Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G42820 Arabidopsis lyrata HOM05D007442 ORTHO05D009284 6.3e-64 247.3 126 100.0
AT4G13500 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 1.8e-58 229.2 126 92.1
Sp3g23760 Schrenkiella parvula HOM05D007442 ORTHO05D009284 2.3e-53 212.2 130 86.9
BcaB06g26827 Brassica carinata HOM05D007442 ORTHO05D009284 4.3e-52 208.0 126 87.3
BcaC06g35915 Brassica carinata HOM05D007442 ORTHO05D009284 4.3e-52 208.0 126 87.3
BolC7t41415H Brassica oleracea HOM05D007442 ORTHO05D009284 4.3e-52 208.0 126 87.3
C05p43360 Brassica napus HOM05D007442 ORTHO05D009284 5.6e-52 207.6 126 87.3
BraA07t28440Z Brassica rapa HOM05D007442 ORTHO05D009284 2.1e-51 205.7 126 86.5
C07p09770 Brassica napus HOM05D007442 ORTHO05D009284 2.8e-51 205.3 126 86.5
Thhalv10002726m.g Eutrema salsugineum HOM05D007442 ORTHO05D009284 3.1e-50 201.8 129 81.4
Carub.0003s2673 Capsella rubella HOM05D007442 ORTHO05D009284 9.8e-49 196.8 131 79.4
THA.LOC104826628 Tarenaya hassleriana HOM05D007442 ORTHO05D009284 4.0e-42 174.9 126 73.0
Aa31LG5G16680 Aethionema arabicum HOM05D001040 ORTHO05D002795 1.2e-38 163.3 131 71.0
Prupe.3G197600 Prunus persica HOM05D007442 ORTHO05D009284 2.1e-35 152.5 126 64.3
Dinv21296 Davidia involucrata HOM05D007442 ORTHO05D009284 8.1e-35 150.6 127 66.9
Potri.014G167300 Populus trichocarpa HOM05D007442 ORTHO05D009284 8.1e-35 150.6 126 66.7
Sabra14G0127300 Salix brachista HOM05D007442 ORTHO05D009284 8.1e-35 150.6 102 73.5
Manes.12G065601 Manihot esculenta HOM05D007442 ORTHO05D009284 1.4e-34 149.8 118 65.3
Eucgr.H00878 Eucalyptus grandis HOM05D007442 ORTHO05D009284 1.8e-34 149.4 107 70.1
Gohir.D07G198200 Gossypium hirsutum HOM05D007442 ORTHO05D009284 1.8e-34 149.4 126 65.9
Gorai.001G221800 Gossypium raimondii HOM05D007442 ORTHO05D009284 1.8e-34 149.4 126 65.9
Dinv26606 Davidia involucrata HOM05D007442 ORTHO05D009284 2.3e-34 149.1 127 66.1
GSVIVG01030083001 Vitis vinifera HOM05D007442 ORTHO05D009284 5.2e-34 147.9 127 64.6
Sed0005163 Sechium edule HOM05D007442 ORTHO05D009284 1.2e-33 146.7 121 65.3
Gohir.A07G191900 Gossypium hirsutum HOM05D007442 ORTHO05D009284 1.5e-33 146.4 128 64.8
CSS0032520 Camellia sinensis var. sinensis HOM05D007442 ORTHO05D009284 2.0e-33 146.0 108 66.7
Thecc.01G195900 Theobroma cacao HOM05D007442 ORTHO05D009284 2.0e-33 146.0 127 63.8
CsaV3_6G009590 Cucumis sativus L. HOM05D007442 ORTHO05D009284 5.8e-33 144.4 129 64.3
Lsat_1_v5_gn_7_96821 Lactuca sativa HOM05D007442 ORTHO05D009284 7.6e-33 144.1 122 63.9
Nn1g07499 Nelumbo nucifera HOM05D007442 ORTHO05D009284 7.6e-33 144.1 132 63.6
ClCG02G009230 Citrullus lanatus HOM05D007442 ORTHO05D009284 9.9e-33 143.7 130 64.6
CANSAT80G0988 Cannabis sativa HOM05D007442 ORTHO05D009284 2.2e-32 142.5 101 70.3
Phvul.008G289000 Phaseolus vulgaris HOM05D007442 ORTHO05D009284 2.2e-32 142.5 125 65.6
arahy.Tifrunner.gnm1.ann1.8YE7LP Arachis hypogaea HOM05D007442 ORTHO05D009284 2.9e-32 142.1 96 74.0
VMungo0647G0872 Vigna mungo HOM05D007442 ORTHO05D009284 2.9e-32 142.1 111 69.4
Ciclev10017197m.g Citrus clementina HOM05D007442 ORTHO05D009284 3.7e-32 141.7 126 60.3
Lj8A135T99 Lonicera japonica HOM05D007442 ORTHO05D009284 4.9e-32 141.4 118 65.3
QL04p068504 Quercus lobata HOM05D007442 ORTHO05D009284 4.9e-32 141.4 125 60.0
SGA_v2.0_scaffold49G18406 Striga asiatica HOM05D007442 ORTHO05D009284 4.9e-32 141.4 90 75.6
Nitab4.5_0002154g0020 Nicotiana tabacum HOM05D007442 ORTHO05D009284 6.4e-32 141.0 83 83.1
TWI18G1416 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 6.4e-32 141.0 123 62.6
Glyma.02G308900 Glycine max HOM05D007442 ORTHO05D009284 8.4e-32 140.6 109 67.0
Nitab4.5_0000006g0670 Nicotiana tabacum HOM05D007442 ORTHO05D009284 8.4e-32 140.6 83 83.1
Peaxi162Scf00147g01918 Petunia axillaris HOM05D007442 ORTHO05D009284 8.4e-32 140.6 83 81.9
Sc06g0009910 Simmondsia chinensis HOM05D007442 ORTHO05D009284 8.4e-32 140.6 127 60.6
Solyc05g024430.3 Solanum lycopersicum HOM05D007442 ORTHO05D009284 1.1e-31 140.2 98 73.5
Sed0010901 Sechium edule HOM05D007442 ORTHO05D009284 1.4e-31 139.8 129 62.0
arahy.Tifrunner.gnm1.ann1.C8HW3T Arachis hypogaea HOM05D007442 ORTHO05D009284 1.9e-31 139.4 104 72.1
HanXRQChr11g0329011 Helianthus annuus HOM05D007442 ORTHO05D009284 1.9e-31 139.4 122 63.9
MD17G1116900 Malus domestica HOM05D007442 ORTHO05D009284 1.9e-31 139.4 109 67.9
Actinidia35204 Actinidia chinensis HOM05D007442 ORTHO05D009284 2.4e-31 139.0 126 61.1
CiPaw.03G281600 Carya illinoinensis HOM05D007442 ORTHO05D009284 2.4e-31 139.0 112 65.2
PGSC0003DMG400018833 Solanum tuberosum HOM05D007442 ORTHO05D009284 2.4e-31 139.0 94 75.5
TPR.G35906 Trifolium pratense HOM05D007442 ORTHO05D009284 3.2e-31 138.7 78 84.6
LjContig00081g0000923 Lotus japonicus HOM05D007442 ORTHO05D009284 5.4e-31 137.9 113 62.8
PGR083G2291 Punica granatum HOM05D007442 ORTHO05D009284 5.4e-31 137.9 119 64.7
FAN05G2406 Fragaria x ananassa HOM05D007442 ORTHO05D009284 7.1e-31 137.5 108 66.7
Sopen05g019430 Solanum pennellii HOM05D007442 ORTHO05D009284 7.1e-31 137.5 98 72.4
Duzib138G0628 Durio zibethinus HOM05D007442 ORTHO05D009284 9.2e-31 137.1 126 61.1
ECA236G2600 Erigeron canadensis HOM05D007442 ORTHO05D009284 9.2e-31 137.1 133 58.6
Haze_12630 Corylus avellana HOM05D007442 ORTHO05D009284 1.2e-30 136.7 109 64.2
PSO302G0215 Papaver somniferum HOM05D007442 ORTHO05D009284 1.2e-30 136.7 80 82.5
TWI36G1704 Tripterygium wilfordii HOM05D007442 ORTHO05D009284 1.2e-30 136.7 102 67.6
PSO210G6456 Papaver somniferum HOM05D007442 ORTHO05D009284 1.6e-30 136.3 80 82.5
Psat2g002440 Pisum sativum HOM05D007442 ORTHO05D009284 1.6e-30 136.3 81 82.7
MSTRG.12248 Avicennia marina HOM05D007442 ORTHO05D009284 2.7e-30 135.6 81 80.2
FvH4_6g40630 Fragaria vesca HOM05D007442 ORTHO05D009284 2.7e-30 135.6 108 65.7
FAN02G0623 Fragaria x ananassa HOM05D007442 ORTHO05D009284 2.7e-30 135.6 108 65.7
FAN09G1668 Fragaria x ananassa HOM05D007442 ORTHO05D009284 2.7e-30 135.6 108 65.7
FAN14G4407 Fragaria x ananassa HOM05D007442 ORTHO05D009284 2.7e-30 135.6 108 65.7
RcHm_v2.0_Chr2g0156001 Rosa chinensis HOM05D007442 ORTHO05D009284 1.0e-29 133.7 108 66.7
Zm00001eb049770 Zea mays HOM05D007442 ORTHO05D009284 1.0e-29 133.7 78 83.3
Cfa014227 Carpinus fangiana HOM05D007442 ORTHO05D009284 1.3e-29 133.3 125 57.6
Cc00_g11580 Coffea canephora HOM05D007442 ORTHO05D009284 1.3e-29 133.3 126 61.1
Os03g0595300 Oryza sativa ssp. japonica HOM05D007442 ORTHO05D009284 1.3e-29 133.3 72 88.9
Oeu064352.1 Olea europaea HOM05D007442 ORTHO05D009284 5.1e-29 131.3 126 61.9
Atru.BG.34.p Acer truncatum HOM05D007442 ORTHO05D009284 8.6e-29 130.6 69 84.1
EL10Ac9g22680 Beta vulgaris HOM05D007442 ORTHO05D009284 3.3e-28 128.6 76 76.3
DCAR_021093 Daucus carota HOM05D007442 ORTHO05D009284 4.3e-28 128.3 104 64.4
Lalb_Chr04g0247091 Lupinus albus HOM05D007442 ORTHO05D009284 4.3e-28 128.3 127 58.3
AT2G05310 Arabidopsis thaliana HOM05D007442 ORTHO05D009284 5.6e-28 127.9 78 87.2
MD09G1126600 Malus domestica HOM05D007442 ORTHO05D009284 5.6e-28 127.9 74 83.8
unitig_62.g23255 Utricularia gibba HOM05D007442 ORTHO05D009284 5.6e-28 127.9 84 75.0
TAR629G1602 Trochodendron aralioides HOM05D007442 ORTHO05D009284 1.2e-27 126.7 67 86.6
Duzib211G0040 Durio zibethinus HOM05D007442 ORTHO05D009284 2.1e-27 125.9 130 58.5
Migut.H01284 Erythranthe guttata HOM05D007442 ORTHO05D009284 2.1e-27 125.9 83 74.7
Medtr5g098530 Medicago truncatula HOM05D007442 ORTHO05D009284 2.1e-27 125.9 124 59.7
vmacro09481 Vaccinium macrocarpon HOM05D007442 ORTHO05D009284 8.9e-26 120.6 160 45.6
SEGI_21691 Sequoiadendron giganteum HOM05D007442 ORTHO05D009284 1.7e-24 116.3 108 59.3
SMO364G0127 Selaginella moellendorffii HOM05D007442 ORTHO05D009284 6.4e-24 114.4 70 72.9
Glyma.14G004000 Glycine max HOM05D007442 ORTHO05D009284 1.1e-23 113.6 126 56.3
Mapoly0072s0101 Marchantia polymorpha HOM05D007442 ORTHO05D009284 9.3e-23 110.5 129 51.2
CDE04G1945 Ceratophyllum demersum HOM05D007442 ORTHO05D009284 1.6e-22 109.8 72 76.4
CARHR103090 Cardamine hirsuta HOM05D007442 ORTHO05D009284 4.3e-20 101.7 49 95.9
MBI16_g07768_MAGBIO Magnolia biondii HOM05D007442 ORTHO05D009284 1.6e-19 99.8 48 91.7
Pp3c21_15030 Physcomitrium patens HOM05D007442 ORTHO05D009284 2.4e-15 85.9 70 55.7
Rhsim04G0028000 Rhododendron simsii HOM05D000264 ORTHO05D009284 4.2e-15 85.1 58 67.2
AagrBONN_evm.TU.Sc2ySwM_368.44 Anthoceros agrestis HOM05D007442 ORTHO05D009284 7.9e-14 80.9 73 50.7
Cre03.g151200 Chlamydomonas reinhardtii HOM05D007442 ORTHO05D009284 2.4e-10 69.3 69 49.3
CARHR103080 Cardamine hirsuta HOM05D007442 ORTHO05D009284 2.6e-09 65.9 59 74.6
COL.COLO4_33329 Corchorus olitorius HOM05D007442 ORTHO05D009284 6.0e-06 54.7 78 53.8


User provided reference genes

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