Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G40860 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 1.5e-39 165.6 77 100.0
AT3G25170 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 9.3e-34 146.4 77 88.3
Thhalv10002753m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 8.7e-24 113.2 74 67.6
Sp3g22770 Schrenkiella parvula HOM05D008462 ORTHO05D010511 2.6e-20 101.7 74 66.2
A07p07140 Brassica napus HOM05D008462 ORTHO05D010511 5.0e-19 97.4 73 63.0
BraA07t28500Z Brassica rapa HOM05D008462 ORTHO05D010511 5.0e-19 97.4 73 63.0
BcaC06g35797 Brassica carinata HOM05D008462 ORTHO05D010511 2.7e-17 91.7 73 60.3
C07p10750 Brassica napus HOM05D008462 ORTHO05D010511 2.7e-17 91.7 73 60.3
BolC7t41541H Brassica oleracea HOM05D008462 ORTHO05D010511 2.7e-17 91.7 73 60.3
AT2G19030 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 1.9e-15 85.5 75 53.3
AL3G52890 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 5.7e-15 84.0 75 52.0
AT2G19045 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 5.7e-15 84.0 75 53.3
Aa31sc95G170 Aethionema arabicum HOM05D008462 ORTHO05D010511 1.3e-14 82.8 76 53.9
AT2G19040 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 1.6e-14 82.4 75 52.0
AL3G52880 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 3.7e-14 81.3 73 53.4
Thhalv10002869m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 3.7e-14 81.3 74 58.1
Carub.0003s3328 Capsella rubella HOM05D008462 ORTHO05D010511 1.1e-13 79.7 75 52.0
Carub.0003s3341 Capsella rubella HOM05D008462 ORTHO05D010511 2.4e-13 78.6 75 50.7
CARHR101510 Cardamine hirsuta HOM05D008462 ORTHO05D010511 5.3e-13 77.4 78 57.7
Thhalv10026849m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 5.3e-13 77.4 73 46.6
Carub.0003s2550 Capsella rubella HOM05D008462 ORTHO05D010511 2.0e-12 75.5 76 53.9
CARHR101500 Cardamine hirsuta HOM05D008462 ORTHO05D010511 2.6e-12 75.1 74 51.4
AL9U11140 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 1.3e-11 72.8 74 47.3
Sp3g32450 Schrenkiella parvula HOM05D008462 ORTHO05D010511 1.7e-11 72.4 75 46.7
AT2G19020 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 2.2e-11 72.0 75 49.3
BcaC06g30601 Brassica carinata HOM05D008462 ORTHO05D010511 2.2e-11 72.0 74 52.7
BolC7t45511H Brassica oleracea HOM05D008462 ORTHO05D010511 2.2e-11 72.0 74 54.1
AL3G40850 Arabidopsis lyrata HOM05D008462 ORTHO05D010511 2.9e-11 71.6 75 52.0
BcaC06g30603 Brassica carinata HOM05D008462 ORTHO05D010511 8.5e-11 70.1 75 53.3
BcaB06g28566 Brassica carinata HOM05D008462 ORTHO05D010511 1.4e-10 69.3 73 50.7
BcaNung02684 Brassica carinata HOM05D008462 ORTHO05D010511 1.4e-10 69.3 74 51.4
C07p50070 Brassica napus HOM05D008462 ORTHO05D010511 1.4e-10 69.3 74 51.4
AT3G25165 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 3.2e-10 68.2 75 54.7
AT4G13075 Arabidopsis thaliana HOM05D008462 ORTHO05D010511 3.2e-10 68.2 74 45.9
BraA03t14245Z Brassica rapa HOM05D008462 ORTHO05D010511 3.2e-10 68.2 74 51.4
Thhalv10023138m.g Eutrema salsugineum HOM05D008462 ORTHO05D010511 9.4e-10 66.6 75 46.7
CARHR101490 Cardamine hirsuta HOM05D008462 ORTHO05D010511 1.2e-09 66.2 75 50.7
THA.LOC109116491 Tarenaya hassleriana HOM05D008462 ORTHO05D010511 2.7e-09 65.1 48 52.1
BcaB04g21014 Brassica carinata HOM05D023045 ORTHO05D024329 2.3e-08 62.0 73 42.5
CARHR109540 Cardamine hirsuta HOM05D008462 ORTHO05D010511 5.1e-08 60.8 74 41.9
BcaB03g16703 Brassica carinata HOM05D000065 ORTHO05D000162 2.0e-07 58.9 66 42.4
BcaC09g48311 Brassica carinata HOM05D023045 ORTHO05D024329 5.7e-07 57.4 76 43.4
BolC1t05106H Brassica oleracea HOM05D023045 ORTHO05D024329 5.7e-07 57.4 76 43.4
BolC7t45509H Brassica oleracea HOM05D000817 ORTHO05D000702 9.7e-07 56.6 72 50.0
A01p40150 Brassica napus HOM05D023045 ORTHO05D024329 1.3e-06 56.2 76 46.1
BraA01t04055Z Brassica rapa HOM05D023045 ORTHO05D024329 1.3e-06 56.2 76 46.1
Eucgr.L02597 Eucalyptus grandis HOM05D009215 ORTHO05D010511 1.7e-06 55.8 73 41.1
Gorai.003G164100 Gossypium raimondii HOM05D009215 ORTHO05D010851 3.7e-06 54.7 74 40.5
CARHR105300 Cardamine hirsuta HOM05D008462 ORTHO05D010511 6.3e-06 53.9 56 41.1
Eucgr.L02596 Eucalyptus grandis HOM05D008462 ORTHO05D010511 6.3e-06 53.9 75 38.7
Eucgr.E01762 Eucalyptus grandis HOM05D009215 ORTHO05D010511 8.2e-06 53.5 73 38.4


User provided reference genes

Program Settings