Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G42930 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 1.2e-22 110.2 130 100.0
AT2G05440 Arabidopsis thaliana HOM05D008158 ORTHO05D010323 5.6e-15 84.7 60 95.0
AL3G42940 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 8.1e-14 80.9 47 93.6
AL3G43030 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 9.0e-13 77.4 131 77.1
Carub.0003s2682 Capsella rubella HOM05D008158 ORTHO05D010323 2.6e-12 75.9 48 89.6
Carub.0003s2683 Capsella rubella HOM05D008158 ORTHO05D010323 9.9e-12 73.9 44 90.9
AT2G05510 Arabidopsis thaliana HOM05D008158 ORTHO05D010323 1.7e-11 73.2 132 82.6
Thhalv10003123m.g Eutrema salsugineum HOM05D008158 ORTHO05D010323 3.5e-09 65.5 46 80.4
BcaB08g34501 Brassica carinata HOM05D008158 ORTHO05D010323 4.6e-09 65.1 49 77.6
Sp3g23960 Schrenkiella parvula HOM05D008158 ORTHO05D010323 7.8e-09 64.3 49 75.5
C03p55450 Brassica napus HOM05D008158 ORTHO05D010323 1.0e-08 63.9 49 75.5
A03p44620 Brassica napus HOM05D008158 ORTHO05D010323 1.3e-08 63.5 49 75.5
BraA03t13597Z Brassica rapa HOM05D008158 ORTHO05D010323 1.3e-08 63.5 49 75.5
CARHR103190 Cardamine hirsuta HOM05D008158 ORTHO05D010323 1.7e-08 63.2 48 77.1
BolC3t17820H Brassica oleracea HOM05D008158 ORTHO05D010323 5.1e-08 61.6 49 73.5
Carub.0003s2684 Capsella rubella HOM05D008158 ORTHO05D010323 5.1e-08 61.6 60 65.0
Sp3g24030 Schrenkiella parvula HOM05D008158 ORTHO05D010323 5.1e-08 61.6 46 76.1
BcaC01g03162 Brassica carinata HOM05D008158 ORTHO05D010323 6.6e-08 61.2 49 73.5
Sp3g24040 Schrenkiella parvula HOM05D008158 ORTHO05D010323 1.9e-07 59.7 48 75.0
CARHR103130 Cardamine hirsuta HOM05D008158 ORTHO05D010323 2.5e-07 59.3 47 74.5
Thhalv10017460m.g Eutrema salsugineum HOM05D008158 ORTHO05D010323 2.5e-07 59.3 48 77.1
Sp3g24050 Schrenkiella parvula HOM05D008158 ORTHO05D010323 2.5e-07 59.3 48 77.1
AT2G05530 Arabidopsis thaliana HOM05D008158 ORTHO05D010323 5.6e-07 58.2 47 74.5
Sp3g23980 Schrenkiella parvula HOM05D008158 ORTHO05D371579 5.6e-07 58.2 48 70.8
AL3G42960 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 7.3e-07 57.8 47 74.5
AL3G42950 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 9.6e-07 57.4 47 74.5
A07p06140 Brassica napus HOM05D008158 ORTHO05D010323 9.6e-07 57.4 47 70.2
A03p44630 Brassica napus HOM05D008158 ORTHO05D010323 1.6e-06 56.6 46 67.4
BraA03t13598Z Brassica rapa HOM05D008158 ORTHO05D010323 2.1e-06 56.2 46 67.4
BraA04t17885Z Brassica rapa HOM05D008158 ORTHO05D010323 2.8e-06 55.8 48 70.8
C07p09670 Brassica napus HOM05D008158 ORTHO05D010323 3.6e-06 55.5 47 70.2
BolC7t41408H Brassica oleracea HOM05D008158 ORTHO05D010323 3.6e-06 55.5 47 70.2
BcaB08g34502 Brassica carinata HOM05D008158 ORTHO05D010323 4.8e-06 55.1 51 62.7
A10p08930 Brassica napus HOM05D008158 ORTHO05D010323 4.8e-06 55.1 49 65.3
BraA10t42972Z Brassica rapa HOM05D008158 ORTHO05D010323 4.8e-06 55.1 49 65.3
C07p09690 Brassica napus HOM05D008158 ORTHO05D010323 6.2e-06 54.7 55 65.5
BcaC01g03160 Brassica carinata HOM05D008158 ORTHO05D010323 8.1e-06 54.3 46 63.0
C03p55460 Brassica napus HOM05D008158 ORTHO05D010323 8.1e-06 54.3 46 63.0
BolC3t17821H Brassica oleracea HOM05D008158 ORTHO05D010323 8.1e-06 54.3 46 63.0


User provided reference genes

Program Settings