Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G41210 Arabidopsis lyrata HOM05D021647 ORTHO05D019732 0.0e+00 1711.8 883 100.0
AT1G41820 Arabidopsis thaliana HOM05D021647 ORTHO05D019732 4.5e-39 167.5 523 31.0
BNapus_Darmor_BZH_scaffold_51p00050 Brassica napus HOM05D008465 ORTHO05D010905 1.9e-26 125.6 722 24.9
Carub.0007s3319 Capsella rubella HOM05D021647 ORTHO05D019732 3.1e-24 118.2 159 45.9
Carub.0235s0001 Capsella rubella HOM05D021647 ORTHO05D019732 1.3e-22 112.8 182 40.1
Carub.0005s0875 Capsella rubella HOM05D021647 ORTHO05D019732 3.9e-19 101.3 164 39.6
BolC7t41352H Brassica oleracea HOM05D008465 ORTHO05D010905 1.7e-17 95.9 81 55.6
Carub.0002s0952 Capsella rubella HOM05D021647 ORTHO05D010905 3.1e-16 91.7 234 31.6
BNapus_Darmor_BZH_scaffold_51p00120 Brassica napus HOM05D008465 ORTHO05D010905 2.6e-15 88.6 172 34.3
BolC3t18787H Brassica oleracea HOM05D008465 ORTHO05D010905 3.8e-14 84.7 160 36.9
SpUn0104_0010 Schrenkiella parvula HOM05D006837 ORTHO05D009407 3.8e-14 84.7 257 29.6
BcaB05g22720 Brassica carinata HOM05D008465 ORTHO05D010905 1.9e-13 82.4 82 51.2
BolC8t47743H Brassica oleracea HOM05D008465 ORTHO05D010905 7.2e-13 80.5 189 33.3
BcaC02g10606 Brassica carinata HOM05D012556 ORTHO05D000563 3.6e-12 78.2 194 34.0
Carub.0073s0001 Capsella rubella HOM05D045566 ORTHO05D019732 4.4e-10 71.2 61 59.0
BolC6t36352H Brassica oleracea HOM05D008465 ORTHO05D010905 5.7e-10 70.9 115 36.5
BolC9t56658H Brassica oleracea HOM05D008465 ORTHO05D010905 5.7e-10 70.9 64 51.6
Sp6g12503 Schrenkiella parvula HOM05D006837 ORTHO05D009407 2.2e-09 68.9 150 36.7
SpUn0015_0170 Schrenkiella parvula HOM05D006837 ORTHO05D009407 2.2e-09 68.9 150 36.7
Carub.0007s3321 Capsella rubella HOM05D045566 ORTHO05D019732 2.8e-09 68.6 61 57.4
C03p65320 Brassica napus HOM05D008465 ORTHO05D010905 6.3e-09 67.4 57 52.6
BNapus_Darmor_BZH_scaffold_51p00080 Brassica napus HOM05D008465 ORTHO05D010905 1.4e-08 66.2 53 52.8
BraA08t33371Z Brassica rapa HOM05D008465 ORTHO05D010905 4.1e-08 64.7 64 46.9
BNapus_Darmor_BZH_scaffold_69p00060 Brassica napus HOM05D008465 ORTHO05D010905 5.3e-08 64.3 53 50.9
BolC7t40977H Brassica oleracea HOM05D008629 ORTHO05D012336 1.6e-07 62.8 90 41.1
SpUn0002_0040 Schrenkiella parvula HOM05D008465 ORTHO05D010905 5.9e-07 60.8 65 46.2
BNapus_Darmor_BZH_scaffold_94p00010 Brassica napus HOM05D008465 ORTHO05D010905 7.7e-07 60.5 52 50.0
BNapus_Darmor_BZH_scaffold_45p00060 Brassica napus HOM05D008465 ORTHO05D010905 1.0e-06 60.1 48 56.2
BolC9t56734H Brassica oleracea HOM05D008465 ORTHO05D010905 1.3e-06 59.7 65 44.6
Sp3g29530 Schrenkiella parvula HOM05D006837 ORTHO05D009407 1.7e-06 59.3 110 38.2
BolC3t20910H Brassica oleracea HOM05D008629 ORTHO05D012336 2.9e-06 58.5 158 33.5


User provided reference genes

Program Settings