Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G40810 Arabidopsis lyrata HOM05D006799 ORTHO05D008391 8.8e-102 373.6 190 100.0
AT3G25120 Arabidopsis thaliana HOM05D006799 ORTHO05D008391 7.2e-96 354.0 190 95.3
Carub.0003s2545 Capsella rubella HOM05D006799 ORTHO05D008391 7.2e-96 354.0 189 93.7
CARHR101440 Cardamine hirsuta HOM05D006799 ORTHO05D008391 5.2e-86 321.2 188 85.1
Thhalv10002682m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 5.8e-77 291.2 189 78.8
A07p07240 Brassica napus HOM05D006799 ORTHO05D008391 9.8e-77 290.4 189 77.8
BcaC06g35782 Brassica carinata HOM05D006799 ORTHO05D008391 2.9e-76 288.9 189 77.8
BolC7t41559H Brassica oleracea HOM05D006799 ORTHO05D008391 7.1e-75 284.3 190 77.4
C07p10930 Brassica napus HOM05D006799 ORTHO05D008391 1.6e-74 283.1 190 76.8
BraA07t28510Z Brassica rapa HOM05D006799 ORTHO05D008391 2.1e-74 282.7 189 76.2
Sp3g22710 Schrenkiella parvula HOM05D006799 ORTHO05D008391 3.5e-74 282.0 189 75.7
THA.LOC104804623 Tarenaya hassleriana HOM05D006799 ORTHO05D008391 2.6e-69 265.8 192 68.8
Aa31LG9G5010 Aethionema arabicum HOM05D006799 ORTHO05D008391 2.2e-68 262.7 192 69.8
BcaB06g26722 Brassica carinata HOM05D006799 ORTHO05D008391 1.1e-67 260.4 189 73.0
BcaB03g16157 Brassica carinata HOM05D006799 ORTHO05D008391 3.2e-59 232.3 181 63.5
A04p08990 Brassica napus HOM05D006799 ORTHO05D008391 3.2e-59 232.3 185 62.2
BraA04t16594Z Brassica rapa HOM05D006799 ORTHO05D008391 3.2e-59 232.3 185 62.2
C04p42860 Brassica napus HOM05D006799 ORTHO05D008391 5.4e-59 231.5 190 64.7
BcaC02g09450 Brassica carinata HOM05D006799 ORTHO05D008391 1.6e-58 229.9 190 64.2
BolC4t25853H Brassica oleracea HOM05D006799 ORTHO05D008391 2.1e-58 229.6 190 65.3
CARHR218390 Cardamine hirsuta HOM05D006799 ORTHO05D008391 2.1e-58 229.6 180 66.1
Thhalv10026882m.g Eutrema salsugineum HOM05D006799 ORTHO05D008391 8.4e-52 207.6 189 59.8
PGR044G2699 Punica granatum HOM05D006799 ORTHO05D008391 8.4e-52 207.6 201 55.7
Cpa.g.sc21.107 Carica papaya HOM05D006799 ORTHO05D008391 9.3e-51 204.1 161 62.1
ClCG09G008610 Citrullus lanatus HOM05D006799 ORTHO05D008391 2.7e-50 202.6 196 55.1
CsaV3_7G026360 Cucumis sativus L. HOM05D006799 ORTHO05D008391 1.7e-49 199.9 197 55.3
Eucgr.K02137 Eucalyptus grandis HOM05D006799 ORTHO05D008391 2.3e-49 199.5 160 63.8
Sed0008494 Sechium edule HOM05D006799 ORTHO05D008391 7.3e-48 194.5 182 55.5
COL.COLO4_15616 Corchorus olitorius HOM05D006799 ORTHO05D008391 2.1e-47 193.0 186 55.9
Dinv12648 Davidia involucrata HOM05D006799 ORTHO05D008391 2.1e-47 193.0 173 58.4
Sc17g0002120 Simmondsia chinensis HOM05D006799 ORTHO05D008391 2.1e-47 193.0 178 58.4
Thecc.01G219900 Theobroma cacao HOM05D006799 ORTHO05D008391 2.1e-47 193.0 166 63.3
Actinidia23709 Actinidia chinensis HOM05D006799 ORTHO05D008391 8.1e-47 191.0 173 60.1
Hund05578 Selenicereus undatus HOM05D006799 ORTHO05D008391 8.1e-47 191.0 184 53.8
Potri.002G246000 Populus trichocarpa HOM05D006799 ORTHO05D008391 1.1e-46 190.7 170 57.6
Migut.N00632 Erythranthe guttata HOM05D006799 ORTHO05D008391 1.4e-46 190.3 189 55.6
Hma1.2p1_0226F.1_g095380 Hydrangea macrophylla HOM05D006799 ORTHO05D008391 1.4e-46 190.3 196 52.6
Manes.13G049500 Manihot esculenta HOM05D006799 ORTHO05D008391 1.4e-46 190.3 199 53.8
TAR362G0955 Trochodendron aralioides HOM05D006799 ORTHO05D008391 1.4e-46 190.3 174 56.9
Ciclev10022385m.g Citrus clementina HOM05D006799 ORTHO05D008391 2.4e-46 189.5 167 56.9
Sabra02G0187300 Salix brachista HOM05D006799 ORTHO05D008391 3.1e-46 189.1 192 54.7
MELO3C021082.2 Cucumis melo HOM05D006799 ORTHO05D008391 4.0e-46 188.7 207 52.7
TWI18G0944 Tripterygium wilfordii HOM05D006799 ORTHO05D008391 4.0e-46 188.7 183 55.7
EL10Ac5g12475 Beta vulgaris HOM05D006799 ORTHO05D008391 9.0e-46 187.6 164 57.9
CANSAT01G3095 Cannabis sativa HOM05D006799 ORTHO05D008391 9.0e-46 187.6 189 55.0
Peaxi162Scf00068g02310 Petunia axillaris HOM05D006799 ORTHO05D008391 2.0e-45 186.4 170 58.2
Atru.chr6.1426 Acer truncatum HOM05D006799 ORTHO05D008391 3.4e-45 185.7 195 52.3
Nitab4.5_0000045g0540 Nicotiana tabacum HOM05D006799 ORTHO05D008391 3.4e-45 185.7 167 59.9
Nitab4.5_0002641g0110 Nicotiana tabacum HOM05D006799 ORTHO05D008391 3.4e-45 185.7 190 54.7
DCAR_012670 Daucus carota HOM05D006799 ORTHO05D008391 5.8e-45 184.9 185 54.1
QL09p051225 Quercus lobata HOM05D006799 ORTHO05D008391 5.8e-45 184.9 202 51.5
CiPaw.02G023800 Carya illinoinensis HOM05D006799 ORTHO05D008391 9.9e-45 184.1 172 55.8
Gohir.A07G093200 Gossypium hirsutum HOM05D006799 ORTHO05D008391 9.9e-45 184.1 184 56.5
CAN.G181.54 Capsicum annuum HOM05D006799 ORTHO05D008391 1.7e-44 183.3 167 58.7
Gorai.001G105200 Gossypium raimondii HOM05D006799 ORTHO05D008391 1.7e-44 183.3 184 56.0
Sopen06g002680 Solanum pennellii HOM05D006799 ORTHO05D008391 1.7e-44 183.3 167 59.3
Gohir.D07G097800 Gossypium hirsutum HOM05D006799 ORTHO05D008391 2.2e-44 183.0 184 56.0
Lj1C89G17 Lonicera japonica HOM05D006799 ORTHO05D008391 2.2e-44 183.0 165 57.6
SGA_v2.0_scaffold6G03220 Striga asiatica HOM05D006799 ORTHO05D008391 2.2e-44 183.0 163 62.0
Solyc06g007800.4 Solanum lycopersicum HOM05D006799 ORTHO05D008391 2.9e-44 182.6 167 59.3
MSTRG.17994 Avicennia marina HOM05D006799 ORTHO05D008391 3.8e-44 182.2 192 52.6
PGSC0003DMG400022033 Solanum tuberosum HOM05D006799 ORTHO05D008391 6.4e-44 181.4 167 58.1
Haze_15251 Corylus avellana HOM05D006799 ORTHO05D008391 8.4e-44 181.0 194 51.5
GSVIVG01003251001 Vitis vinifera HOM05D006799 ORTHO05D008391 1.4e-43 180.3 167 56.3
CSS0002557 Camellia sinensis var. sinensis HOM05D006799 ORTHO05D008391 1.9e-43 179.9 173 55.5
FAN24G0472 Fragaria x ananassa HOM05D004056 ORTHO05D008391 1.9e-43 179.9 203 49.3
MBI11_g07417_MAGBIO Magnolia biondii HOM05D006799 ORTHO05D008391 1.9e-43 179.9 172 54.7
Cc01_g16700 Coffea canephora HOM05D006799 ORTHO05D008391 5.5e-43 178.3 199 50.3
Prupe.8G198800 Prunus persica HOM05D006799 ORTHO05D008391 5.5e-43 178.3 202 49.5
Rhsim01G0253200 Rhododendron simsii HOM05D006799 ORTHO05D008391 5.5e-43 178.3 173 55.5
unitig_0.g374 Utricularia gibba HOM05D006799 ORTHO05D008391 7.1e-43 177.9 180 52.2
Duzib138G1661 Durio zibethinus HOM05D006799 ORTHO05D008391 9.3e-43 177.6 161 59.0
FvH4_2g18530 Fragaria vesca HOM05D006799 ORTHO05D008391 9.3e-43 177.6 203 48.8
FAN15G2777 Fragaria x ananassa HOM05D004056 ORTHO05D008391 1.2e-42 177.2 203 48.8
Aqoxy5G00028 Aquilegia oxysepala HOM05D006799 ORTHO05D008391 2.1e-42 176.4 174 54.0
AUR62019885 Chenopodium quinoa HOM05D006799 ORTHO05D008391 3.5e-42 175.6 164 53.0
AUR62007023 Chenopodium quinoa HOM05D006799 ORTHO05D008391 4.6e-42 175.3 164 53.0
Dinv19171 Davidia involucrata HOM05D006799 ORTHO05D008391 6.0e-42 174.9 154 61.7
MD10G1159700 Malus domestica HOM05D006799 ORTHO05D008391 6.0e-42 174.9 204 49.5
Nitab4.5_0002616g0150 Nicotiana tabacum HOM05D006799 ORTHO05D008391 7.9e-42 174.5 214 49.1
RcHm_v2.0_Chr6g0284091 Rosa chinensis HOM05D006799 ORTHO05D008391 1.3e-41 173.7 203 46.8
arahy.Tifrunner.gnm1.ann1.AR5NL3 Arachis hypogaea HOM05D006799 ORTHO05D008391 3.9e-41 172.2 195 50.3
MD05G1171500 Malus domestica HOM05D006799 ORTHO05D008391 5.1e-41 171.8 204 48.5
SalBow3G4070 Salvia bowleyana HOM05D006799 ORTHO05D008391 5.1e-41 171.8 194 50.0
Os04g0376100 Oryza sativa ssp. japonica HOM05D006799 ORTHO05D008391 1.1e-40 170.6 182 51.1
arahy.Tifrunner.gnm1.ann1.H272JM Arachis hypogaea HOM05D006799 ORTHO05D008391 2.5e-40 169.5 195 49.2
Cfa004160 Carpinus fangiana HOM05D006799 ORTHO05D008391 3.3e-40 169.1 162 54.9
Zm00001eb086040 Zea mays HOM05D006799 ORTHO05D008391 1.3e-39 167.2 157 57.3
CDE05G2155 Ceratophyllum demersum HOM05D006799 ORTHO05D008391 4.8e-39 165.2 173 50.3
vmacro14734 Vaccinium macrocarpon HOM05D006799 ORTHO05D008391 6.2e-39 164.9 221 44.8
PSO063G5306 Papaver somniferum HOM05D006799 ORTHO05D008391 1.8e-38 163.3 169 51.5
Psat4g203520 Pisum sativum HOM05D006799 ORTHO05D008391 2.4e-38 162.9 195 49.7
VMungo0331G1591 Vigna mungo HOM05D006799 ORTHO05D008391 6.9e-38 161.4 205 48.3
Lalb_Chr12g0209871 Lupinus albus HOM05D006799 ORTHO05D008391 1.2e-37 160.6 195 48.2
Glyma.17G151300 Glycine max HOM05D006799 ORTHO05D008391 5.8e-37 158.3 195 47.7
TPR.G11194 Trifolium pratense HOM05D006799 ORTHO05D008391 1.3e-36 157.1 164 51.8
Lsat_1_v5_gn_8_89340 Lactuca sativa HOM05D006799 ORTHO05D008391 1.7e-36 156.8 156 53.2
Ah.12g052960 Amaranthus hybridus HOM05D006799 ORTHO05D008391 2.2e-36 156.4 197 44.7
ECA236G1739 Erigeron canadensis HOM05D006799 ORTHO05D008391 2.2e-36 156.4 157 52.9
Lj3g0009647 Lotus japonicus HOM05D006799 ORTHO05D008391 6.5e-36 154.8 205 45.4
Medtr8g012725 Medicago truncatula HOM05D006799 ORTHO05D008391 1.4e-35 153.7 164 52.4
Phvul.010G021800 Phaseolus vulgaris HOM05D006799 ORTHO05D008391 4.2e-35 152.1 200 44.0
HanXRQChr16g0500591 Helianthus annuus HOM05D006799 ORTHO05D008391 3.9e-33 145.6 156 49.4
ATR0561G177 Amborella trichopoda HOM05D006799 ORTHO05D008391 6.7e-33 144.8 175 45.1
Ca_23225_v3 Cicer arietinum L. HOM05D006799 ORTHO05D008391 4.3e-32 142.1 154 50.0
Peaxi162Scf00372g01214 Petunia axillaris HOM05D006799 ORTHO05D008391 3.2e-27 125.9 118 55.9
SEGI_12663 Sequoiadendron giganteum HOM05D006799 ORTHO05D008391 6.1e-26 121.7 178 41.6
FAN27G1455 Fragaria x ananassa HOM05D006799 ORTHO05D008391 3.3e-24 115.9 124 51.6
Sc17g0002130 Simmondsia chinensis HOM05D006799 ORTHO05D008391 5.7e-24 115.2 97 63.9
arahy.Tifrunner.gnm1.ann1.9RT6YB Arachis hypogaea HOM05D006799 ORTHO05D008391 7.9e-18 94.7 114 48.2
Mapoly0010s0131 Marchantia polymorpha HOM05D006799 ORTHO05D008391 1.4e-17 94.0 140 39.3
AagrBONN_evm.TU.Sc2ySwM_228.181 Anthoceros agrestis HOM05D006799 ORTHO05D008391 1.3e-15 87.4 179 35.8
Pp3c22_13870 Physcomitrium patens HOM05D006799 ORTHO05D008391 3.4e-13 79.3 203 32.0
Rhsim01G0253100 Rhododendron simsii HOM05D006799 ORTHO05D008391 3.8e-12 75.9 96 43.8
CBR_g52029 Chara braunii HOM05D006799 ORTHO05D008391 2.5e-11 73.2 104 42.3


User provided reference genes

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