Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G35700 Arabidopsis lyrata HOM05D006658 ORTHO05D008515 2.2e-211 738.8 393 100.0
AT3G21580 Arabidopsis thaliana HOM05D006658 ORTHO05D008515 7.2e-199 697.2 394 94.9
Carub.0003s2162 Capsella rubella HOM05D006658 ORTHO05D008515 1.8e-197 692.6 393 94.4
CARHR097540 Cardamine hirsuta HOM05D006658 ORTHO05D008515 2.1e-190 669.1 393 91.3
Sp3g19610 Schrenkiella parvula HOM05D006658 ORTHO05D008515 5.4e-186 654.4 394 90.1
Thhalv10020897m.g Eutrema salsugineum HOM05D006658 ORTHO05D008515 1.0e-184 650.2 390 89.7
BcaB04g19174 Brassica carinata HOM05D006658 ORTHO05D008515 1.6e-182 642.9 395 89.9
A03p42320 Brassica napus HOM05D006658 ORTHO05D008515 8.9e-181 637.1 394 89.6
BraA03t13384Z Brassica rapa HOM05D006658 ORTHO05D008515 8.9e-181 637.1 394 89.6
BcaC01g03498 Brassica carinata HOM05D006658 ORTHO05D008515 1.3e-179 633.3 394 89.6
BolC3t17462H Brassica oleracea HOM05D006658 ORTHO05D008515 1.0e-176 623.6 394 88.6
C03p51780 Brassica napus HOM05D006658 ORTHO05D008515 3.0e-176 622.1 394 88.3
Aa31sc174G10 Aethionema arabicum HOM05D006658 ORTHO05D008515 4.6e-169 598.2 396 81.3
THA.LOC104820222 Tarenaya hassleriana HOM05D006658 ORTHO05D008515 3.9e-160 568.5 392 78.8
Potri.008G199900 Populus trichocarpa HOM05D006658 ORTHO05D008515 9.9e-140 500.7 333 77.8
Cpa.g.sc16.52 Carica papaya HOM05D006658 ORTHO05D008515 4.3e-135 485.3 342 73.7
Sabra08G0161000 Salix brachista HOM05D006658 ORTHO05D008515 5.6e-135 485.0 371 70.6
Ciclev10005116m.g Citrus clementina HOM05D006658 ORTHO05D008515 2.8e-134 482.6 402 66.7
Manes.15G021400 Manihot esculenta HOM05D006658 ORTHO05D008515 6.2e-134 481.5 378 69.3
Gorai.006G218300 Gossypium raimondii HOM05D006658 ORTHO05D008515 6.4e-131 471.5 393 66.2
Atru.chr4.2671 Acer truncatum HOM05D006658 ORTHO05D008515 2.4e-130 469.5 400 64.8
Thecc.04G218900 Theobroma cacao HOM05D006658 ORTHO05D008515 7.9e-129 464.5 361 70.6
CANSAT78G1897 Cannabis sativa HOM05D006658 ORTHO05D008515 1.3e-128 463.8 363 68.0
TWI53G0915 Tripterygium wilfordii HOM05D006658 ORTHO05D008515 2.5e-127 459.5 401 65.1
Cfa015553 Carpinus fangiana HOM05D006658 ORTHO05D008515 1.2e-124 450.7 384 62.8
Haze_00994 Corylus avellana HOM05D006658 ORTHO05D008515 1.2e-124 450.7 330 69.7
PGR065G0004 Punica granatum HOM05D006658 ORTHO05D008515 2.0e-124 449.9 340 69.4
CiPaw.02G090200 Carya illinoinensis HOM05D006658 ORTHO05D008515 3.4e-124 449.1 376 64.1
QL06p005937 Quercus lobata HOM05D006658 ORTHO05D008515 1.0e-123 447.6 356 67.7
TAR365G0289 Trochodendron aralioides HOM05D006658 ORTHO05D008515 2.9e-123 446.0 331 70.7
Prupe.1G148500 Prunus persica HOM05D006658 ORTHO05D008515 1.9e-122 443.4 365 64.1
GSVIVG01017866001 Vitis vinifera HOM05D006658 ORTHO05D008515 1.9e-122 443.4 367 65.9
Dinv38362 Davidia involucrata HOM05D006658 ORTHO05D008515 5.5e-122 441.8 379 63.3
FvH4_4g14170 Fragaria vesca HOM05D006658 ORTHO05D008515 5.5e-122 441.8 378 62.4
FAN12G0854 Fragaria x ananassa HOM05D006658 ORTHO05D008515 9.3e-122 441.0 378 62.4
MBI17_g29609_MAGBIO Magnolia biondii HOM05D006658 ORTHO05D008515 9.3e-122 441.0 368 64.4
Medtr2g021220 Medicago truncatula HOM05D006658 ORTHO05D008515 9.3e-122 441.0 356 64.9
TPR.G28916 Trifolium pratense HOM05D000887 ORTHO05D000908 1.6e-121 440.3 341 67.2
Lalb_Chr15g0087271 Lupinus albus HOM05D006658 ORTHO05D008515 3.5e-121 439.1 399 60.7
PSO170G4721 Papaver somniferum HOM05D006658 ORTHO05D008515 3.5e-121 439.1 359 66.6
Eucgr.E03351 Eucalyptus grandis HOM05D006658 ORTHO05D008515 4.6e-121 438.7 378 60.8
Phvul.006G155900 Phaseolus vulgaris HOM05D006658 ORTHO05D008515 7.9e-121 438.0 362 64.4
Ca_00605_v3 Cicer arietinum L. HOM05D000887 ORTHO05D000908 1.3e-120 437.2 336 67.0
MELO3C021391.2 Cucumis melo HOM05D006658 ORTHO05D008515 1.8e-120 436.8 336 66.1
MD13G1180000 Malus domestica HOM05D006658 ORTHO05D008515 5.1e-120 435.3 365 62.5
ClCG06G005690 Citrullus lanatus HOM05D006658 ORTHO05D008515 2.5e-119 433.0 376 60.6
arahy.Tifrunner.gnm1.ann1.V9Y9T8 Arachis hypogaea HOM05D006658 ORTHO05D008515 5.7e-119 431.8 359 63.0
RcHm_v2.0_Chr4g0419051 Rosa chinensis HOM05D006658 ORTHO05D008515 7.4e-119 431.4 381 60.4
VMungo0540G0090 Vigna mungo HOM05D006658 ORTHO05D008515 1.3e-118 430.6 326 68.1
COL.COLO4_21620 Corchorus olitorius HOM05D006658 ORTHO05D008515 3.7e-118 429.1 361 65.1
vmacro15292 Vaccinium macrocarpon HOM05D006658 ORTHO05D008515 3.7e-118 429.1 327 67.6
Lj6g0017983 Lotus japonicus HOM05D006658 ORTHO05D008515 4.8e-118 428.7 358 64.0
PSO407G0441 Papaver somniferum HOM05D006658 ORTHO05D008515 8.2e-118 427.9 307 72.0
CsaV3_6G005460 Cucumis sativus L. HOM05D006658 ORTHO05D008515 1.1e-117 427.6 375 59.7
Rhsim02G0017700 Rhododendron simsii HOM05D006658 ORTHO05D008515 4.1e-117 425.6 327 67.3
Sed0019307 Sechium edule HOM05D006658 ORTHO05D008515 6.9e-117 424.9 336 64.9
arahy.Tifrunner.gnm1.ann1.Q3CYV3 Arachis hypogaea HOM05D006658 ORTHO05D008515 3.4e-116 422.5 394 58.9
Sc13g0003830 Simmondsia chinensis HOM05D006658 ORTHO05D008515 1.7e-115 420.2 359 61.6
Lsat_1_v5_gn_5_165480 Lactuca sativa HOM05D006658 ORTHO05D008515 2.2e-115 419.9 382 59.9
Actinidia00076 Actinidia chinensis HOM05D006658 ORTHO05D008515 3.8e-115 419.1 322 67.7
Duzib212G0844 Durio zibethinus HOM05D006658 ORTHO05D008515 3.8e-115 419.1 342 67.0
Glyma.15G101900 Glycine max HOM05D006658 ORTHO05D008515 3.8e-115 419.1 326 66.6
HanXRQChr12g0359491 Helianthus annuus HOM05D006658 ORTHO05D008515 1.4e-114 417.2 372 59.4
Aqoxy2G03225 Aquilegia oxysepala HOM05D006658 ORTHO05D008515 2.1e-113 413.3 333 65.5
Cc03_g02920 Coffea canephora HOM05D006658 ORTHO05D008515 2.1e-113 413.3 329 64.7
FAN07G2752 Fragaria x ananassa HOM05D006658 ORTHO05D008515 4.6e-113 412.1 409 56.2
Gohir.D09G194900 Gossypium hirsutum HOM05D006658 ORTHO05D008515 1.9e-111 406.8 393 59.0
DCAR_027140 Daucus carota HOM05D006658 ORTHO05D008515 8.2e-110 401.4 307 68.4
PGSC0003DMG400004353 Solanum tuberosum HOM05D006658 ORTHO05D008515 4.1e-109 399.1 380 57.4
HPP92_001401 Vanilla planifolia HOM05D006658 ORTHO05D008515 5.3e-109 398.7 311 65.6
Solyc01g080300.4 Solanum lycopersicum HOM05D006658 ORTHO05D008515 6.9e-109 398.3 380 57.4
Sopen01g032090 Solanum pennellii HOM05D006658 ORTHO05D008515 9.1e-109 397.9 380 57.1
Gohir.A09G200700 Gossypium hirsutum HOM05D006658 ORTHO05D008515 1.5e-108 397.1 393 58.3
Os05g0400600 Oryza sativa ssp. japonica HOM05D006658 ORTHO05D008515 7.7e-108 394.8 321 62.9
CAN.G522.10 Capsicum annuum HOM05D006658 ORTHO05D008515 2.9e-107 392.9 384 56.2
Peaxi162Scf00095g00723 Petunia axillaris HOM05D006658 ORTHO05D008515 3.8e-107 392.5 354 61.0
MSTRG.24762 Avicennia marina HOM05D006658 ORTHO05D008515 5.0e-107 392.1 335 61.8
Zm00001eb346810 Zea mays HOM05D006658 ORTHO05D008515 3.2e-106 389.4 329 63.8
Migut.N00139 Erythranthe guttata HOM05D006658 ORTHO05D008515 5.5e-106 388.7 322 62.4
Nitab4.5_0003070g0030 Nicotiana tabacum HOM05D006658 ORTHO05D008515 1.0e-104 384.4 421 53.2
Psat5g176560 Pisum sativum HOM05D006658 ORTHO05D008515 3.9e-104 382.5 403 54.3
SalBow5G3198 Salvia bowleyana HOM05D006658 ORTHO05D008515 6.7e-104 381.7 312 63.5
ATR0626G018 Amborella trichopoda HOM05D006658 ORTHO05D007095 1.1e-103 380.9 317 63.4
SGA_v2.0_scaffold107G30765 Striga asiatica HOM05D006658 ORTHO05D008515 1.1e-103 380.9 345 58.0
Nn4g26153 Nelumbo nucifera HOM05D006658 ORTHO05D008515 2.2e-102 376.7 338 60.4
PGR004G0022 Punica granatum HOM05D006658 ORTHO05D008515 1.2e-100 370.9 281 69.0
EL10Ac4g08937 Beta vulgaris HOM05D006658 ORTHO05D008515 6.5e-99 365.2 343 59.5
SEGI_40702 Sequoiadendron giganteum HOM05D006658 ORTHO05D008515 2.6e-95 353.2 327 55.4
FAN22G2256 Fragaria x ananassa HOM05D006658 ORTHO05D008515 7.0e-93 345.1 256 69.5
RcHm_v2.0_Chr2g0086241 Rosa chinensis HOM05D006658 ORTHO05D008515 2.9e-91 339.7 342 57.0
CDE02G1914 Ceratophyllum demersum HOM05D006658 ORTHO05D008515 2.1e-89 333.6 322 55.9
Mapoly0015s0173 Marchantia polymorpha HOM05D006658 ORTHO05D008515 2.2e-86 323.6 304 53.6
ECA234G3592 Erigeron canadensis HOM05D006658 ORTHO05D008515 1.4e-85 320.9 227 71.8
CSS0022396 Camellia sinensis var. sinensis HOM05D006658 ORTHO05D008515 2.0e-84 317.0 251 65.7
AUR62004779 Chenopodium quinoa HOM05D006658 ORTHO05D008515 2.0e-84 317.0 364 51.9
Pp3c16_5660 Physcomitrium patens HOM05D006658 ORTHO05D008515 1.3e-83 314.3 304 52.0
Ah.06g191650 Amaranthus hybridus HOM05D006658 ORTHO05D008515 1.1e-82 311.2 307 57.3
SMO361G0230 Selaginella moellendorffii HOM05D006658 ORTHO05D008515 9.4e-82 308.1 332 49.1
Glyma.13G210900 Glycine max HOM05D006658 ORTHO05D008515 2.2e-78 297.0 279 58.8
unitig_61.g26008 Utricularia gibba HOM05D006658 ORTHO05D008515 2.2e-78 297.0 323 51.1
RcHm_v2.0_Chr5g0064291 Rosa chinensis HOM05D006658 ORTHO05D008515 1.6e-73 280.8 202 71.3
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 2.3e-72 276.9 301 47.2
Lj3A803G20 Lonicera japonica HOM05D006658 ORTHO05D008515 2.0e-71 273.9 303 51.8
Psat1g186040 Pisum sativum HOM05D006658 ORTHO05D008515 4.4e-71 272.7 187 72.7
CDE09G1086 Ceratophyllum demersum HOM05D002356 ORTHO05D002546 1.6e-65 254.2 257 52.9
AUR62003399 Chenopodium quinoa HOM05D006658 ORTHO05D008515 6.1e-65 252.3 271 55.4
RcHm_v2.0_Chr5g0045591 Rosa chinensis HOM05D006658 ORTHO05D008515 9.8e-63 245.0 179 71.5
Hund26050 Selenicereus undatus HOM05D006658 ORTHO05D008515 2.2e-62 243.8 253 56.5
Nn1g02127 Nelumbo nucifera HOM05D006658 ORTHO05D008515 1.5e-58 231.1 200 61.5
CSS0004357 Camellia sinensis var. sinensis HOM05D006658 ORTHO05D008515 1.9e-58 230.7 227 55.9
Manes.07G121800 Manihot esculenta HOM05D006658 ORTHO05D008515 2.5e-58 230.3 163 74.8
Cre12.g533950 Chlamydomonas reinhardtii HOM05D006658 ORTHO05D008515 1.6e-57 227.6 322 39.8
Nitab4.5_0000059g0030 Nicotiana tabacum HOM05D006658 ORTHO05D008979 6.2e-49 199.1 337 44.5
MCO01G250 Micromonas commoda HOM05D006658 ORTHO05D008515 6.6e-43 179.1 249 36.9
PRCOL_00004089 Prasinoderma coloniale HOM05D006658 ORTHO05D008515 5.6e-42 176.0 267 37.5
SEGI_22040 Sequoiadendron giganteum HOM05D006658 ORTHO05D008515 1.3e-38 164.9 137 60.6
HPP92_001340 Vanilla planifolia HOM05D006658 ORTHO05D008515 1.0e-27 128.6 105 65.7
Peaxi162Scf00095g00724 Petunia axillaris HOM05D006658 ORTHO05D008515 5.1e-27 126.3 119 56.3
Psat2g070960 Pisum sativum HOM05D006658 ORTHO05D008515 2.5e-26 124.0 232 39.7
Actinidia32371 Actinidia chinensis HOM05D006658 ORTHO05D008515 1.4e-24 118.2 84 75.0
Actinidia08452 Actinidia chinensis HOM05D006658 ORTHO05D008515 1.7e-22 111.3 84 70.2
Oeu023652.1 Olea europaea HOM05D006658 ORTHO05D008515 3.8e-22 110.2 226 37.6
HanXRQChr09g0256171 Helianthus annuus HOM05D006658 ORTHO05D008515 1.5e-10 71.6 61 57.4
Oeu037664.1 Olea europaea HOM05D006658 ORTHO05D008515 2.5e-10 70.9 85 47.1
HanXRQChr04g0123631 Helianthus annuus HOM05D034347 ORTHO05D227534 1.2e-07 62.0 46 65.2


User provided reference genes

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