Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G41380 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 1.5e-94 349.7 210 100.0
AL269U10022 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 7.5e-94 347.4 210 99.5
AL3G41390 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 7.5e-94 347.4 210 99.5
AL269U10050 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 5.4e-92 341.3 210 97.6
AL269U10040 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 2.7e-91 339.0 210 96.7
AL269U10030 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 2.3e-90 335.9 210 96.2
AL8G37440 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 3.0e-82 308.9 234 84.6
AL3G41370 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 4.6e-75 285.0 141 99.3
AT5G60840 Arabidopsis thaliana HOM05D010173 ORTHO05D007801 7.3e-73 277.7 210 82.9
AL3G41400 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 3.6e-56 222.2 227 72.2
AL215U10060 Arabidopsis lyrata HOM05D010173 ORTHO05D007801 2.1e-51 206.5 210 71.4
Carub.0008s2154 Capsella rubella HOM05D010173 ORTHO05D007801 2.6e-46 189.5 204 67.2
Thhalv10004975m.g Eutrema salsugineum HOM05D010173 ORTHO05D007801 1.5e-38 163.7 206 53.9
Sp2g24160 Schrenkiella parvula HOM05D010173 ORTHO05D007801 1.0e-29 134.4 203 45.3
BcaC06g33198 Brassica carinata HOM05D010173 ORTHO05D007801 4.8e-24 115.5 142 50.0
BcaNung02618 Brassica carinata HOM05D010173 ORTHO05D007801 3.4e-22 109.4 133 51.1
C07p44600 Brassica napus HOM05D010173 ORTHO05D007801 3.4e-22 109.4 133 51.1
BolC7t44981H Brassica oleracea HOM05D010173 ORTHO05D007801 3.4e-22 109.4 133 51.1
BraA03t13778Z Brassica rapa HOM05D010173 ORTHO05D007801 3.4e-22 109.4 131 49.6
A03p46540 Brassica napus HOM05D010173 ORTHO05D007801 1.7e-21 107.1 142 45.8
CARHR274520 Cardamine hirsuta HOM05D010173 ORTHO05D007801 1.1e-20 104.4 141 41.8
BcaNung05759 Brassica carinata HOM05D010173 ORTHO05D007801 2.7e-19 99.8 96 53.1
BcaNung02617 Brassica carinata HOM05D010173 ORTHO05D007801 3.0e-18 96.3 143 44.8
Aa31LG11G2440 Aethionema arabicum HOM05D007643 ORTHO05D007801 3.3e-17 92.8 136 44.9
Thecc.03G110800 Theobroma cacao HOM05D007643 ORTHO05D007801 5.5e-12 75.5 112 41.1
TWI15G0080 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 2.7e-11 73.2 119 37.8
COL.COLO4_28832 Corchorus olitorius HOM05D007643 ORTHO05D007801 3.6e-11 72.8 104 43.3
Duzib068G1429 Durio zibethinus HOM05D007643 ORTHO05D007801 4.7e-11 72.4 133 38.3
THA.LOC104818362 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 4.7e-11 72.4 207 33.3
THA.LOC104800981 Tarenaya hassleriana HOM05D007643 ORTHO05D007801 6.1e-11 72.0 89 46.1
TWI81G0573 Tripterygium wilfordii HOM05D007643 ORTHO05D007801 1.8e-10 70.5 137 34.3
Potri.012G065400 Populus trichocarpa HOM05D007643 ORTHO05D007801 1.1e-09 67.8 78 48.7
Sed0015671 Sechium edule HOM05D007643 ORTHO05D007801 2.0e-09 67.0 108 40.7
Gohir.D12G187200 Gossypium hirsutum HOM05D007643 ORTHO05D007801 2.6e-09 66.6 137 35.8
CiPaw.15G116100 Carya illinoinensis HOM05D007643 ORTHO05D007801 3.3e-09 66.2 123 38.2
Gorai.007G040800 Gossypium raimondii HOM05D007643 ORTHO05D007801 3.3e-09 66.2 75 46.7
vmacro16469 Vaccinium macrocarpon HOM05D007643 ORTHO05D007801 4.4e-09 65.9 99 41.4
Gohir.D11G038100 Gossypium hirsutum HOM05D007643 ORTHO05D007801 7.4e-09 65.1 75 46.7
Gorai.008G200700 Gossypium raimondii HOM05D007643 ORTHO05D007801 7.4e-09 65.1 137 35.8
QL10p021414 Quercus lobata HOM05D007643 ORTHO05D007801 9.7e-09 64.7 120 37.5
Prupe.5G211300 Prunus persica HOM05D007643 ORTHO05D007801 1.3e-08 64.3 108 37.0
Sabra12G0046800 Salix brachista HOM05D007643 ORTHO05D007801 1.7e-08 63.9 78 46.2
Gohir.A12G184500 Gossypium hirsutum HOM05D007643 ORTHO05D007801 2.8e-08 63.2 138 34.1
ClCG06G015360 Citrullus lanatus HOM05D007643 ORTHO05D007801 3.7e-08 62.8 105 36.2
Rhsim12G0146900 Rhododendron simsii HOM05D000001 ORTHO05D000003 3.7e-08 62.8 87 43.7
Actinidia35057 Actinidia chinensis HOM05D007643 ORTHO05D007801 6.3e-08 62.0 88 38.6
Cfa019854 Carpinus fangiana HOM05D007643 ORTHO05D007801 6.3e-08 62.0 99 40.4
Eucgr.K02633 Eucalyptus grandis HOM05D007643 ORTHO05D007801 8.2e-08 61.6 61 55.7
Manes.14G090200 Manihot esculenta HOM05D007643 ORTHO05D007801 8.2e-08 61.6 103 38.8
Dinv36824 Davidia involucrata HOM05D007643 ORTHO05D007801 1.1e-07 61.2 71 45.1
Dinv38625 Davidia involucrata HOM05D007643 ORTHO05D007801 1.1e-07 61.2 68 47.1
FAN08G1142 Fragaria x ananassa HOM05D007643 ORTHO05D007801 1.1e-07 61.2 108 38.0
Actinidia18967 Actinidia chinensis HOM05D007643 ORTHO05D007801 1.4e-07 60.8 98 35.7
Ciclev10022625m.g Citrus clementina HOM05D007643 ORTHO05D007801 1.8e-07 60.5 115 33.0
FAN18G4512 Fragaria x ananassa HOM05D007643 ORTHO05D007801 1.8e-07 60.5 109 36.7
CsaV3_1G003240 Cucumis sativus L. HOM05D007643 ORTHO05D007801 2.4e-07 60.1 114 36.0
MELO3C017259.2 Cucumis melo HOM05D007643 ORTHO05D007801 3.1e-07 59.7 61 50.8
Atru.chr9.639 Acer truncatum HOM05D007643 ORTHO05D007801 5.3e-07 58.9 76 42.1
Ca_26376_v3 Cicer arietinum L. HOM05D007643 ORTHO05D007801 1.2e-06 57.8 113 31.9
PSO782G0046 Papaver somniferum HOM05D007643 ORTHO05D007801 1.5e-06 57.4 123 34.1
PSO063G2669 Papaver somniferum HOM05D007643 ORTHO05D007801 2.0e-06 57.0 123 30.9
RcHm_v2.0_Chr7g0183911 Rosa chinensis HOM05D007643 ORTHO05D007801 3.5e-06 56.2 106 36.8
PGR044G0452 Punica granatum HOM05D007643 ORTHO05D007801 7.7e-06 55.1 123 35.0


User provided reference genes

Program Settings