Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G35480 Arabidopsis lyrata HOM05D006081 ORTHO05D007628 4.5e-98 361.3 190 100.0
AT3G21400 Arabidopsis thaliana HOM05D006081 ORTHO05D007628 4.9e-92 341.3 190 94.2
CARHR097370 Cardamine hirsuta HOM05D006081 ORTHO05D007628 2.0e-82 309.3 194 85.6
Carub.0003s2143 Capsella rubella HOM05D006081 ORTHO05D007628 1.0e-81 307.0 196 86.7
Thhalv10021583m.g Eutrema salsugineum HOM05D006081 ORTHO05D007628 1.3e-81 306.6 192 85.9
Sp3g19430 Schrenkiella parvula HOM05D006081 ORTHO05D007628 3.0e-81 305.4 193 85.5
C03p51690 Brassica napus HOM05D006081 ORTHO05D007628 5.6e-80 301.2 194 85.1
BcaC01g03506 Brassica carinata HOM05D006081 ORTHO05D007628 3.6e-79 298.5 194 84.0
BolC3t17454H Brassica oleracea HOM05D006081 ORTHO05D007628 3.6e-79 298.5 194 84.0
A03p42230 Brassica napus HOM05D006081 ORTHO05D007628 6.2e-79 297.7 194 85.6
BraA03t13376Z Brassica rapa HOM05D006081 ORTHO05D007628 6.2e-79 297.7 194 85.6
BcaB04g19166 Brassica carinata HOM05D006081 ORTHO05D007628 4.0e-78 295.0 193 84.5
Aa31LG8G8110 Aethionema arabicum HOM05D006081 ORTHO05D007628 4.4e-77 291.6 192 81.8
BcaB06g26235 Brassica carinata HOM05D006081 ORTHO05D007628 8.1e-71 270.8 192 78.6
BcaC05g28170 Brassica carinata HOM05D006081 ORTHO05D007628 2.2e-68 262.7 190 77.9
C05p42070 Brassica napus HOM05D006081 ORTHO05D007628 2.2e-68 262.7 190 77.9
BolC5t32937H Brassica oleracea HOM05D006081 ORTHO05D007628 2.2e-68 262.7 190 77.9
THA.LOC104820251 Tarenaya hassleriana HOM05D006081 ORTHO05D007628 4.2e-59 231.9 192 68.2
BraA05t21612Z Brassica rapa HOM05D006081 ORTHO05D007628 1.6e-58 229.9 169 76.3
A05p27230 Brassica napus HOM05D006081 ORTHO05D007628 7.8e-58 227.6 169 75.7
Gohir.A02G048800 Gossypium hirsutum HOM05D006081 ORTHO05D007628 6.0e-50 201.4 189 59.3
Cpa.g.sc16.161 Carica papaya HOM05D006081 ORTHO05D007628 7.9e-50 201.1 193 58.5
Thecc.04G283000 Theobroma cacao HOM05D006081 ORTHO05D007628 1.7e-49 199.9 187 59.9
Duzib151G0152 Durio zibethinus HOM05D006081 ORTHO05D007628 3.0e-49 199.1 186 58.6
Atru.chr4.2827 Acer truncatum HOM05D006081 ORTHO05D007628 6.6e-49 198.0 183 62.3
Prupe.1G138200 Prunus persica HOM05D006081 ORTHO05D007628 1.9e-48 196.4 197 56.9
Gohir.D02G054100 Gossypium hirsutum HOM05D006081 ORTHO05D007628 3.3e-48 195.7 187 58.3
Gorai.005G059600 Gossypium raimondii HOM05D006081 ORTHO05D007628 3.3e-48 195.7 187 58.3
Manes.15G013500 Manihot esculenta HOM05D006081 ORTHO05D007628 3.3e-48 195.7 188 57.4
Dinv29771 Davidia involucrata HOM05D006081 ORTHO05D007628 7.3e-48 194.5 190 57.9
Lsat_1_v5_gn_5_49301 Lactuca sativa HOM05D006081 ORTHO05D007628 9.6e-48 194.1 189 56.1
Cfa015373 Carpinus fangiana HOM05D006081 ORTHO05D007628 1.3e-47 193.7 190 56.8
Potri.008G210100 Populus trichocarpa HOM05D006081 ORTHO05D007628 1.6e-47 193.4 185 58.4
HanXRQChr03g0079991 Helianthus annuus HOM05D006081 ORTHO05D007628 4.8e-47 191.8 189 56.6
Medtr2g436940 Medicago truncatula HOM05D006081 ORTHO05D007628 4.8e-47 191.8 195 56.4
CSS0030149 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 8.1e-47 191.0 187 56.7
Cc00_g10580 Coffea canephora HOM05D006081 ORTHO05D007628 1.8e-46 189.9 188 56.4
Manes.03G194000 Manihot esculenta HOM05D006081 ORTHO05D007628 2.4e-46 189.5 189 54.0
RcHm_v2.0_Chr4g0421971 Rosa chinensis HOM05D006081 ORTHO05D007628 2.4e-46 189.5 192 54.2
TWI53G0242 Tripterygium wilfordii HOM05D006081 ORTHO05D007628 2.4e-46 189.5 192 56.2
Rhsim04G0220300 Rhododendron simsii HOM05D006081 ORTHO05D007628 9.0e-46 187.6 193 54.4
Ca_01966_v3 Cicer arietinum L. HOM05D006081 ORTHO05D007628 1.2e-45 187.2 193 55.4
Nitab4.5_0003972g0010 Nicotiana tabacum HOM05D006081 ORTHO05D007628 1.5e-45 186.8 188 56.9
TAR636G3617 Trochodendron aralioides HOM05D006081 ORTHO05D007628 1.5e-45 186.8 193 57.0
Eucgr.H03897 Eucalyptus grandis HOM05D006081 ORTHO05D007628 2.0e-45 186.4 185 56.2
Actinidia40266 Actinidia chinensis HOM05D006081 ORTHO05D007628 2.6e-45 186.0 190 55.3
Psat1g153280 Pisum sativum HOM05D006081 ORTHO05D007628 2.6e-45 186.0 194 55.2
arahy.Tifrunner.gnm1.ann1.EZB5Q6 Arachis hypogaea HOM05D006081 ORTHO05D007628 3.4e-45 185.7 190 54.7
MSTRG.21799 Avicennia marina HOM05D006081 ORTHO05D007628 3.4e-45 185.7 188 55.3
Lj6A673G88 Lonicera japonica HOM05D006081 ORTHO05D007628 3.4e-45 185.7 134 67.9
vmacro08134 Vaccinium macrocarpon HOM05D006081 ORTHO05D007628 3.4e-45 185.7 185 55.7
CiPaw.01G149700 Carya illinoinensis HOM05D006081 ORTHO05D007628 4.5e-45 185.3 195 55.9
MD16G1171400 Malus domestica HOM05D006081 ORTHO05D007628 4.5e-45 185.3 185 56.2
FAN07G2255 Fragaria x ananassa HOM05D006081 ORTHO05D007628 5.8e-45 184.9 193 54.9
PGSC0003DMG400022662 Solanum tuberosum HOM05D006081 ORTHO05D007628 5.8e-45 184.9 188 52.1
Ciclev10005978m.g Citrus clementina HOM05D006081 ORTHO05D007628 9.9e-45 184.1 193 56.0
CiPaw.02G083900 Carya illinoinensis HOM05D006081 ORTHO05D007628 1.3e-44 183.7 196 54.6
FvH4_4g17860 Fragaria vesca HOM05D006081 ORTHO05D007628 1.3e-44 183.7 193 54.9
Lj6g0000146 Lotus japonicus HOM05D006081 ORTHO05D007628 1.7e-44 183.3 194 54.6
Solyc01g067080.3 Solanum lycopersicum HOM05D006081 ORTHO05D007628 2.2e-44 183.0 185 53.5
SGA_v2.0_scaffold55G19699 Striga asiatica HOM05D006081 ORTHO05D007628 2.2e-44 183.0 191 55.0
ClCG06G005230 Citrullus lanatus HOM05D006081 ORTHO05D007628 2.9e-44 182.6 193 53.9
Nitab4.5_0003749g0060 Nicotiana tabacum HOM05D006081 ORTHO05D007628 2.9e-44 182.6 188 55.3
Sopen01g028790 Solanum pennellii HOM05D006081 ORTHO05D007628 2.9e-44 182.6 185 53.0
arahy.Tifrunner.gnm1.ann1.TA2ZSY Arachis hypogaea HOM05D006081 ORTHO05D007628 3.8e-44 182.2 190 53.7
Lalb_Chr18g0051761 Lupinus albus HOM05D006081 ORTHO05D007628 3.8e-44 182.2 189 51.9
FAN12G2613 Fragaria x ananassa HOM05D006081 ORTHO05D007628 6.4e-44 181.4 193 54.4
FAN17G1774 Fragaria x ananassa HOM05D006081 ORTHO05D007628 6.4e-44 181.4 193 53.9
Peaxi162Scf00534g00212 Petunia axillaris HOM05D006081 ORTHO05D007628 8.4e-44 181.0 185 53.0
QL06p008580 Quercus lobata HOM05D006081 ORTHO05D007628 8.4e-44 181.0 191 55.5
Sabra08G0154300 Salix brachista HOM05D006081 ORTHO05D007628 1.1e-43 180.6 187 55.6
PGR031G1107 Punica granatum HOM05D006081 ORTHO05D007628 1.4e-43 180.3 189 52.9
VMungo1309G0529 Vigna mungo HOM05D006081 ORTHO05D007628 1.4e-43 180.3 194 53.6
Phvul.009G246800 Phaseolus vulgaris HOM05D006081 ORTHO05D007628 2.4e-43 179.5 192 53.6
Glyma.15G153100 Glycine max HOM05D006081 ORTHO05D007628 3.2e-43 179.1 193 53.4
SalBow5G1281 Salvia bowleyana HOM05D006081 ORTHO05D007628 3.2e-43 179.1 194 52.6
GSVIVG01017744001 Vitis vinifera HOM05D006081 ORTHO05D007628 5.5e-43 178.3 194 53.6
Sed0014998 Sechium edule HOM05D006081 ORTHO05D007628 7.9e-42 174.5 189 52.4
ECA240G0281 Erigeron canadensis HOM05D006081 ORTHO05D007628 1.3e-41 173.7 188 52.1
Lalb_Chr20g0114491 Lupinus albus HOM05D006081 ORTHO05D007628 3.0e-41 172.6 187 52.4
PSO210G2816 Papaver somniferum HOM05D006081 ORTHO05D007628 3.0e-41 172.6 195 52.3
CANSAT78G1428 Cannabis sativa HOM05D006081 ORTHO05D007628 6.7e-41 171.4 195 51.8
Migut.N00097 Erythranthe guttata HOM05D006081 ORTHO05D007628 8.7e-41 171.0 190 48.4
TAR365G0221 Trochodendron aralioides HOM05D006081 ORTHO05D007628 8.7e-41 171.0 182 54.9
PSO170G3586 Papaver somniferum HOM05D006081 ORTHO05D007628 1.1e-40 170.6 196 52.6
TPR.G26808 Trifolium pratense HOM05D006081 ORTHO05D007628 1.1e-40 170.6 127 66.9
MELO3C021343.2 Cucumis melo HOM05D006081 ORTHO05D007628 1.9e-40 169.9 192 52.1
CsaV3_6G017270 Cucumis sativus L. HOM05D006081 ORTHO05D007628 1.9e-40 169.9 192 51.0
Oeu027733.1 Olea europaea HOM05D006081 ORTHO05D007628 2.5e-40 169.5 191 51.3
Glyma.09G045900 Glycine max HOM05D006081 ORTHO05D007628 5.6e-40 168.3 193 51.8
unitig_26.g10542 Utricularia gibba HOM05D006081 ORTHO05D007628 1.6e-39 166.8 179 50.8
CSS0018730 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 1.4e-38 163.7 123 65.9
AUR62043167 Chenopodium quinoa HOM05D006081 ORTHO05D007628 1.8e-38 163.3 134 59.7
DCAR_030534 Daucus carota HOM05D006081 ORTHO05D007628 1.2e-37 160.6 193 48.2
Sc13g0003510 Simmondsia chinensis HOM05D006081 ORTHO05D007628 1.5e-37 160.2 194 47.4
MBI19_g30830_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 2.6e-37 159.5 190 48.4
FAN12G2474 Fragaria x ananassa HOM05D006081 ORTHO05D007628 4.5e-37 158.7 113 68.1
Aqoxy2G03026 Aquilegia oxysepala HOM05D006081 ORTHO05D007628 4.9e-36 155.2 131 62.6
EL10Ac3g06586 Beta vulgaris HOM05D006081 ORTHO05D007628 1.4e-35 153.7 191 46.6
AUR62036825 Chenopodium quinoa HOM05D006081 ORTHO05D007628 4.2e-35 152.1 120 60.0
CAN.G556.12 Capsicum annuum HOM05D006081 ORTHO05D007628 9.3e-35 151.0 113 65.5
Oeu023291.2 Olea europaea HOM05D006081 ORTHO05D007628 1.2e-34 150.6 223 43.9
CDE02G2676 Ceratophyllum demersum HOM05D006081 ORTHO05D000739 4.6e-34 148.7 192 50.0
CDE09G1305 Ceratophyllum demersum HOM05D006081 ORTHO05D007628 1.8e-30 136.7 189 46.0
Os12g0540700 Oryza sativa ssp. japonica HOM05D006081 ORTHO05D007628 2.0e-29 133.3 126 53.2
SEGI_25455 Sequoiadendron giganteum HOM05D006081 ORTHO05D007628 2.2e-28 129.8 182 44.0
ATR0706G092 Amborella trichopoda HOM05D006081 ORTHO05D007628 2.9e-28 129.4 131 55.7
Zm00001eb410420 Zea mays HOM05D006081 ORTHO05D007628 1.2e-26 124.0 195 40.0
TAR365G0700 Trochodendron aralioides HOM05D006081 ORTHO05D007628 5.7e-24 115.2 94 62.8
AUR62038616 Chenopodium quinoa HOM05D006081 ORTHO05D007628 1.6e-23 113.6 93 57.0
HPP92_001321 Vanilla planifolia HOM05D006081 ORTHO05D007628 4.8e-23 112.1 172 41.3
Haze_01224 Corylus avellana HOM05D006081 ORTHO05D007628 2.4e-22 109.8 83 63.9
MD13G1169900 Malus domestica HOM05D006081 ORTHO05D007628 3.4e-21 105.9 129 51.2
MBI19_g12810_MAGBIO Magnolia biondii HOM05D006081 ORTHO05D007628 8.5e-20 101.3 94 53.2
Actinidia01470 Actinidia chinensis HOM05D006081 ORTHO05D007628 1.4e-19 100.5 191 38.7
Potri.010G024000 Populus trichocarpa HOM05D006081 ORTHO05D007628 6.7e-17 91.7 66 66.7
CSS0011440 Camellia sinensis var. sinensis HOM05D006081 ORTHO05D007628 7.4e-16 88.2 109 48.6
Pp3c1_29830 Physcomitrium patens HOM05D006081 ORTHO05D007628 6.3e-15 85.1 124 39.5
Haze_01225 Corylus avellana HOM05D006081 ORTHO05D007628 6.9e-14 81.6 102 50.0
AagrBONN_evm.TU.Sc2ySwM_368.2309 Anthoceros agrestis HOM05D006081 ORTHO05D007628 2.6e-13 79.7 194 29.9
Mapoly0041s0011 Marchantia polymorpha HOM05D006081 ORTHO05D007628 2.2e-12 76.6 178 34.3
BolC7t43135H Brassica oleracea HOM05D006081 ORTHO05D033520 2.7e-10 69.7 42 78.6
CBR_g29894 Chara braunii HOM05D008095 ORTHO05D010826 4.7e-10 68.9 127 31.5
Nn5g30060 Nelumbo nucifera HOM05D006081 ORTHO05D007628 1.0e-09 67.8 101 49.5
FAN22G0279 Fragaria x ananassa HOM05D006081 ORTHO05D007628 2.8e-07 59.7 98 44.9


User provided reference genes

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