Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G36080 Arabidopsis lyrata HOM05D000310 ORTHO05D080231 1.3e-50 203.0 119 100.0
Carub.0003s2197 Capsella rubella HOM05D000310 ORTHO05D002327 2.8e-37 158.7 102 81.4
CARHR097860 Cardamine hirsuta HOM05D000310 ORTHO05D002327 1.3e-34 149.8 101 73.3
Aa31LG8G8460 Aethionema arabicum HOM05D000310 ORTHO05D002327 2.5e-33 145.6 101 73.3
Sp3g19870 Schrenkiella parvula HOM05D000310 ORTHO05D002327 7.4e-30 134.0 100 69.0
THA.LOC104822287 Tarenaya hassleriana HOM05D000310 ORTHO05D002327 2.8e-29 132.1 101 65.3
Carub.0007s2672 Capsella rubella HOM05D000310 ORTHO05D002327 8.4e-26 120.6 102 62.7
AT4G15240 Arabidopsis thaliana HOM05D000310 ORTHO05D002327 1.4e-25 119.8 102 61.8
Thhalv10025038m.g Eutrema salsugineum HOM05D000310 ORTHO05D002327 3.2e-25 118.6 102 60.8
Sp7g13450 Schrenkiella parvula HOM05D000310 ORTHO05D002327 7.2e-25 117.5 98 62.2
AL7G40410 Arabidopsis lyrata HOM05D000310 ORTHO05D002327 9.3e-25 117.1 102 60.8
CARHR221960 Cardamine hirsuta HOM05D000310 ORTHO05D002327 1.6e-24 116.3 104 60.6
A01p22310 Brassica napus HOM05D000310 ORTHO05D002327 1.1e-20 103.6 94 58.5
BraA01t02146Z Brassica rapa HOM05D000310 ORTHO05D002327 1.1e-20 103.6 94 58.5
BcaC09g50205 Brassica carinata HOM05D000310 ORTHO05D002327 1.4e-20 103.2 68 73.5
C01p27840 Brassica napus HOM05D000310 ORTHO05D002327 1.4e-20 103.2 68 73.5
BcaNung00294 Brassica carinata HOM05D000310 ORTHO05D002327 4.1e-20 101.7 99 56.6
BolC1t02718H Brassica oleracea HOM05D000310 ORTHO05D002327 4.1e-20 101.7 68 72.1
BcaC06g32924 Brassica carinata HOM05D000310 ORTHO05D002327 5.9e-19 97.8 93 57.0
BcaC06g33399 Brassica carinata HOM05D000310 ORTHO05D002327 1.9e-17 92.8 95 55.8
C07p47070 Brassica napus HOM05D000310 ORTHO05D002327 1.9e-17 92.8 95 55.8
A03p48960 Brassica napus HOM05D000310 ORTHO05D002327 2.5e-17 92.4 99 53.5
BraA03t13997Z Brassica rapa HOM05D000310 ORTHO05D002327 2.5e-17 92.4 99 53.5
BolC7t45226H Brassica oleracea HOM05D000310 ORTHO05D002327 3.6e-16 88.6 102 52.9
CANSAT64G0458 Cannabis sativa HOM05D000310 ORTHO05D002327 8.5e-10 67.4 76 48.7
Prupe.3G221200 Prunus persica HOM05D000310 ORTHO05D002327 8.5e-10 67.4 75 49.3
Ciclev10015015m.g Citrus clementina HOM05D000310 ORTHO05D002327 1.4e-09 66.6 48 68.8
ClCG02G001750 Citrullus lanatus HOM05D000310 ORTHO05D002327 1.9e-09 66.2 61 55.7
Lalb_Chr03g0028911 Lupinus albus HOM05D000310 ORTHO05D002327 1.9e-09 66.2 61 54.1
RcHm_v2.0_Chr2g0160181 Rosa chinensis HOM05D000310 ORTHO05D002327 1.9e-09 66.2 47 68.1
Sed0016226 Sechium edule HOM05D000310 ORTHO05D002327 1.9e-09 66.2 45 71.1
Sed0021530 Sechium edule HOM05D000310 ORTHO05D002327 1.9e-09 66.2 60 58.3
CiPaw.04G118300 Carya illinoinensis HOM05D000310 ORTHO05D002327 2.5e-09 65.9 48 66.7
VMungo1127G1633 Vigna mungo HOM05D000310 ORTHO05D002327 2.5e-09 65.9 55 60.0
Ca_19104_v3 Cicer arietinum L. HOM05D000310 ORTHO05D002327 4.2e-09 65.1 43 69.8
Glyma.12G101500 Glycine max HOM05D000310 ORTHO05D002327 5.5e-09 64.7 57 57.9
Phvul.011G107433 Phaseolus vulgaris HOM05D000310 ORTHO05D002327 5.5e-09 64.7 44 68.2
COL.COLO4_12980 Corchorus olitorius HOM05D000310 ORTHO05D002327 9.4e-09 63.9 57 57.9
FvH4_6g43591 Fragaria vesca HOM05D000310 ORTHO05D002327 9.4e-09 63.9 50 64.0
Gohir.A03G163900 Gossypium hirsutum HOM05D000310 ORTHO05D002327 9.4e-09 63.9 43 69.8
Gohir.D02G187300 Gossypium hirsutum HOM05D000310 ORTHO05D002327 9.4e-09 63.9 43 69.8
Gorai.005G209800 Gossypium raimondii HOM05D000310 ORTHO05D002327 9.4e-09 63.9 43 69.8
Psat7g195240 Pisum sativum HOM05D000310 ORTHO05D002327 1.2e-08 63.5 43 69.8
MD09G1104500 Malus domestica HOM05D000310 ORTHO05D002327 2.1e-08 62.8 57 54.4
Cfa014443 Carpinus fangiana HOM05D000310 ORTHO05D002327 2.7e-08 62.4 42 69.0
MD17G1092100 Malus domestica HOM05D000310 ORTHO05D002327 2.7e-08 62.4 57 54.4
MELO3C018800.2 Cucumis melo HOM05D000310 ORTHO05D002327 4.7e-08 61.6 53 58.5
QL08p033905 Quercus lobata HOM05D000310 ORTHO05D002327 4.7e-08 61.6 43 67.4
Potri.017G039500 Populus trichocarpa HOM05D000310 ORTHO05D002327 1.4e-07 60.1 42 61.9
Eucgr.A01724 Eucalyptus grandis HOM05D000310 ORTHO05D002327 1.8e-07 59.7 60 53.3
Lsat_1_v5_gn_8_129441 Lactuca sativa HOM05D000310 ORTHO05D002327 1.8e-07 59.7 63 52.4
Ciclev10017986m.g Citrus clementina HOM05D000310 ORTHO05D002327 2.3e-07 59.3 59 57.6
Cpa.g.sc8.241 Carica papaya HOM05D000310 ORTHO05D002327 3.0e-07 58.9 42 64.3
ECA233G4575 Erigeron canadensis HOM05D000310 ORTHO05D002327 3.9e-07 58.5 48 54.2
Haze_12904 Corylus avellana HOM05D000310 ORTHO05D002327 8.8e-07 57.4 41 61.0
QL01p029212 Quercus lobata HOM05D000310 ORTHO05D002456 8.8e-07 57.4 68 38.2
Sabra17G0026500 Salix brachista HOM05D000310 ORTHO05D002327 8.8e-07 57.4 41 61.0
CSS0050361 Camellia sinensis var. sinensis HOM05D000310 ORTHO05D002327 1.1e-06 57.0 45 60.0
Manes.12G078000 Manihot esculenta HOM05D000310 ORTHO05D002327 1.1e-06 57.0 45 64.4
Haze_24178 Corylus avellana HOM05D000310 ORTHO05D002456 1.5e-06 56.6 81 39.5
Haze_24182 Corylus avellana HOM05D000310 ORTHO05D002456 1.5e-06 56.6 81 39.5
Dinv18534 Davidia involucrata HOM05D000310 ORTHO05D002327 1.5e-06 56.6 43 65.1
MBI02_g35706_MAGBIO Magnolia biondii HOM05D000310 ORTHO05D002327 1.5e-06 56.6 63 47.6
TWI36G1004 Tripterygium wilfordii HOM05D000310 ORTHO05D002327 2.0e-06 56.2 40 62.5
Thecc.02G161900 Theobroma cacao HOM05D000310 ORTHO05D002327 3.3e-06 55.5 43 60.5
EL10Ac9g20642 Beta vulgaris HOM05D000310 ORTHO05D002327 4.4e-06 55.1 65 47.7
CSS0023706 Camellia sinensis var. sinensis HOM05D000310 ORTHO05D002456 4.4e-06 55.1 52 48.1
Cfa011557 Carpinus fangiana HOM05D000310 ORTHO05D002456 4.4e-06 55.1 81 38.3
Medtr4g046680 Medicago truncatula HOM05D000310 ORTHO05D002327 7.4e-06 54.3 43 55.8
DCAR_019776 Daucus carota HOM05D000310 ORTHO05D002327 9.7e-06 53.9 59 45.8
Duzib132G0057 Durio zibethinus HOM05D000310 ORTHO05D002327 9.7e-06 53.9 41 63.4
MD08G1011300 Malus domestica HOM05D000310 ORTHO05D002327 9.7e-06 53.9 62 45.2


User provided reference genes

Program Settings