Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G37770 Arabidopsis lyrata HOM05D008295 ORTHO05D010471 5.7e-39 163.7 78 100.0
AT3G23165 Arabidopsis thaliana HOM05D008295 ORTHO05D010471 1.4e-32 142.5 78 83.3
AT3G04943 Arabidopsis thaliana HOM05D008295 ORTHO05D010471 8.6e-19 96.7 82 62.2
AT3G04945 Arabidopsis thaliana HOM05D008295 ORTHO05D010471 6.1e-17 90.5 79 59.5
AL3G15270 Arabidopsis lyrata HOM05D008295 ORTHO05D010471 4.0e-16 87.8 82 59.8
Thhalv10022226m.g Eutrema salsugineum HOM05D008295 ORTHO05D010471 5.2e-16 87.4 78 57.7
AL3G37780 Arabidopsis lyrata HOM05D008295 ORTHO05D010471 9.8e-15 83.2 82 56.1
AL3G15280 Arabidopsis lyrata HOM05D008295 ORTHO05D010471 4.9e-14 80.9 79 54.4
BcaC01g04340 Brassica carinata HOM05D008295 ORTHO05D010471 8.3e-14 80.1 75 57.3
C03p41320 Brassica napus HOM05D008295 ORTHO05D010471 8.3e-14 80.1 75 57.3
BolC3t16414H Brassica oleracea HOM05D008295 ORTHO05D010471 8.3e-14 80.1 75 57.3
A03p33940 Brassica napus HOM05D008295 ORTHO05D010471 1.1e-13 79.7 75 56.0
BraA03t12569Z Brassica rapa HOM05D008295 ORTHO05D010471 1.1e-13 79.7 75 56.0
C05p62360 Brassica napus HOM05D008295 ORTHO05D010471 1.4e-13 79.3 75 52.0
C05p62380 Brassica napus HOM05D008295 ORTHO05D010471 1.4e-13 79.3 75 52.0
BcaC03g15093 Brassica carinata HOM05D008295 ORTHO05D010471 1.8e-13 79.0 75 52.0
C05p62320 Brassica napus HOM05D008295 ORTHO05D010471 1.8e-13 79.0 75 52.0
BcaC05g29971 Brassica carinata HOM05D008295 ORTHO05D010471 2.4e-13 78.6 75 52.0
A05p42650 Brassica napus HOM05D008295 ORTHO05D010471 2.4e-13 78.6 75 52.0
BraA05t22988Z Brassica rapa HOM05D008295 ORTHO05D010471 2.4e-13 78.6 75 52.0
A02p15960 Brassica napus HOM05D008295 ORTHO05D010471 3.2e-13 78.2 75 52.0
C02p26540 Brassica napus HOM05D008295 ORTHO05D010471 3.2e-13 78.2 75 52.0
BolC2t08725H Brassica oleracea HOM05D008295 ORTHO05D010471 3.2e-13 78.2 75 52.0
Carub.0003s2338 Capsella rubella HOM05D008295 ORTHO05D010471 3.2e-13 78.2 81 51.9
BcaC05g29923 Brassica carinata HOM05D008295 ORTHO05D010471 4.1e-13 77.8 75 52.0
BcaC05g29925 Brassica carinata HOM05D008295 ORTHO05D010471 7.0e-13 77.0 75 50.7
BolC5t34892H Brassica oleracea HOM05D008295 ORTHO05D010471 7.0e-13 77.0 75 50.7
A05p42640 Brassica napus HOM05D008295 ORTHO05D010471 9.2e-13 76.6 75 50.7
BraA05t22987Z Brassica rapa HOM05D008295 ORTHO05D010471 9.2e-13 76.6 75 50.7
BraA05t22989Z Brassica rapa HOM05D008295 ORTHO05D010471 9.2e-13 76.6 75 50.7
AT2G14935 Arabidopsis thaliana HOM05D008295 ORTHO05D010471 2.7e-12 75.1 81 48.1
BraA02t06655Z Brassica rapa HOM05D008295 ORTHO05D010471 2.7e-12 75.1 75 50.7
BolC5t34888H Brassica oleracea HOM05D008295 ORTHO05D010471 1.0e-11 73.2 76 51.3
AT3G23167 Arabidopsis thaliana HOM05D008295 ORTHO05D010471 1.1e-10 69.7 84 48.8
BcaC01g04341 Brassica carinata HOM05D008295 ORTHO05D010471 1.1e-10 69.7 78 51.3
A03p33930 Brassica napus HOM05D008295 ORTHO05D010471 1.1e-10 69.7 78 50.0
C03p41310 Brassica napus HOM05D008295 ORTHO05D010471 1.1e-10 69.7 78 51.3
BraA03t12568Z Brassica rapa HOM05D008295 ORTHO05D010471 1.1e-10 69.7 78 50.0
BolC3t16413H Brassica oleracea HOM05D008295 ORTHO05D010471 2.5e-10 68.6 78 51.3
BcaB05g24460 Brassica carinata HOM05D008295 ORTHO05D010471 3.3e-10 68.2 75 46.7
CARHR079250 Cardamine hirsuta HOM05D008295 ORTHO05D010471 1.6e-09 65.9 79 48.1
CSS0021153 Camellia sinensis var. sinensis HOM05D008295 ORTHO05D010471 4.0e-08 61.2 78 38.5
BcaB04g19287 Brassica carinata HOM05D008295 ORTHO05D010471 5.2e-08 60.8 75 41.3
CSS0043617 Camellia sinensis var. sinensis HOM05D008295 ORTHO05D010471 5.8e-07 57.4 80 41.2
C05p62350 Brassica napus HOM05D008295 ORTHO05D010471 3.7e-06 54.7 75 41.3


User provided reference genes

Program Settings