Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G36480 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 6.3e-31 136.7 66 100.0
AT3G22240 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 3.0e-17 91.3 51 84.3
AL3G36500 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 1.2e-16 89.4 51 82.4
AT3G22231 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 1.5e-16 89.0 51 82.4
AT3G22235 Arabidopsis thaliana HOM05D002385 ORTHO05D002245 1.5e-16 89.0 51 82.4
Carub.0003s2241 Capsella rubella HOM05D002385 ORTHO05D002245 3.4e-16 87.8 51 82.4
CARHR098140 Cardamine hirsuta HOM05D002385 ORTHO05D002245 4.1e-14 80.9 42 90.5
Carub.0003s2240 Capsella rubella HOM05D002385 ORTHO05D002245 5.4e-14 80.5 53 73.6
CARHR098150 Cardamine hirsuta HOM05D002385 ORTHO05D002245 5.4e-14 80.5 51 74.5
Sp3g20030 Schrenkiella parvula HOM05D002385 ORTHO05D002245 4.3e-11 70.9 53 71.7
AL3G36490 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 7.3e-11 70.1 55 67.3
Carub.0224s0002 Capsella rubella HOM05D002385 ORTHO05D002245 9.5e-11 69.7 43 83.7
BcaC09g49159 Brassica carinata HOM05D002385 ORTHO05D002245 2.1e-10 68.6 51 66.7
CARHR150690 Cardamine hirsuta HOM05D002385 ORTHO05D002245 2.1e-10 68.6 43 79.1
BcaB04g20534 Brassica carinata HOM05D002385 ORTHO05D002245 3.6e-10 67.8 41 80.5
Carub.0224s0001 Capsella rubella HOM05D002385 ORTHO05D002245 1.8e-09 65.5 42 78.6
Thhalv10021881m.g Eutrema salsugineum HOM05D002385 ORTHO05D002245 1.8e-09 65.5 53 66.0
BcaB06g26327 Brassica carinata HOM05D002385 ORTHO05D002245 3.1e-09 64.7 40 77.5
BcaC04g19478 Brassica carinata HOM05D002385 ORTHO05D002245 5.2e-09 63.9 46 69.6
BcaC04g19479 Brassica carinata HOM05D002385 ORTHO05D002245 5.2e-09 63.9 46 69.6
A01p32930 Brassica napus HOM05D002385 ORTHO05D002245 5.2e-09 63.9 55 61.8
BraA01t03414Z Brassica rapa HOM05D002385 ORTHO05D002245 5.2e-09 63.9 55 61.8
A10p19200 Brassica napus HOM05D002385 ORTHO05D002245 8.9e-09 63.2 41 75.6
C09p55310 Brassica napus HOM05D002385 ORTHO05D002245 8.9e-09 63.2 41 75.6
C09p55320 Brassica napus HOM05D002385 ORTHO05D002245 8.9e-09 63.2 41 75.6
BolC9t58392H Brassica oleracea HOM05D002385 ORTHO05D002245 8.9e-09 63.2 41 75.6
BolC9t58393H Brassica oleracea HOM05D002385 ORTHO05D033827 8.9e-09 63.2 41 75.6
BolC9t58394H Brassica oleracea HOM05D002385 ORTHO05D002245 8.9e-09 63.2 41 75.6
BraA10t43997Z Brassica rapa HOM05D002385 ORTHO05D002245 8.9e-09 63.2 41 75.6
BraA10t43998Z Brassica rapa HOM05D002385 ORTHO05D002245 8.9e-09 63.2 41 75.6
Aa31LG8G8820 Aethionema arabicum HOM05D002385 ORTHO05D002245 1.2e-08 62.8 57 57.9
C01p42010 Brassica napus HOM05D002385 ORTHO05D002245 1.2e-08 62.8 41 73.2
BcaC01g03458 Brassica carinata HOM05D002385 ORTHO05D002245 1.5e-08 62.4 46 69.6
C05p41120 Brassica napus HOM05D002385 ORTHO05D002245 2.0e-08 62.0 45 68.9
BcaB08g37322 Brassica carinata HOM05D002385 ORTHO05D002245 2.6e-08 61.6 46 67.4
BolC1t05607H Brassica oleracea HOM05D002385 ORTHO05D002245 2.6e-08 61.6 41 73.2
BolC5t32855H Brassica oleracea HOM05D002385 ORTHO05D002245 3.4e-08 61.2 40 75.0
AL3G36460 Arabidopsis lyrata HOM05D002385 ORTHO05D002245 4.4e-08 60.8 54 68.5
C03p52250 Brassica napus HOM05D002385 ORTHO05D002245 4.4e-08 60.8 43 72.1
BolC3t17506H Brassica oleracea HOM05D002385 ORTHO05D002245 4.4e-08 60.8 43 72.1
BcaB06g27517 Brassica carinata HOM05D002385 ORTHO05D002245 2.9e-07 58.2 43 69.8
A03p42660 Brassica napus HOM05D002385 ORTHO05D002245 7.0e-06 53.5 46 58.7


User provided reference genes

Program Settings