Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G35800 Arabidopsis lyrata HOM05D010757 ORTHO05D009635 3.1e-60 235.0 120 100.0
AT3G21680 Arabidopsis thaliana HOM05D010757 ORTHO05D009635 7.4e-54 213.8 120 89.2
CARHR097620 Cardamine hirsuta HOM05D010757 ORTHO05D009635 7.7e-43 177.2 124 76.6
C01p42560 Brassica napus HOM05D010757 ORTHO05D009635 1.2e-40 169.9 120 76.7
BolC1t04209H Brassica oleracea HOM05D010757 ORTHO05D009635 1.2e-40 169.9 120 76.7
Carub.0003s2173 Capsella rubella HOM05D010757 ORTHO05D009635 3.6e-40 168.3 122 74.6
BraA01t03447Z Brassica rapa HOM05D010757 ORTHO05D009635 4.7e-40 167.9 120 75.8
BraA01t03448Z Brassica rapa HOM05D010757 ORTHO05D009635 4.7e-40 167.9 120 75.8
A01p33300 Brassica napus HOM05D010757 ORTHO05D009635 1.5e-38 162.9 120 74.2
Thhalv10022045m.g Eutrema salsugineum HOM05D010757 ORTHO05D009635 1.5e-38 162.9 120 72.5
Sp3g19690 Schrenkiella parvula HOM05D010757 ORTHO05D009635 9.7e-38 160.2 120 70.0
BcaB04g20576 Brassica carinata HOM05D010757 ORTHO05D009635 5.9e-35 151.0 120 70.8
C03p51830 Brassica napus HOM05D010757 ORTHO05D009635 2.9e-34 148.7 120 68.3
BcaC09g49099 Brassica carinata HOM05D010757 ORTHO05D009635 4.7e-32 141.4 102 75.5
BcaB04g19178 Brassica carinata HOM05D010757 ORTHO05D009635 1.4e-23 113.2 133 52.6
Sp7g13570 Schrenkiella parvula HOM05D010757 ORTHO05D009635 1.4e-23 113.2 122 53.3
Thhalv10026860m.g Eutrema salsugineum HOM05D010757 ORTHO05D009635 6.7e-23 110.9 124 54.0
BcaC01g03493 Brassica carinata HOM05D010757 ORTHO05D009635 3.7e-21 105.1 87 69.0
A03p42380 Brassica napus HOM05D010757 ORTHO05D009635 2.1e-16 89.4 69 68.1
BraA03t13390Z Brassica rapa HOM05D010757 ORTHO05D009635 2.1e-16 89.4 69 68.1
QL06p012138 Quercus lobata HOM05D008160 ORTHO05D009635 8.6e-10 67.4 93 49.5
QL08p033125 Quercus lobata HOM05D008160 ORTHO05D009635 8.6e-10 67.4 93 49.5
Ciclev10017235m.g Citrus clementina HOM05D008160 ORTHO05D009635 1.1e-09 67.0 123 38.2
MD09G1108700 Malus domestica HOM05D008160 ORTHO05D009635 3.3e-09 65.5 146 34.9
Glyma.06G305400 Glycine max HOM05D008160 ORTHO05D009635 5.5e-09 64.7 145 32.4
Dinv05432 Davidia involucrata HOM05D008160 ORTHO05D009635 1.8e-07 59.7 77 42.9
Glyma.12G099100 Glycine max HOM05D008160 ORTHO05D009635 5.2e-07 58.2 83 39.8
TPR.G4242 Trifolium pratense HOM05D008160 ORTHO05D009635 2.0e-06 56.2 141 29.1
Haze_12867 Corylus avellana HOM05D008160 ORTHO05D009635 2.6e-06 55.8 70 51.4
Nn1g03539 Nelumbo nucifera HOM05D008160 ORTHO05D009635 2.6e-06 55.8 138 32.6
Prupe.3G217400 Prunus persica HOM05D008160 ORTHO05D009635 3.4e-06 55.5 141 34.0
ClCG02G008690 Citrullus lanatus HOM05D008160 ORTHO05D009635 9.8e-06 53.9 142 32.4


User provided reference genes

Program Settings