158 ORTHO05D010323 1.9e-14 83.2 156 59.0
Carub.0003s2685 Capsella rubella HOM05D008158 ORTHO05D010323 2.1e-13 79.7 157 71.3
CARHR103220 Cardamine hirsuta HOM05D008158 ORTHO05D010323 1.8e-12 76.6 154 61.7
THA.LOC104826607 Tarenaya hassleriana HOM05D008158 ORTHO05D010323 3.1e-12 75.9 156 57.1
BcaB06g28391 Brassica carinata HOM05D008158 ORTHO05D010323 4.0e-12 75.5 156 57.1
BraA10t42972Z Brassica rapa HOM05D008158 ORTHO05D010323 6.9e-12 74.7 158 39.9
BraA03t13597Z Brassica rapa HOM05D008158 ORTHO05D010323 2.6e-11 72.8 155 66.5
A10p08930 Brassica napus HOM05D008158 ORTHO05D010323 4.5e-11 72.0 158 39.2
Aa31LG1G19090 Aethionema arabicum HOM05D008158 ORTHO05D010323 3.8e-10 68.9 154 63.0
Sp3g23960 Schrenkiella parvula HOM05D008158 ORTHO05D010323 1.4e-09 67.0 53 77.4
BcaC01g03162 Brassica carinata HOM05D008158 ORTHO05D010323 3.5e-08 62.4 53 73.6
BolC9t55330H Brassica oleracea HOM05D008158 ORTHO05D010323 3.5e-08 62.4 154 33.1
A07p06140 Brassica napus HOM05D008158 ORTHO05D010323 1.0e-07 60.8 49 71.4
AL3G42940 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 2.3e-07 59.7 49 71.4
Carub.0003s2679 Capsella rubella HOM05D008158 ORTHO05D010323 2.3e-07 59.7 154 35.1
THA.LOC104815348 Tarenaya hassleriana HOM05D008158 ORTHO05D010323 2.3e-07 59.7 28 82.1
CARHR103240 Cardamine hirsuta HOM05D008158 ORTHO05D010323 3.0e-07 59.3 156 44.9
C07p09670 Brassica napus HOM05D008158 ORTHO05D010323 3.9e-07 58.9 49 71.4
BolC7t41408H Brassica oleracea HOM05D008158 ORTHO05D010323 3.9e-07 58.9 49 71.4
Thhalv10002728m.g Eutrema salsugineum HOM05D008158 ORTHO05D010323 3.9e-07 58.9 29 86.2
C07p09690 Brassica napus HOM05D008158 ORTHO05D010323 5.1e-07 58.5 58 65.5
THA.LOC104826606 Tarenaya hassleriana HOM05D008158 ORTHO05D010323 6.7e-07 58.2 163 49.1
BcaB08g34503 Brassica carinata HOM05D008158 ORTHO05D010323 8.7e-07 57.8 157 54.1
AL3G42930 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 1.1e-06 57.4 47 74.5
BcaC01g03159 Brassica carinata HOM05D008158 ORTHO05D010323 1.1e-06 57.4 157 54.1
A03p44640 Brassica napus HOM05D008158 ORTHO05D010323 1.1e-06 57.4 157 54.1
C03p55470 Brassica napus HOM05D008158 ORTHO05D010323 1.1e-06 57.4 157 49.0
AL3G43030 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 1.5e-06 57.0 51 68.6
BcaC04g22045 Brassica carinata HOM05D008158 ORTHO05D010323 4.3e-06 55.5 31 71.0
Thhalv10002748m.g Eutrema salsugineum HOM05D008158 ORTHO05D010323 5.6e-06 55.1 57 63.2
AT2G05440 Arabidopsis thaliana HOM05D008158 ORTHO05D010323 7.4e-06 54.7 47 70.2
BolC3t17820H Brassica oleracea HOM05D008158 ORTHO05D010323 7.4e-06 54.7 49 71.4
Carub.0003s2684 Capsella rubella HOM05D008158 ORTHO05D010323 7.4e-06 54.7 52 67.3


User provided reference genes

Program Settings