Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
AL3G34260 Arabidopsis lyrata HOM05D007013 ORTHO05D008999 2.9e-224 781.6 396 100.0
Carub.0003s2044 Capsella rubella HOM05D007013 ORTHO05D008999 9.5e-191 670.2 396 86.4
Thhalv10020871m.g Eutrema salsugineum HOM05D007013 ORTHO05D008999 3.4e-180 635.2 394 81.7
Sp2g09120 Schrenkiella parvula HOM05D007013 ORTHO05D008999 3.2e-178 628.6 396 81.6
BraA02t07867Z Brassica rapa HOM05D007013 ORTHO05D008999 3.3e-175 618.6 396 79.3
BolC2t10525H Brassica oleracea HOM05D007013 ORTHO05D008999 4.7e-174 614.8 396 78.3
C02p44890 Brassica napus HOM05D007013 ORTHO05D008999 1.1e-173 613.6 396 78.5
BcaB07g30535 Brassica carinata HOM05D007013 ORTHO05D008999 3.8e-171 605.1 393 77.9
A02p28310 Brassica napus HOM05D007013 ORTHO05D008999 3.1e-165 585.5 367 80.4
AT3G20480 Arabidopsis thaliana HOM05D007013 ORTHO05D008999 3.8e-163 578.6 318 90.6
Aa31LG8G7290 Aethionema arabicum HOM05D007013 ORTHO05D008999 4.6e-161 571.6 396 74.0
BcaC03g16648 Brassica carinata HOM05D007013 ORTHO05D008999 3.5e-153 545.4 345 80.0
THA.LOC104825406 Tarenaya hassleriana HOM05D007013 ORTHO05D008999 8.7e-152 540.8 394 68.8
Ciclev10008561m.g Citrus clementina HOM05D007013 ORTHO05D008999 5.5e-130 468.4 392 61.0
MD11G1215400 Malus domestica HOM05D007013 ORTHO05D008999 4.7e-129 465.3 386 60.4
Potri.001G418800 Populus trichocarpa HOM05D007013 ORTHO05D008999 1.0e-128 464.2 392 59.9
Atru.chr2.3453 Acer truncatum HOM05D007013 ORTHO05D008999 3.9e-128 462.2 388 61.3
Cfa020325 Carpinus fangiana HOM05D007013 ORTHO05D008999 3.9e-128 462.2 392 61.7
CiPaw.12G131100 Carya illinoinensis HOM05D007013 ORTHO05D008999 6.7e-128 461.5 388 60.6
Gorai.002G090100 Gossypium raimondii HOM05D007013 ORTHO05D008999 6.7e-128 461.5 390 61.0
Gohir.D01G068100 Gossypium hirsutum HOM05D007013 ORTHO05D008999 1.5e-127 460.3 390 61.0
FvH4_3g19730 Fragaria vesca HOM05D007013 ORTHO05D008999 2.0e-127 459.9 385 61.6
Duzib213G0396 Durio zibethinus HOM05D007013 ORTHO05D008999 1.7e-126 456.8 391 59.6
CANSAT11G0669 Cannabis sativa HOM05D007013 ORTHO05D008999 8.2e-126 454.5 387 59.2
RcHm_v2.0_Chr5g0033071 Rosa chinensis HOM05D007013 ORTHO05D008999 5.3e-125 451.8 383 59.5
TWI38G0247 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 7.0e-125 451.4 392 57.9
QL08p009594 Quercus lobata HOM05D007013 ORTHO05D008999 4.5e-124 448.7 393 59.3
Thecc.07G033700 Theobroma cacao HOM05D007013 ORTHO05D008999 2.2e-123 446.4 394 59.4
GSVIVG01037670001 Vitis vinifera HOM05D007013 ORTHO05D008999 2.9e-123 446.0 399 58.9
Eucgr.F03478 Eucalyptus grandis HOM05D007013 ORTHO05D008999 3.2e-122 442.6 402 57.2
Hma1.2p1_0036F.1_g023520 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 5.5e-122 441.8 399 58.4
TPR.G33766 Trifolium pratense HOM05D007013 ORTHO05D008999 1.2e-121 440.7 397 58.9
Glyma.08G318300 Glycine max HOM05D007013 ORTHO05D008999 1.0e-120 437.6 385 58.2
Medtr3g052590 Medicago truncatula HOM05D007013 ORTHO05D008999 1.4e-120 437.2 396 56.3
TAR624G0955 Trochodendron aralioides HOM05D007013 ORTHO05D008999 3.0e-120 436.0 394 57.6
vmacro02226 Vaccinium macrocarpon HOM05D007013 ORTHO05D008999 8.8e-120 434.5 399 57.4
FAN16G1225 Fragaria x ananassa HOM05D007013 ORTHO05D008999 9.7e-119 431.0 384 59.1
Lj6g0002864 Lotus japonicus HOM05D007013 ORTHO05D008999 4.8e-118 428.7 396 55.8
Psat5g177160 Pisum sativum HOM05D007013 ORTHO05D008999 4.8e-118 428.7 385 57.7
Actinidia05088 Actinidia chinensis HOM05D007013 ORTHO05D008999 1.1e-117 427.6 396 57.1
CSS0027260 Camellia sinensis var. sinensis HOM05D007013 ORTHO05D008999 2.0e-116 423.3 396 55.8
MELO3C013155.2 Cucumis melo HOM05D007013 ORTHO05D008999 3.5e-116 422.5 385 56.6
VMungo0540G0725 Vigna mungo HOM05D007013 ORTHO05D008999 3.5e-116 422.5 385 56.1
Lalb_Chr18g0049881 Lupinus albus HOM05D007013 ORTHO05D008999 5.9e-116 421.8 383 57.4
CsaV3_7G021910 Cucumis sativus L. HOM05D007013 ORTHO05D008999 3.8e-115 419.1 389 55.5
CAN.G337.80 Capsicum annuum HOM05D007013 ORTHO05D008999 8.5e-115 417.9 396 55.6
arahy.Tifrunner.gnm1.ann1.YL2AFE Arachis hypogaea HOM05D007013 ORTHO05D008999 5.5e-114 415.2 400 53.5
Nitab4.5_0002287g0070 Nicotiana tabacum HOM05D007013 ORTHO05D008999 9.4e-114 414.5 398 55.3
Haze_09698 Corylus avellana HOM05D007013 ORTHO05D008999 1.2e-113 414.1 362 60.2
Cpa.g.sc12.289 Carica papaya HOM05D007013 ORTHO05D008999 2.1e-113 413.3 389 55.0
EL10Ac4g07781 Beta vulgaris HOM05D007013 ORTHO05D008999 4.7e-113 412.1 392 53.1
MSTRG.14440 Avicennia marina HOM05D007013 ORTHO05D008999 8.0e-113 411.4 396 52.5
Hund01977 Selenicereus undatus HOM05D007013 ORTHO05D008999 8.0e-113 411.4 390 52.3
PSO541G1885 Papaver somniferum HOM05D007013 ORTHO05D008999 1.0e-112 411.0 393 53.9
Nitab4.5_0005590g0010 Nicotiana tabacum HOM05D007013 ORTHO05D008999 1.8e-112 410.2 398 55.0
Oeu034036.2 Olea europaea HOM05D007013 ORTHO05D008999 2.3e-112 409.8 393 53.7
ECA240G2937 Erigeron canadensis HOM05D007013 ORTHO05D008999 8.8e-112 407.9 390 53.6
Peaxi162Scf00235g00319 Petunia axillaris HOM05D007013 ORTHO05D008999 8.8e-112 407.9 416 52.2
Solyc07g064710.3 Solanum lycopersicum HOM05D007013 ORTHO05D008999 2.0e-111 406.8 396 54.3
COL.COLO4_09677 Corchorus olitorius HOM05D007013 ORTHO05D008999 4.4e-111 405.6 344 58.4
HanXRQChr03g0076401 Helianthus annuus HOM05D007013 ORTHO05D008999 4.4e-111 405.6 392 51.8
Cc05_g13940 Coffea canephora HOM05D007013 ORTHO05D008999 7.5e-111 404.8 393 54.5
Migut.H01815 Erythranthe guttata HOM05D007013 ORTHO05D008999 2.2e-110 403.3 394 52.5
PSO675G8214 Papaver somniferum HOM05D007013 ORTHO05D008999 2.8e-110 402.9 403 51.9
Sabra16G0284300 Salix brachista HOM05D007013 ORTHO05D008999 6.3e-110 401.7 391 54.2
Aqoxy1G02096 Aquilegia oxysepala HOM05D007013 ORTHO05D008999 1.4e-109 400.6 395 52.4
Nn1g07163 Nelumbo nucifera HOM05D007013 ORTHO05D008999 4.1e-109 399.1 363 55.9
Manes.15G070387 Manihot esculenta HOM05D007013 ORTHO05D008999 1.6e-108 397.1 316 62.7
Ah.06g182900 Amaranthus hybridus HOM05D007013 ORTHO05D008999 3.5e-108 396.0 387 51.7
Ca_14746_v3 Cicer arietinum L. HOM05D007013 ORTHO05D008999 5.9e-108 395.2 336 57.7
Sc16g0005930 Simmondsia chinensis HOM05D007013 ORTHO05D008999 1.9e-106 390.2 386 51.8
ClCG09G010880 Citrullus lanatus HOM05D007013 ORTHO05D008999 2.7e-105 386.3 392 50.8
AUR62020414 Chenopodium quinoa HOM05D007013 ORTHO05D008999 1.0e-104 384.4 361 53.5
unitig_578.g16279 Utricularia gibba HOM05D001434 ORTHO05D008999 1.0e-104 384.4 385 50.9
DCAR_012723 Daucus carota HOM05D007013 ORTHO05D008999 3.4e-103 379.4 396 51.0
Sed0023076 Sechium edule HOM05D007013 ORTHO05D008999 7.5e-103 378.3 344 55.2
HPP92_012407 Vanilla planifolia HOM05D007013 ORTHO05D008999 2.0e-100 370.2 394 48.5
Sopen07g032910 Solanum pennellii HOM05D007013 ORTHO05D008999 2.7e-100 369.8 351 55.0
FAN11G2199 Fragaria x ananassa HOM05D007013 ORTHO05D008999 8.6e-99 364.8 385 52.7
Hma1.2p1_0036F.1_g023530 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 1.1e-98 364.4 324 59.3
Lsat_1_v5_gn_9_93121 Lactuca sativa HOM05D007013 ORTHO05D008999 5.5e-98 362.1 392 50.8
Prupe.4G215900 Prunus persica HOM05D007013 ORTHO05D008999 3.6e-97 359.4 375 52.5
CARHR096240 Cardamine hirsuta HOM05D007013 ORTHO05D008999 8.9e-96 354.8 220 81.8
arahy.Tifrunner.gnm1.ann1.PYQ1JD Arachis hypogaea HOM05D007013 ORTHO05D008999 2.0e-92 343.6 315 54.9
SGA_v2.0_scaffold363G49936 Striga asiatica HOM05D007013 ORTHO05D008999 2.7e-92 343.2 426 43.9
ATR0794G085 Amborella trichopoda HOM05D007013 ORTHO05D008999 1.3e-91 340.9 316 57.0
Phvul.006G045700 Phaseolus vulgaris HOM05D007013 ORTHO05D008999 1.4e-88 330.9 298 56.7
Mapoly0002s0307 Marchantia polymorpha HOM05D007013 ORTHO05D008999 1.5e-82 310.8 388 44.8
Dinv22254 Davidia involucrata HOM05D007013 ORTHO05D008999 6.2e-81 305.4 266 59.0
AUR62015801 Chenopodium quinoa HOM05D007013 ORTHO05D008999 2.6e-79 300.1 294 51.4
Gohir.A01G080900 Gossypium hirsutum HOM05D007013 ORTHO05D008999 1.6e-76 290.8 238 61.8
SMO367G1261 Selaginella moellendorffii HOM05D007013 ORTHO05D008999 3.5e-76 289.7 372 41.7
Lj1A874G27 Lonicera japonica HOM05D007013 ORTHO05D008999 7.8e-76 288.5 295 50.8
PGSC0003DMG400022313 Solanum tuberosum HOM05D007013 ORTHO05D008999 1.0e-75 288.1 284 52.1
Rhsim06G0218600 Rhododendron simsii HOM05D007013 ORTHO05D008999 8.9e-72 275.0 266 54.1
SEGI_14581 Sequoiadendron giganteum HOM05D007013 ORTHO05D008999 4.9e-62 242.7 239 54.8
Glyma.18G095300 Glycine max HOM05D007013 ORTHO05D008999 2.1e-52 210.7 218 50.5
Zm00001eb030850 Zea mays HOM05D007013 ORTHO05D008999 3.9e-51 206.5 208 52.9
Pp3c19_1630 Physcomitrium patens HOM05D007013 ORTHO05D008999 4.2e-45 186.4 393 33.1
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.5e-44 183.3 381 33.9
Os07g0102000 Oryza sativa ssp. japonica HOM05D007013 ORTHO05D008999 3.9e-43 179.9 196 46.9
Glyma.18G095150 Glycine max HOM05D007013 ORTHO05D008999 1.5e-39 167.9 277 38.6
CBR_g39764 Chara braunii HOM05D007013 ORTHO05D008999 1.0e-38 165.2 361 30.5
FAN16G0901 Fragaria x ananassa HOM05D007013 ORTHO05D008999 1.9e-29 134.4 99 68.7
CDE05G3055 Ceratophyllum demersum HOM05D007013 ORTHO05D008999 4.6e-28 129.8 235 36.6
TWI34G0353 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 1.4e-21 108.2 134 44.0
RcHm_v2.0_Chr4g0424981 Rosa chinensis HOM05D007013 ORTHO05D008999 8.8e-19 99.0 110 48.2
Zm00001eb030810 Zea mays HOM05D007013 ORTHO05D008999 1.5e-10 71.6 68 54.4
Medtr0152s0030 Medicago truncatula HOM05D007013 ORTHO05D008999 4.8e-09 66.6 99 38.4
SEGI_13858 Sequoiadendron giganteum HOM05D007013 ORTHO05D008999 1.2e-07 62.0 89 37.1
Rhsim06G0218700 Rhododendron simsii HOM05D007013 ORTHO05D008999 1.5e-07 61.6 48 54.2


User provided reference genes

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