Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G41440 Arabidopsis lyrata HOM05D013448 ORTHO05D021414 6.8e-187 657.1 322 100.0
AL1G67350 Arabidopsis lyrata HOM05D003177 ORTHO05D003481 9.9e-138 493.8 258 93.8
AL7G51780 Arabidopsis lyrata HOM05D013448 ORTHO05D001112 6.0e-127 458.0 356 68.3
AL5G18360 Arabidopsis lyrata HOM05D002743 ORTHO05D002895 3.6e-111 405.6 204 96.1
AL1G18540 Arabidopsis lyrata HOM05D013448 ORTHO05D021414 9.3e-35 151.8 322 35.1
AL2G12710 Arabidopsis lyrata HOM05D013448 ORTHO05D016590 1.1e-32 144.8 83 89.2
C01p36490 Brassica napus HOM05D025437 ORTHO05D016590 4.6e-26 122.9 133 53.4
C05p13000 Brassica napus HOM05D009700 ORTHO05D012032 4.2e-19 99.8 185 34.6
Sp2g06910 Schrenkiella parvula HOM05D013448 ORTHO05D021414 7.1e-19 99.0 241 33.2
SpUn0014_0060 Schrenkiella parvula HOM05D013448 ORTHO05D021414 7.1e-19 99.0 241 33.2
Thhalv10023071m.g Eutrema salsugineum HOM05D013448 ORTHO05D016590 2.7e-18 97.1 86 61.6
A08p28740 Brassica napus HOM05D009700 ORTHO05D001112 1.8e-14 84.3 274 24.8
AT3G14780 Arabidopsis thaliana HOM05D000230 ORTHO05D000176 6.9e-14 82.4 123 39.8
BcaC03g17080 Brassica carinata HOM05D009700 ORTHO05D012032 2.6e-13 80.5 262 27.9
BcaC09g51242 Brassica carinata HOM05D011339 ORTHO05D012985 1.3e-12 78.2 225 27.1
AL3G27090 Arabidopsis lyrata HOM05D000230 ORTHO05D016590 4.9e-12 76.3 88 45.5
BraA09t38648Z Brassica rapa HOM05D011339 ORTHO05D012985 1.9e-11 74.3 226 26.5
Aa31sc70G40 Aethionema arabicum HOM05D009700 ORTHO05D012032 2.5e-11 73.9 262 23.3
BolC6t37458H Brassica oleracea HOM05D009700 ORTHO05D001112 1.2e-10 71.6 97 41.2
A02p24700 Brassica napus HOM05D030042 ORTHO05D027534 7.9e-10 68.9 150 32.0
SpUn0248_0010 Schrenkiella parvula HOM05D013448 ORTHO05D021414 1.1e-08 65.1 104 37.5
BcaB04g18158 Brassica carinata HOM05D011339 ORTHO05D012985 1.5e-08 64.7 248 27.8
BcaB04g18577 Brassica carinata HOM05D009700 ORTHO05D012032 3.3e-08 63.5 130 31.5
Aa31LG9G11090 Aethionema arabicum HOM05D011111 ORTHO05D001112 1.3e-07 61.6 80 32.5
Aa31LG9G11080 Aethionema arabicum HOM05D011111 ORTHO05D001112 2.8e-07 60.5 78 33.3
BcaC02g11176 Brassica carinata HOM05D011111 ORTHO05D001112 6.3e-07 59.3 73 32.9
C07p08480 Brassica napus HOM05D009700 ORTHO05D012032 6.3e-07 59.3 88 39.8
BolC8t48430H Brassica oleracea HOM05D011111 ORTHO05D001112 1.8e-06 57.8 75 33.3
AT4G03740 Arabidopsis thaliana HOM05D001086 ORTHO05D001112 5.3e-06 56.2 71 32.4
Carub.0005s1400 Capsella rubella HOM05D004889 ORTHO05D016590 6.9e-06 55.8 63 49.2
SpUn0438_0010 Schrenkiella parvula HOM05D012374 ORTHO05D017111 6.9e-06 55.8 75 32.0


User provided reference genes

Program Settings