Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G39180 Arabidopsis lyrata HOM05D018383 ORTHO05D019711 1.3e-126 456.4 234 100.0
AL3G39210 Arabidopsis lyrata HOM05D018383 ORTHO05D019711 1.7e-83 313.2 244 71.3
AT3G24093 Arabidopsis thaliana HOM05D018383 ORTHO05D019711 2.5e-50 203.0 244 52.0
Carub.0003s2442 Capsella rubella HOM05D018383 ORTHO05D019711 4.1e-48 195.7 245 48.6
CARHR100110 Cardamine hirsuta HOM05D018383 ORTHO05D019711 4.2e-29 132.5 141 55.3
AT3G22961 Arabidopsis thaliana HOM05D009514 ORTHO05D011701 1.6e-12 77.4 128 35.2
AL3G37360 Arabidopsis lyrata HOM05D009514 ORTHO05D011701 1.5e-10 70.9 127 34.6
Thhalv10021946m.g Eutrema salsugineum HOM05D009514 ORTHO05D011701 1.5e-10 70.9 76 40.8
Carub.0003s2311 Capsella rubella HOM05D009514 ORTHO05D011701 2.0e-10 70.5 86 39.5
A06p30640 Brassica napus HOM05D009514 ORTHO05D011701 1.7e-06 57.4 120 33.3
A06p30660 Brassica napus HOM05D009514 ORTHO05D011701 1.7e-06 57.4 120 33.3
A06p30690 Brassica napus HOM05D009514 ORTHO05D011701 1.7e-06 57.4 120 33.3
A06p30720 Brassica napus HOM05D009514 ORTHO05D011701 1.7e-06 57.4 120 33.3
BraA06t26014Z Brassica rapa HOM05D009514 ORTHO05D011701 1.7e-06 57.4 120 33.3
CARHR252650 Cardamine hirsuta HOM05D018383 ORTHO05D019711 2.9e-06 56.6 108 41.7


User provided reference genes

Program Settings