Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G42830 Arabidopsis lyrata HOM05D006015 ORTHO05D007816 7.3e-261 903.3 431 100.0
AT2G05320 Arabidopsis thaliana HOM05D006015 ORTHO05D007816 3.4e-250 867.8 431 95.4
Carub.0003s2938 Capsella rubella HOM05D006015 ORTHO05D007816 2.4e-243 845.1 432 93.3
Sp3g23770 Schrenkiella parvula HOM05D006015 ORTHO05D007816 6.9e-235 817.0 431 89.6
Thhalv10002538m.g Eutrema salsugineum HOM05D006015 ORTHO05D007816 1.4e-232 809.3 431 89.3
BcaB08g34500 Brassica carinata HOM05D006015 ORTHO05D007816 1.4e-224 782.7 431 86.1
C03p55440 Brassica napus HOM05D006015 ORTHO05D007816 2.1e-212 742.3 431 82.6
BolC3t17819H Brassica oleracea HOM05D006015 ORTHO05D007816 1.1e-211 740.0 431 82.4
Aa31LG8G11520 Aethionema arabicum HOM05D006015 ORTHO05D007816 1.8e-211 739.2 423 82.3
BcaC01g03165 Brassica carinata HOM05D006015 ORTHO05D007816 1.8e-211 739.2 431 82.4
A03p44610 Brassica napus HOM05D006015 ORTHO05D007816 1.8e-211 739.2 431 82.1
BraA03t13594Z Brassica rapa HOM05D006015 ORTHO05D007816 5.3e-211 737.6 431 81.9
THA.LOC104808847 Tarenaya hassleriana HOM05D006015 ORTHO05D007816 4.1e-203 711.4 431 76.8
CARHR103100 Cardamine hirsuta HOM05D006015 ORTHO05D007816 6.1e-199 697.6 359 90.3
Duzib211G0350 Durio zibethinus HOM05D006015 ORTHO05D007816 1.7e-177 626.3 430 67.0
Thecc.01G195800 Theobroma cacao HOM05D006015 ORTHO05D007816 2.2e-177 625.9 431 67.7
Lj6g0021297 Lotus japonicus HOM05D006015 ORTHO05D007816 3.2e-176 622.1 438 67.6
Eucgr.H00879 Eucalyptus grandis HOM05D006015 ORTHO05D007816 5.5e-176 621.3 427 67.9
COL.COLO4_33334 Corchorus olitorius HOM05D006015 ORTHO05D007816 7.2e-176 620.9 429 68.5
Gohir.A11G149000 Gossypium hirsutum HOM05D006015 ORTHO05D007816 1.2e-175 620.2 431 67.5
Cpa.g.sc136.28 Carica papaya HOM05D006015 ORTHO05D007816 2.1e-175 619.4 421 67.5
Gorai.007G166200 Gossypium raimondii HOM05D006015 ORTHO05D007816 1.4e-174 616.7 431 67.5
Ciclev10015287m.g Citrus clementina HOM05D006015 ORTHO05D007816 4.0e-174 615.1 433 66.3
Gohir.D11G156100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 5.2e-174 614.8 431 66.8
Psat6g109000 Pisum sativum HOM05D006015 ORTHO05D007816 5.2e-174 614.8 431 67.5
Cfa014228 Carpinus fangiana HOM05D006015 ORTHO05D007816 1.5e-173 613.2 422 67.5
Ca_25000_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 2.6e-173 612.5 429 66.9
Ca_30801_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 2.6e-173 612.5 429 66.9
Duzib138G1954 Durio zibethinus HOM05D006015 ORTHO05D007816 3.3e-173 612.1 429 66.2
Medtr1g046210 Medicago truncatula HOM05D006015 ORTHO05D007816 7.5e-173 610.9 432 65.7
Glyma.10G128800 Glycine max HOM05D006015 ORTHO05D007816 2.2e-172 609.4 425 67.8
CiPaw.04G196900 Carya illinoinensis HOM05D006015 ORTHO05D007816 2.8e-172 609.0 421 68.4
Lalb_Chr03g0036841 Lupinus albus HOM05D006015 ORTHO05D007816 6.3e-172 607.8 430 66.5
Migut.K00073 Erythranthe guttata HOM05D006015 ORTHO05D007816 8.3e-172 607.4 431 66.1
QL04p068533 Quercus lobata HOM05D006015 ORTHO05D007816 8.3e-172 607.4 427 66.3
Phvul.007G239000 Phaseolus vulgaris HOM05D006015 ORTHO05D007816 1.1e-171 607.1 423 66.2
VMungo0720G1520 Vigna mungo HOM05D006015 ORTHO05D007816 1.4e-171 606.7 420 66.9
DCAR_019683 Daucus carota HOM05D006015 ORTHO05D007816 2.4e-171 605.9 419 66.1
Gorai.001G221700 Gossypium raimondii HOM05D006015 ORTHO05D007816 2.4e-171 605.9 423 66.7
Rhsim04G0027900 Rhododendron simsii HOM05D006015 ORTHO05D007816 5.3e-171 604.7 427 66.3
CSS0001355 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 7.0e-171 604.4 419 65.2
CSS0036117 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 7.0e-171 604.4 419 65.2
CSS0038739 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 9.1e-171 604.0 420 66.7
Sc21g0000520 Simmondsia chinensis HOM05D006015 ORTHO05D007816 1.2e-170 603.6 425 64.7
Rhsim06G0176400 Rhododendron simsii HOM05D006015 ORTHO05D007816 1.6e-170 603.2 422 66.8
Gohir.D07G198100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 2.0e-170 602.8 423 66.4
Dinv26607 Davidia involucrata HOM05D006015 ORTHO05D007816 2.7e-170 602.4 427 65.6
MSTRG.10825 Avicennia marina HOM05D006015 ORTHO05D007816 5.9e-170 601.3 426 66.0
Manes.12G065800 Manihot esculenta HOM05D006015 ORTHO05D007816 7.7e-170 600.9 430 65.6
Potri.014G167200 Populus trichocarpa HOM05D006015 ORTHO05D007816 7.7e-170 600.9 415 66.7
Lalb_Chr01g0011281 Lupinus albus HOM05D006015 ORTHO05D007816 1.0e-169 600.5 432 65.3
Sabra14G0127200 Salix brachista HOM05D006015 ORTHO05D007816 1.0e-169 600.5 409 67.0
PGSC0003DMG400017397 Solanum tuberosum HOM05D006015 ORTHO05D007816 1.3e-169 600.1 416 67.1
Cc08_g02360 Coffea canephora HOM05D006015 ORTHO05D007816 1.7e-169 599.7 419 64.4
TAR629G2010 Trochodendron aralioides HOM05D006015 ORTHO05D007816 2.2e-169 599.4 419 65.2
Oeu064356.1 Olea europaea HOM05D006015 ORTHO05D007816 2.9e-169 599.0 425 65.2
TWI75G1720 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 2.9e-169 599.0 425 65.2
HanXRQChr11g0329021 Helianthus annuus HOM05D006015 ORTHO05D007816 3.8e-169 598.6 427 64.2
AUR62029116 Chenopodium quinoa HOM05D006015 ORTHO05D007816 8.5e-169 597.4 416 66.8
Sopen07g024010 Solanum pennellii HOM05D006015 ORTHO05D007816 1.1e-168 597.0 416 67.1
Atru.chr6.3393 Acer truncatum HOM05D006015 ORTHO05D007816 2.5e-168 595.9 429 65.0
Aqoxy1G04250 Aquilegia oxysepala HOM05D006015 ORTHO05D007816 2.5e-168 595.9 411 66.7
vmacro12084 Vaccinium macrocarpon HOM05D006015 ORTHO05D007816 3.2e-168 595.5 346 76.6
Solyc07g045470.3 Solanum lycopersicum HOM05D006015 ORTHO05D007816 5.5e-168 594.7 416 66.8
PGR083G2314 Punica granatum HOM05D006015 ORTHO05D007816 7.2e-168 594.3 427 66.3
TPR.G23976 Trifolium pratense HOM05D006015 ORTHO05D007816 1.2e-167 593.6 431 64.0
MD17G1116800 Malus domestica HOM05D006015 ORTHO05D007816 1.6e-167 593.2 426 64.3
Nn3g19725 Nelumbo nucifera HOM05D006015 ORTHO05D007816 2.7e-167 592.4 429 63.4
TWI18G0302 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 6.1e-167 591.3 433 64.0
FAN02G2834 Fragaria x ananassa HOM05D006015 ORTHO05D007816 1.4e-166 590.1 421 64.4
FAN09G3933 Fragaria x ananassa HOM05D006015 ORTHO05D007816 1.4e-166 590.1 421 64.4
Lsat_1_v5_gn_7_96920 Lactuca sativa HOM05D006015 ORTHO05D007816 2.3e-166 589.3 422 63.0
Peaxi162Scf00802g00022 Petunia axillaris HOM05D006015 ORTHO05D007816 2.3e-166 589.3 424 64.9
Atru.BG.41.p Acer truncatum HOM05D006015 ORTHO05D007816 3.0e-166 589.0 351 74.4
CAN.G177.8 Capsicum annuum HOM05D006015 ORTHO05D007816 3.0e-166 589.0 416 66.3
FAN14G1195 Fragaria x ananassa HOM05D006015 ORTHO05D007816 1.2e-165 587.0 421 64.1
Nitab4.5_0001867g0080 Nicotiana tabacum HOM05D006015 ORTHO05D007816 1.2e-165 587.0 424 65.8
FAN05G5154 Fragaria x ananassa HOM05D006015 ORTHO05D007816 1.5e-165 586.6 421 64.1
MD09G1126500 Malus domestica HOM05D006015 ORTHO05D007816 1.5e-165 586.6 426 62.9
Nitab4.5_0001701g0190 Nicotiana tabacum HOM05D006015 ORTHO05D007816 1.5e-165 586.6 351 76.1
RcHm_v2.0_Chr2g0156011 Rosa chinensis HOM05D006015 ORTHO05D007816 1.5e-165 586.6 421 63.7
FvH4_6g40640 Fragaria vesca HOM05D006015 ORTHO05D007816 2.6e-165 585.9 421 63.9
MSTRG.6445 Avicennia marina HOM05D006015 ORTHO05D007816 4.4e-165 585.1 428 64.0
ECA236G0403 Erigeron canadensis HOM05D006015 ORTHO05D007816 7.5e-165 584.3 427 63.0
Sed0014474 Sechium edule HOM05D006015 ORTHO05D007816 2.4e-163 579.3 424 64.2
CsaV3_7G002510 Cucumis sativus L. HOM05D006015 ORTHO05D007816 2.0e-162 576.2 423 62.6
MELO3C024194.2 Cucumis melo HOM05D006015 ORTHO05D007816 4.5e-162 575.1 429 62.5
Lj1P796T26 Lonicera japonica HOM05D006015 ORTHO05D007816 7.7e-162 574.3 338 75.4
ClCG02G002870 Citrullus lanatus HOM05D006015 ORTHO05D007816 2.9e-161 572.4 427 62.5
CANSAT64G2535 Cannabis sativa HOM05D006015 ORTHO05D007816 3.8e-161 572.0 428 62.9
Hma1.2p1_0545F.1_g175930 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 1.9e-160 569.7 357 70.9
Lj8P135T89 Lonicera japonica HOM05D006015 ORTHO05D007816 4.2e-160 568.5 340 74.1
PSO302G0043 Papaver somniferum HOM05D006015 ORTHO05D007816 4.2e-160 568.5 428 61.7
Gohir.A07G191800 Gossypium hirsutum HOM05D006015 ORTHO05D007816 6.1e-159 564.7 423 63.8
ATR0827G116 Amborella trichopoda HOM05D006015 ORTHO05D007816 1.0e-158 563.9 433 61.7
Sed0012767 Sechium edule HOM05D006015 ORTHO05D007816 1.4e-158 563.5 425 61.9
unitig_37.g12711 Utricularia gibba HOM05D006015 ORTHO05D007816 1.4e-158 563.5 435 61.6
Ah.01g002640 Amaranthus hybridus HOM05D006015 ORTHO05D007816 2.3e-158 562.8 357 70.6
MBI16_g07770_MAGBIO Magnolia biondii HOM05D006015 ORTHO05D007816 3.0e-158 562.4 428 61.4
PSO210G7679 Papaver somniferum HOM05D006015 ORTHO05D007816 4.0e-158 562.0 421 61.8
SGA_v2.0_scaffold94G28455 Striga asiatica HOM05D003478 ORTHO05D004196 3.4e-157 558.9 427 61.1
HPP92_001839 Vanilla planifolia HOM05D006015 ORTHO05D007816 3.4e-157 558.9 374 67.1
CDE05G3376 Ceratophyllum demersum HOM05D006015 ORTHO05D007816 2.2e-156 556.2 417 61.2
AUR62015007 Chenopodium quinoa HOM05D006015 ORTHO05D007816 3.7e-156 555.4 401 65.6
SHI10157 Sapria himalayana HOM05D006015 ORTHO05D007816 4.7e-151 538.5 372 65.9
SEGI_05803 Sequoiadendron giganteum HOM05D006015 ORTHO05D007816 5.8e-149 531.6 388 62.9
Os02g0798100 Oryza sativa ssp. japonica HOM05D006015 ORTHO05D007816 9.8e-149 530.8 360 65.6
Actinidia07868 Actinidia chinensis HOM05D006015 ORTHO05D007816 1.3e-148 530.4 423 61.0
Migut.J01779 Erythranthe guttata HOM05D006015 ORTHO05D007816 9.2e-147 524.2 427 57.6
Nn1g02851 Nelumbo nucifera HOM05D006015 ORTHO05D007816 9.2e-147 524.2 350 67.1
Zm00001eb192260 Zea mays HOM05D006015 ORTHO05D007816 9.2e-147 524.2 361 64.8
Glyma.20G080200 Glycine max HOM05D006015 ORTHO05D007816 3.5e-138 495.7 290 75.9
Prupe.3G198000 Prunus persica HOM05D006015 ORTHO05D007816 4.6e-138 495.4 283 75.3
Pp3c8_6700 Physcomitrium patens HOM05D006015 ORTHO05D007816 2.3e-134 483.0 425 54.6
Pp3c12_25130 Physcomitrium patens HOM05D006015 ORTHO05D007816 8.9e-134 481.1 356 61.0
Actinidia18833 Actinidia chinensis HOM05D006015 ORTHO05D007816 1.5e-133 480.3 423 56.5
SMO358G0350 Selaginella moellendorffii HOM05D006015 ORTHO05D007816 2.4e-131 473.0 350 59.7
Mapoly0086s0006 Marchantia polymorpha HOM05D006015 ORTHO05D007816 9.2e-131 471.1 371 59.8
SalBow1G4868 Salvia bowleyana HOM05D006015 ORTHO05D007816 2.1e-114 416.8 322 62.1
SalBow6G1876 Salvia bowleyana HOM05D006015 ORTHO05D007816 3.2e-99 366.3 215 74.4
MSTRG.26113 Avicennia marina HOM05D006015 ORTHO05D007816 4.6e-98 362.5 211 74.9
AagrBONN_evm.TU.Sc2ySwM_368.1590 Anthoceros agrestis HOM05D006015 ORTHO05D007816 1.3e-97 360.9 378 49.5
Hma1.2p1_0545F.1_g175940 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 8.2e-95 351.7 209 74.2
CBR_g52107 Chara braunii HOM05D006015 ORTHO05D000002 1.5e-93 347.4 291 55.3
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 4.2e-59 233.0 235 50.6
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 1.2e-53 214.9 377 37.7
Nn5g28971 Nelumbo nucifera HOM05D006015 ORTHO05D007816 3.9e-28 130.2 98 56.1
EL10Ac8g18725 Beta vulgaris HOM05D006015 ORTHO05D007816 7.3e-27 125.9 80 68.8
Actinidia35205 Actinidia chinensis HOM05D001060 ORTHO05D000905 1.2e-24 118.6 199 35.7
Aa31LG8G11540 Aethionema arabicum HOM05D006015 ORTHO05D007816 5.4e-22 109.8 121 47.9
Aa31LG8G11530 Aethionema arabicum HOM05D006015 ORTHO05D059074 4.0e-09 67.0 75 52.0


User provided reference genes

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