Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G41070 Arabidopsis lyrata HOM05D014270 ORTHO05D010281 2.7e-77 292.0 152 100.0
AL3G40920 Arabidopsis lyrata HOM05D014270 ORTHO05D010281 5.1e-76 287.7 152 98.7
CARHR101550 Cardamine hirsuta HOM05D014270 ORTHO05D010281 3.4e-64 248.4 152 84.2
Carub.0003s2557 Capsella rubella HOM05D014270 ORTHO05D010281 5.9e-64 247.7 152 84.9
Thhalv10002922m.g Eutrema salsugineum HOM05D014270 ORTHO05D010281 4.2e-62 241.5 147 83.0
BolC7t41540H Brassica oleracea HOM05D014270 ORTHO05D010281 1.6e-61 239.6 152 79.6
C07p10740 Brassica napus HOM05D014270 ORTHO05D010281 6.1e-61 237.7 152 78.9
A07p07130 Brassica napus HOM05D014270 ORTHO05D010281 1.8e-60 236.1 152 78.3
Sp3g22820 Schrenkiella parvula HOM05D014270 ORTHO05D010281 1.9e-59 232.6 152 80.3
BraA07t28499Z Brassica rapa HOM05D014270 ORTHO05D010281 1.0e-23 114.0 152 46.7
Ah.08g214800 Amaranthus hybridus HOM05D008330 ORTHO05D010281 1.6e-16 90.1 145 36.6
Atru.chr6.1449 Acer truncatum HOM05D008330 ORTHO05D010281 3.5e-16 89.0 145 35.2
Duzib133G0427 Durio zibethinus HOM05D008330 ORTHO05D010281 7.8e-16 87.8 145 34.5
TAR633G1148 Trochodendron aralioides HOM05D008330 ORTHO05D010281 1.3e-15 87.0 145 33.8
Thecc.01G215900 Theobroma cacao HOM05D008330 ORTHO05D010281 1.9e-14 83.2 145 30.3
Actinidia09458 Actinidia chinensis HOM05D000599 ORTHO05D010281 2.5e-14 82.8 147 34.0
Manes.13G051600 Manihot esculenta HOM05D008330 ORTHO05D010281 2.5e-14 82.8 145 32.4
TAR633G1328 Trochodendron aralioides HOM05D008330 ORTHO05D010281 9.5e-14 80.9 145 32.4
MD05G1166900 Malus domestica HOM05D008330 ORTHO05D010281 8.0e-13 77.8 148 31.8
Oeu064646.1 Olea europaea HOM05D008330 ORTHO05D010281 8.0e-13 77.8 149 30.2
Prupe.8G195400 Prunus persica HOM05D008330 ORTHO05D010281 8.0e-13 77.8 145 33.1
vmacro02798 Vaccinium macrocarpon HOM05D000599 ORTHO05D000554 1.4e-12 77.0 145 34.5
CiPaw.14G039500 Carya illinoinensis HOM05D008330 ORTHO05D010281 3.0e-12 75.9 146 34.9
COL.COLO4_16118 Corchorus olitorius HOM05D008330 ORTHO05D010281 3.0e-12 75.9 145 30.3
FvH4_2g18250 Fragaria vesca HOM05D008330 ORTHO05D010281 6.8e-12 74.7 145 33.8
Manes.12G050200 Manihot esculenta HOM05D008330 ORTHO05D010281 1.2e-11 73.9 145 31.7
Cpa.g.sc8.116 Carica papaya HOM05D001402 ORTHO05D001302 2.0e-11 73.2 134 30.6
Haze_03361 Corylus avellana HOM05D008330 ORTHO05D010281 7.5e-11 71.2 145 32.4
Gohir.A07G091600 Gossypium hirsutum HOM05D008330 ORTHO05D010281 7.5e-11 71.2 145 29.7
Sc05g0001880 Simmondsia chinensis HOM05D008330 ORTHO05D010281 9.8e-11 70.9 145 30.3
Gohir.D07G096300 Gossypium hirsutum HOM05D008330 ORTHO05D010281 1.7e-10 70.1 145 30.3
Gorai.001G103600 Gossypium raimondii HOM05D008330 ORTHO05D010281 1.7e-10 70.1 145 30.3
FAN27G1390 Fragaria x ananassa HOM05D000599 ORTHO05D000554 2.2e-10 69.7 144 31.9
FAN15G3032 Fragaria x ananassa HOM05D008330 ORTHO05D010281 3.7e-10 68.9 145 32.4
Lsat_1_v5_gn_8_89060 Lactuca sativa HOM05D008330 ORTHO05D010281 8.3e-10 67.8 144 32.6
MD10G1156800 Malus domestica HOM05D008330 ORTHO05D010281 8.3e-10 67.8 109 30.3
RcHm_v2.0_Chr6g0283621 Rosa chinensis HOM05D008330 ORTHO05D010281 8.3e-10 67.8 145 32.4
Ca_07505_v3 Cicer arietinum L. HOM05D008330 ORTHO05D010281 1.8e-09 66.6 145 26.2
Cfa010412 Carpinus fangiana HOM05D008330 ORTHO05D010281 5.4e-09 65.1 142 29.6
CiPaw.13G049800 Carya illinoinensis HOM05D008330 ORTHO05D010281 2.0e-08 63.2 145 27.6
Migut.D02518 Erythranthe guttata HOM05D008330 ORTHO05D010281 7.8e-08 61.2 145 26.2
PGSC0003DMG400008729 Solanum tuberosum HOM05D008330 ORTHO05D010281 7.8e-08 61.2 145 26.9
Sopen09g020990 Solanum pennellii HOM05D008330 ORTHO05D010281 1.0e-07 60.8 117 31.6
FvH4_2g18301 Fragaria vesca HOM05D008330 ORTHO05D010281 1.7e-07 60.1 141 29.1
RcHm_v2.0_Chr6g0283651 Rosa chinensis HOM05D008330 ORTHO05D010281 2.3e-07 59.7 141 28.4
Sabra02G0188500 Salix brachista HOM05D001402 ORTHO05D001302 1.9e-06 56.6 143 26.6


User provided reference genes

Program Settings